RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 APOLD1Q96LR9 279 aa13.92□□□□□ -0.18
PABPC1-201ENST00000318607 SLC7A5P2Q9GIP4 190 aa13.92□□□□□ -0.18
PABPC1-201ENST00000318607 KLHL3Q9UH77 587 aa13.92□□□□□ -0.18
PABPC1-201ENST00000318607 ZNF490Q9ULM2 529 aaPredicted RBP13.92□□□□□ -0.18
PABPC1-201ENST00000318607 TPRKBQ9Y3C4 175 aa13.92□□□□□ -0.18
PABPC1-201ENST00000318607 LOC110117498-PIK3R3F6TDL0 507 aa13.92□□□□□ -0.18
PABPC1-201ENST00000318607 UPK1AO00322 258 aa13.92□□□□□ -0.18
PABPC1-201ENST00000318607 CREG1O75629 220 aa13.92□□□□□ -0.18
PABPC1-201ENST00000318607 GKP32189 559 aa13.92□□□□□ -0.18
PABPC1-201ENST00000318607 PBX3P40426 434 aa13.92□□□□□ -0.18
PABPC1-201ENST00000318607 CLK3P49761 638 aaKnown RBP13.92□□□□□ -0.18
PABPC1-201ENST00000318607 CARD16Q5EG05 197 aa13.92□□□□□ -0.18
PABPC1-201ENST00000318607 PRSS36Q5K4E3 855 aa13.92□□□□□ -0.18
PABPC1-201ENST00000318607 TPRG1LQ5T0D9 272 aa13.92□□□□□ -0.18
PABPC1-201ENST00000318607 ARMC4Q5T2S8 1044 aa13.92□□□□□ -0.18
PABPC1-201ENST00000318607 KANK2Q63ZY3 851 aa13.92□□□□□ -0.18
PABPC1-201ENST00000318607 PGBD5Q8N414 524 aa13.92□□□□□ -0.18
PABPC1-201ENST00000318607 OR10T2Q8NGX3 314 aa13.92□□□□□ -0.18
PABPC1-201ENST00000318607 ATOH8Q96SQ7 321 aa13.92□□□□□ -0.18
PABPC1-201ENST00000318607 SH3GL1Q99961 368 aa13.92□□□□□ -0.18
PABPC1-201ENST00000318607 SYTL2Q9HCH5 934 aa13.92□□□□□ -0.18
PABPC1-201ENST00000318607 PAQR5Q9NXK6 330 aaPredicted RBP13.92□□□□□ -0.18
PABPC1-201ENST00000318607 LOXHD1Q8IVV2 1947 aa13.92□□□□□ -0.18
PABPC1-201ENST00000318607 ZNF487B1APH4 448 aa13.92□□□□□ -0.18
PABPC1-201ENST00000318607 SERPINF2P08697 491 aa13.92□□□□□ -0.18
PABPC1-201ENST00000318607 UROSP10746 265 aa13.92□□□□□ -0.18
PABPC1-201ENST00000318607 PCSK1P29120 753 aa13.92□□□□□ -0.18
PABPC1-201ENST00000318607 HK3P52790 923 aa13.92□□□□□ -0.18
PABPC1-201ENST00000318607 RPS24P62847 133 aaKnown RBP13.92□□□□□ -0.18
PABPC1-201ENST00000318607 LAIR1Q6GTX8 287 aa13.92□□□□□ -0.18
PABPC1-201ENST00000318607 TIGD7Q6NT04 549 aaPredicted RBP13.92□□□□□ -0.18
PABPC1-201ENST00000318607 USP43Q70EL4 1123 aa13.92□□□□□ -0.18
PABPC1-201ENST00000318607 PROSER1Q86XN7 944 aa13.92□□□□□ -0.18
PABPC1-201ENST00000318607 PHYKPLQ8IUZ5 450 aa13.92□□□□□ -0.18
PABPC1-201ENST00000318607 COPS4Q9BT78 406 aa13.92□□□□□ -0.18
PABPC1-201ENST00000318607 RHCGQ9UBD6 479 aa13.92□□□□□ -0.18
PABPC1-201ENST00000318607 FAM234BA2RU67 622 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 SH3BP5O60239 455 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 LIPAP38571 399 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 CREMQ03060 361 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 FAM187BQ17R55 369 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 DEPDC1Q5TB30 811 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 FBXL22Q6P050 247 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 VANGL1Q8TAA9 524 aaPredicted RBP13.91□□□□□ -0.18
PABPC1-201ENST00000318607 HDAC2Q92769 488 aaKnown RBP13.91□□□□□ -0.18
PABPC1-201ENST00000318607 GTPBP3Q969Y2 492 aaKnown RBP13.91□□□□□ -0.18
PABPC1-201ENST00000318607 MYEOVQ96EZ4 313 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 GPR63Q9BZJ6 419 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 MMP28Q9H239 520 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 AASDHPPTQ9NRN7 309 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 OSER1Q9NX31 292 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 GPR83Q9NYM4 423 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 USE1Q9NZ43 259 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 H3BM21 787 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 ZNF701M0R085 212 aaPredicted RBP13.91□□□□□ -0.18
PABPC1-201ENST00000318607 KPNA5O15131 536 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 SLC7A4O43246 635 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 GBAP04062 536 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 MMP3P08254 477 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 ALPIP09923 528 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 S100A1P23297 94 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 ADRA1AP35348 466 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 RGRP47804 291 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 EEFSECP57772 596 aaKnown RBP13.91□□□□□ -0.18
PABPC1-201ENST00000318607 ISL1P61371 349 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 EMX2Q04743 252 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 SPANXN2Q5MJ10 180 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 RTL3Q8N8U3 475 aaKnown RBP13.91□□□□□ -0.18
PABPC1-201ENST00000318607 DACT3Q96B18 629 aaPredicted RBP13.91□□□□□ -0.18
PABPC1-201ENST00000318607 SLC9A7Q96T83 725 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 MCMBPQ9BTE3 642 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 PCDHGA10Q9Y5H3 936 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 ULK1O75385 1050 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 KCNK2O95069 426 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 PGRP06401 933 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 STSP08842 583 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 KCNQ1P51787 676 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 CYP4F8P98187 520 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 HIST2H2ACQ16777 129 aaPredicted RBP13.91□□□□□ -0.18
PABPC1-201ENST00000318607 OR4F3Q6IEY1 312 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 TAPT1Q6NXT6 567 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 KLHL17Q6TDP4 642 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 CNTN4Q8IWV2 1026 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 KLHDC9Q8NEP7 349 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 FKBP10Q96AY3 582 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 NEDD4LQ96PU5 975 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 IL4I1Q96RQ9 567 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 CDK5RAP1Q96SZ6 601 aaKnown RBP13.91□□□□□ -0.18
PABPC1-201ENST00000318607 TTPALQ9BTX7 342 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 KAT8Q9H7Z6 458 aaKnown RBP13.91□□□□□ -0.18
PABPC1-201ENST00000318607 ST3GAL5Q9UNP4 418 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 PCDHB9Q9Y5E1 797 aa13.91□□□□□ -0.18
PABPC1-201ENST00000318607 CPNE6O95741 557 aa13.9□□□□□ -0.18
PABPC1-201ENST00000318607 ITPKAP23677 461 aa13.9□□□□□ -0.18
PABPC1-201ENST00000318607 RBM48Q5RL73 367 aaKnown RBP13.9□□□□□ -0.18
PABPC1-201ENST00000318607 KDELC1Q6UW63 502 aa13.9□□□□□ -0.18
PABPC1-201ENST00000318607 PRR23CQ6ZRP0 262 aa13.9□□□□□ -0.18
PABPC1-201ENST00000318607 SZRD1Q7Z422 152 aa13.9□□□□□ -0.18
PABPC1-201ENST00000318607 IQCF2Q8IXL9 164 aa13.9□□□□□ -0.18
PABPC1-201ENST00000318607 ALDH16A1Q8IZ83 802 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms