RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 FOLR1P15328 257 aa28.28■■■□□ 2.12
SYNGR1-202ENST00000318801 CHRM3P20309 590 aa28.28■■■□□ 2.12
SYNGR1-202ENST00000318801 KCNAB1Q14722 419 aa28.28■■■□□ 2.12
SYNGR1-202ENST00000318801 ZNF470Q6ECI4 717 aa28.28■■■□□ 2.12
SYNGR1-202ENST00000318801 LPGAT1Q92604 370 aa28.28■■■□□ 2.12
SYNGR1-202ENST00000318801 C20orf96Q9NUD7 363 aaPredicted RBP28.28■■■□□ 2.12
SYNGR1-202ENST00000318801 LNPEPQ9UIQ6 1025 aa28.28■■■□□ 2.12
SYNGR1-202ENST00000318801 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.28■■■□□ 2.12
SYNGR1-202ENST00000318801 SLC9B1P1A6NJY1 282 aa28.27■■■□□ 2.12
SYNGR1-202ENST00000318801 TK2O00142 265 aa28.27■■■□□ 2.12
SYNGR1-202ENST00000318801 TTC4O95801 387 aa28.27■■■□□ 2.12
SYNGR1-202ENST00000318801 EBLN1P0CF75 366 aa28.27■■■□□ 2.12
SYNGR1-202ENST00000318801 IZUMO3Q5VZ72 239 aa28.27■■■□□ 2.12
SYNGR1-202ENST00000318801 UNC5AQ6ZN44 842 aa28.27■■■□□ 2.12
SYNGR1-202ENST00000318801 ADGRF3Q8IZF5 1079 aa28.27■■■□□ 2.12
SYNGR1-202ENST00000318801 RAB42Q8N4Z0 105 aa28.27■■■□□ 2.12
SYNGR1-202ENST00000318801 SIGLEC10Q96LC7 697 aa28.27■■■□□ 2.12
SYNGR1-202ENST00000318801 KCND1Q9NSA2 647 aa28.27■■■□□ 2.12
SYNGR1-202ENST00000318801 ACTR10Q9NZ32 417 aa28.27■■■□□ 2.12
SYNGR1-202ENST00000318801 ICKQ9UPZ9 632 aa28.27■■■□□ 2.12
SYNGR1-202ENST00000318801 CDYLQ9Y232 598 aa28.27■■■□□ 2.12
SYNGR1-202ENST00000318801 BTRCQ9Y297 605 aa28.27■■■□□ 2.12
SYNGR1-202ENST00000318801 PCDHGA4Q9Y5G9 962 aa28.27■■■□□ 2.12
SYNGR1-202ENST00000318801 NDC80O14777 642 aa28.26■■■□□ 2.12
SYNGR1-202ENST00000318801 ATXN7O15265 892 aaPredicted RBP28.26■■■□□ 2.12
SYNGR1-202ENST00000318801 KIAA0754O94854 1291 aa28.26■■■□□ 2.12
SYNGR1-202ENST00000318801 PTGIRP43119 386 aa28.26■■■□□ 2.12
SYNGR1-202ENST00000318801 MORF4L2Q15014 288 aa28.26■■■□□ 2.12
SYNGR1-202ENST00000318801 DCUN1D3Q8IWE4 304 aa28.26■■■□□ 2.12
SYNGR1-202ENST00000318801 PDIK1LQ8N165 341 aa28.26■■■□□ 2.12
SYNGR1-202ENST00000318801 SERBP1Q8NC51 408 aaKnown RBP eCLIP28.26■■■□□ 2.12
SYNGR1-202ENST00000318801 LKAAEAR1Q8TD35 194 aa28.26■■■□□ 2.12
SYNGR1-202ENST00000318801 MAGEC3Q8TD91 643 aa28.26■■■□□ 2.12
SYNGR1-202ENST00000318801 WBP1Q96G27 269 aa28.26■■■□□ 2.12
SYNGR1-202ENST00000318801 BIRC8Q96P09 236 aa28.26■■■□□ 2.12
SYNGR1-202ENST00000318801 DLGAP3O95886 979 aa28.25■■■□□ 2.11
SYNGR1-202ENST00000318801 PGAM1P18669 254 aa28.25■■■□□ 2.11
SYNGR1-202ENST00000318801 CASQ1P31415 396 aa28.25■■■□□ 2.11
SYNGR1-202ENST00000318801 VRK3Q8IV63 474 aa28.25■■■□□ 2.11
SYNGR1-202ENST00000318801 SLC22A18Q96BI1 424 aa28.25■■■□□ 2.11
SYNGR1-202ENST00000318801 FAM167BQ9BTA0 163 aa28.25■■■□□ 2.11
SYNGR1-202ENST00000318801 PADI1Q9ULC6 663 aa28.25■■■□□ 2.11
SYNGR1-202ENST00000318801 SLC39A10Q9ULF5 831 aa28.25■■■□□ 2.11
SYNGR1-202ENST00000318801 FAM169AQ9Y6X4 670 aa28.25■■■□□ 2.11
SYNGR1-202ENST00000318801 LOC400499M0QZD8 3231 aa28.25■■■□□ 2.11
SYNGR1-202ENST00000318801 ZCWPW2A0A1B0GU75 182 aa28.24■■■□□ 2.11
SYNGR1-202ENST00000318801 CHRM5P08912 532 aaPredicted RBP28.24■■■□□ 2.11
SYNGR1-202ENST00000318801 PKMP14618 531 aaKnown RBP28.24■■■□□ 2.11
SYNGR1-202ENST00000318801 LIFP15018 202 aa28.24■■■□□ 2.11
SYNGR1-202ENST00000318801 RAB28P51157 221 aa28.24■■■□□ 2.11
SYNGR1-202ENST00000318801 KIR2DS3Q14952 304 aa28.24■■■□□ 2.11
SYNGR1-202ENST00000318801 SOWAHCQ53LP3 525 aaPredicted RBP28.24■■■□□ 2.11
SYNGR1-202ENST00000318801 SPESP1Q6UW49 350 aa28.24■■■□□ 2.11
SYNGR1-202ENST00000318801 CENPUQ71F23 418 aa28.24■■■□□ 2.11
SYNGR1-202ENST00000318801 TIPARPQ7Z3E1 657 aaKnown RBP28.24■■■□□ 2.11
SYNGR1-202ENST00000318801 N4BP2L2Q92802 583 aaPredicted RBP28.24■■■□□ 2.11
SYNGR1-202ENST00000318801 RAB11FIP5Q9BXF6 653 aa28.24■■■□□ 2.11
SYNGR1-202ENST00000318801 PITPNM3Q9BZ71 974 aa28.24■■■□□ 2.11
SYNGR1-202ENST00000318801 SERTAD3Q9UJW9 196 aa28.24■■■□□ 2.11
SYNGR1-202ENST00000318801 ITGB2P05107 769 aa28.24■■■□□ 2.11
SYNGR1-202ENST00000318801 CCNFP41002 786 aa28.24■■■□□ 2.11
SYNGR1-202ENST00000318801 MC1RQ01726 317 aa28.24■■■□□ 2.11
SYNGR1-202ENST00000318801 SRSF6Q13247 344 aaKnown RBP28.24■■■□□ 2.11
SYNGR1-202ENST00000318801 TTLL9Q3SXZ7 439 aa28.24■■■□□ 2.11
SYNGR1-202ENST00000318801 CTSL3PQ5NE16 218 aa28.24■■■□□ 2.11
SYNGR1-202ENST00000318801 KIAA1614Q5VZ46 1190 aa28.24■■■□□ 2.11
SYNGR1-202ENST00000318801 TMEM126BQ8IUX1 230 aa28.24■■■□□ 2.11
SYNGR1-202ENST00000318801 GALNT6Q8NCL4 622 aa28.24■■■□□ 2.11
SYNGR1-202ENST00000318801 RAD51AP1Q96B01 352 aa28.24■■■□□ 2.11
SYNGR1-202ENST00000318801 TRIM56Q9BRZ2 755 aaKnown RBP28.24■■■□□ 2.11
SYNGR1-202ENST00000318801 COMMD10Q9Y6G5 202 aa28.24■■■□□ 2.11
SYNGR1-202ENST00000318801 ZNF891A8MT65 544 aaPredicted RBP28.23■■■□□ 2.11
SYNGR1-202ENST00000318801 ISM1B1AKI9 464 aa28.23■■■□□ 2.11
SYNGR1-202ENST00000318801 S1PR4O95977 384 aa28.23■■■□□ 2.11
SYNGR1-202ENST00000318801 ZNF28P17035 718 aa28.23■■■□□ 2.11
SYNGR1-202ENST00000318801 STAT5AP42229 794 aa28.23■■■□□ 2.11
SYNGR1-202ENST00000318801 PWWP2BQ6NUJ5 590 aa28.23■■■□□ 2.11
SYNGR1-202ENST00000318801 FBXO38Q6PIJ6 1188 aa28.23■■■□□ 2.11
SYNGR1-202ENST00000318801 SLC39A7Q92504 469 aa28.23■■■□□ 2.11
SYNGR1-202ENST00000318801 SLC45A3Q96JT2 553 aa28.23■■■□□ 2.11
SYNGR1-202ENST00000318801 EBNA1BP2Q99848 306 aaKnown RBP28.23■■■□□ 2.11
SYNGR1-202ENST00000318801 ARHGAP9Q9BRR9 750 aa28.23■■■□□ 2.11
SYNGR1-202ENST00000318801 IL1RAPL1Q9NZN1 696 aa28.23■■■□□ 2.11
SYNGR1-202ENST00000318801 NIPSNAP2O75323 286 aa28.22■■■□□ 2.11
SYNGR1-202ENST00000318801 MSL3P1P0C860 447 aa28.22■■■□□ 2.11
SYNGR1-202ENST00000318801 ATP5DP30049 168 aa28.22■■■□□ 2.11
SYNGR1-202ENST00000318801 ETF1P62495 437 aaKnown RBP28.22■■■□□ 2.11
SYNGR1-202ENST00000318801 CTBP1Q13363 440 aa28.22■■■□□ 2.11
SYNGR1-202ENST00000318801 GPR19Q15760 415 aa28.22■■■□□ 2.11
SYNGR1-202ENST00000318801 KYNUQ16719 465 aa28.22■■■□□ 2.11
SYNGR1-202ENST00000318801 BBS9Q3SYG4 887 aa28.22■■■□□ 2.11
SYNGR1-202ENST00000318801 SPANXN3Q5MJ09 141 aa28.22■■■□□ 2.11
SYNGR1-202ENST00000318801 ZBTB2Q8N680 514 aa28.22■■■□□ 2.11
SYNGR1-202ENST00000318801 TCTN2Q96GX1 697 aa28.22■■■□□ 2.11
SYNGR1-202ENST00000318801 SNF8Q96H20 258 aa28.22■■■□□ 2.11
SYNGR1-202ENST00000318801 PPM1MQ96MI6 270 aa28.22■■■□□ 2.11
SYNGR1-202ENST00000318801 TRAPPC9Q96Q05 1148 aa28.22■■■□□ 2.11
SYNGR1-202ENST00000318801 LATS2Q9NRM7 1088 aa28.22■■■□□ 2.11
SYNGR1-202ENST00000318801 KCND3Q9UK17 655 aa28.22■■■□□ 2.11
SYNGR1-202ENST00000318801 PLAGL1Q9UM63 463 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms