RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 TLL1O43897 1013 aa10.12□□□□□ -0.79
SF3B2-201ENST00000322535 TADA2AO75478 443 aa10.12□□□□□ -0.79
SF3B2-201ENST00000322535 DNTTP04053 509 aa10.12□□□□□ -0.79
SF3B2-201ENST00000322535 HTR1AP08908 422 aa10.12□□□□□ -0.79
SF3B2-201ENST00000322535 JUNBP17275 347 aaPredicted RBP10.12□□□□□ -0.79
SF3B2-201ENST00000322535 IL12RB1P42701 662 aa10.12□□□□□ -0.79
SF3B2-201ENST00000322535 HOXA1P49639 335 aaPredicted RBP10.12□□□□□ -0.79
SF3B2-201ENST00000322535 GDI2P50395 445 aaKnown RBP10.12□□□□□ -0.79
SF3B2-201ENST00000322535 SERPINB9P50453 376 aa10.12□□□□□ -0.79
SF3B2-201ENST00000322535 TBX4P57082 545 aa10.12□□□□□ -0.79
SF3B2-201ENST00000322535 SESN2P58004 480 aaPredicted RBP10.12□□□□□ -0.79
SF3B2-201ENST00000322535 MLLT1Q03111 559 aaPredicted RBP10.12□□□□□ -0.79
SF3B2-201ENST00000322535 CAPRIN1Q14444 709 aaKnown RBP10.12□□□□□ -0.79
SF3B2-201ENST00000322535 BCL7AQ4VC05 210 aa10.12□□□□□ -0.79
SF3B2-201ENST00000322535 TMCO2Q7Z6W1 182 aaPredicted RBP10.12□□□□□ -0.79
SF3B2-201ENST00000322535 TRIM48Q8IWZ4 208 aa10.12□□□□□ -0.79
SF3B2-201ENST00000322535 KDM1BQ8NB78 822 aa10.12□□□□□ -0.79
SF3B2-201ENST00000322535 SLC22A17Q8WUG5 538 aa10.12□□□□□ -0.79
SF3B2-201ENST00000322535 PTP4A1Q93096 173 aa10.12□□□□□ -0.79
SF3B2-201ENST00000322535 PIWIL1Q96J94 861 aaKnown RBP10.12□□□□□ -0.79
SF3B2-201ENST00000322535 ESRP2Q9H6T0 727 aaKnown RBP10.12□□□□□ -0.79
SF3B2-201ENST00000322535 AGPAT4Q9NRZ5 378 aa10.12□□□□□ -0.79
SF3B2-201ENST00000322535 B3GNT2Q9NY97 397 aa10.12□□□□□ -0.79
SF3B2-201ENST00000322535 A0A1B0GWJ7 208 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 CCDC78A2IDD5 438 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 ZNF487B1APH4 448 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 DFFAO00273 331 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 ARHGEF9O43307 516 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 CLN5O75503 358 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 PTTG1O95997 202 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 PSMA2P25787 234 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 ADORA2BP29275 332 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 PBX3P40426 434 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 NOMO3P69849 1222 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 RBP5P82980 135 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 PPP1R8Q12972 351 aaKnown RBP10.11□□□□□ -0.79
SF3B2-201ENST00000322535 SLAMF1Q13291 335 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 RAB6CQ53S08 254 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 CYB5R2Q6BCY4 276 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 C16orf62Q7Z3J2 963 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 CTU1Q7Z7A3 348 aaKnown RBP10.11□□□□□ -0.79
SF3B2-201ENST00000322535 P2RY8Q86VZ1 359 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 PACRGLQ8N7B6 248 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 CNTD1Q8N815 330 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 PCSK9Q8NBP7 692 aaKnown RBP10.11□□□□□ -0.79
SF3B2-201ENST00000322535 C3orf58Q8NDZ4 430 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 NDRG1Q92597 394 aaKnown RBP10.11□□□□□ -0.79
SF3B2-201ENST00000322535 TMEM68Q96MH6 324 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 UHRF1Q96T88 793 aaPredicted RBP10.11□□□□□ -0.79
SF3B2-201ENST00000322535 ACTR6Q9GZN1 396 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 RAB6CQ9H0N0 254 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.11□□□□□ -0.79
SF3B2-201ENST00000322535 PDE10AQ9Y233 779 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 BTBD3Q9Y2F9 522 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 HSPE1-MOB4S4R3N1 261 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 A0A1W2PRQ8 180 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 ZNF99A8MXY4 864 aaPredicted RBP10.11□□□□□ -0.79
SF3B2-201ENST00000322535 H0Y626 953 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 M0QYV0 167 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 CLDN5O00501 218 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 TRIM13O60858 407 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 URODP06132 367 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 CKBP12277 381 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 HOXC8P31273 242 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 GRIA4P48058 902 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 MEOX2P50222 304 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 GATMP50440 423 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 AP1S2P56377 157 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 BCAR1P56945 870 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 DEFA1P59665 94 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 DEFA3P59666 94 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 FASTKQ14296 549 aaKnown RBP10.11□□□□□ -0.79
SF3B2-201ENST00000322535 SURF1Q15526 300 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 KYAT1Q16773 422 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 SOWAHAQ2M3V2 549 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 DCAF4L1Q3SXM0 396 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 CDKL4Q5MAI5 379 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 SAMD4BQ5PRF9 694 aaKnown RBP10.11□□□□□ -0.79
SF3B2-201ENST00000322535 C9orf57Q5W0N0 161 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 LETMD1Q6P1Q0 360 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 NRARPQ7Z6K4 114 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 DMRTC2Q8IXT2 367 aaPredicted RBP10.11□□□□□ -0.79
SF3B2-201ENST00000322535 UBE2J2Q8N2K1 259 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 URGCPQ8TCY9 931 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 RORBQ92753 470 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 ATOH1Q92858 354 aaPredicted RBP10.11□□□□□ -0.79
SF3B2-201ENST00000322535 LRRC39Q96DD0 335 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 NODALQ96S42 347 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 CEP41Q9BYV8 373 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 MS4A7Q9GZW8 240 aaPredicted RBP10.11□□□□□ -0.79
SF3B2-201ENST00000322535 NUAK2Q9H093 628 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 PCDHB16Q9NRJ7 776 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 CCM2LQ9NUG4 571 aaPredicted RBP10.11□□□□□ -0.79
SF3B2-201ENST00000322535 PAK1IP1Q9NWT1 392 aaPredicted RBP10.11□□□□□ -0.79
SF3B2-201ENST00000322535 GTSE1Q9NYZ3 720 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 NPAP1Q9NZP6 1156 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 TRMT6Q9UJA5 497 aaKnown RBP10.11□□□□□ -0.79
SF3B2-201ENST00000322535 SLC6A14Q9UN76 642 aa10.11□□□□□ -0.79
SF3B2-201ENST00000322535 ARL5CA6NH57 179 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 TTLL8A6PVC2 850 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms