RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 AREL1O15033 823 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 PRAMEF11O60813 436 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 ITGA2P17301 1181 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 GGT1P19440 569 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 PPIBP23284 216 aaKnown RBP12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 ITPKAP23677 461 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 MAP2K4P45985 399 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 TUFMP49411 452 aaKnown RBP12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 APLP1P51693 650 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 COPZ1P61923 177 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 USP50Q70EL3 339 aaPredicted RBP12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 EIF3MQ7L2H7 374 aaKnown RBP12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 ZNF641Q96N77 438 aaPredicted RBP12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 CAMKK2Q96RR4 588 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 PAAF1Q9BRP4 392 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 ERVK-18Q9QC07 812 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 PCTPQ9UKL6 214 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 OR6C75A6NL08 312 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 RPLP0P05388 317 aaKnown RBP12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 MATN1P21941 496 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 ADRA1AP35348 466 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 ALDH7A1P49419 539 aaKnown RBP12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 ABHD18Q0P651 414 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 CNTN1Q12860 1018 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 TIGD6Q17RP2 521 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 ZNF404Q494X3 552 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 XKR6Q5GH73 641 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 ZC3H12BQ5HYM0 836 aaKnown RBP12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 OTUD1Q5VV17 481 aaPredicted RBP12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 GPR156Q8NFN8 814 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 KCNJ9Q92806 393 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 FUBP1Q96AE4 644 aaKnown RBP12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 TMEM159Q96B96 161 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 MOV10Q9HCE1 1003 aaKnown RBP12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 POLE4Q9NR33 117 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 AASDHPPTQ9NRN7 309 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 KCTD5Q9NXV2 234 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 KIAA1217Q5T5P2 1943 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 PLK4O00444 970 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 TBL1XO60907 577 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 TRBC1P01850 177 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 PRSS56P0CW18 603 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 ARNTP27540 789 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 PRDX3P30048 256 aaKnown RBP12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 ZNF157P51786 506 aaPredicted RBP12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 USP39Q53GS9 565 aaKnown RBP12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 UBXN11Q5T124 520 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 TYW3Q6IPR3 259 aaKnown RBP12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 ITIH5Q86UX2 942 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 SUSD3Q96L08 255 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 UHRF1Q96T88 793 aaPredicted RBP12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 EMILIN2Q9BXX0 1053 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 HSFX1Q9UBD0 423 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 SCML2Q9UQR0 700 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 TMA7Q9Y2S6 64 aaKnown RBP12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 TESMINQ9Y4I5 508 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 PCDHGA8Q9Y5G5 932 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 PCDHGA11Q9Y5H2 935 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 GLYATL1P3A0A0U1RQE8 302 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 KRBA1A5PL33 1030 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 TARM1B6A8C7 271 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 OR1I1O60431 355 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 FPR1P21462 350 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 HTR6P50406 440 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 TRIQKQ629K1 86 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 PDE12Q6L8Q7 609 aaKnown RBP12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 USP43Q70EL4 1123 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 OR52J3Q8NH60 311 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 CSGALNACT1Q8TDX6 532 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 OTUB1Q96FW1 271 aaPredicted RBP12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 ZNF385DQ9H6B1 395 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 SLAMF8Q9P0V8 285 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 MAPRE3Q9UPY8 281 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 ZNF510Q9Y2H8 683 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 DYRK1BQ9Y463 629 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 MAGEB17A8MXT2 336 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 PSMD11O00231 422 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 LZTS3O60299 673 aaPredicted RBP12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 CCNDBP1O95273 360 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 EFNA1P20827 205 aaPredicted RBP12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 PBLDP30039 288 aaPredicted RBP12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 IL12RB1P42701 662 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 PSMD8P48556 350 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 ZFP69Q49AA0 526 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 ZZZ3Q8IYH5 903 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 ATOH8Q96SQ7 321 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 GTF2IRD1Q9UHL9 959 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 VPS4AQ9UN37 437 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 PCDHA9Q9Y5H5 950 aa12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 OAS3Q9Y6K5 1087 aaKnown RBP12.49□□□□□ -0.41
DNMT3A-202ENST00000321117 MT-ND2P03891 347 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 KCNC1P48547 511 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 ACOX1Q15067 660 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 VARS2Q5ST30 1063 aaKnown RBP12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 CPTPQ5TA50 214 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 ANKRD13BQ86YJ7 626 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 GATAD2AQ86YP4 633 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 HS3ST5Q8IZT8 346 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 OR10T2Q8NGX3 314 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 IGSF8Q969P0 613 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms