RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 TTC29Q8NA56 475 aaPredicted RBP9.47□□□□□ -0.89
PTPRA-202ENST00000318266 ATG16L2Q8NAA4 619 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 OR4L1Q8NH43 312 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 PGAP3Q96FM1 320 aaPredicted RBP9.47□□□□□ -0.89
PTPRA-202ENST00000318266 REXO5Q96IC2 774 aaKnown RBP9.47□□□□□ -0.89
PTPRA-202ENST00000318266 SEMA3CQ99985 751 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 CHCHD6Q9BRQ6 235 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 AARSD1Q9BTE6 412 aaKnown RBP9.47□□□□□ -0.89
PTPRA-202ENST00000318266 ZBED2Q9BTP6 218 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 DUSP21Q9H596 190 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 TAS2R13Q9NYV9 303 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 KIF17Q9P2E2 1029 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 CASTOR2A6NHX0 329 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 OR1I1O60431 355 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 DNAJB5O75953 348 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 GUCA1CO95843 209 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 MMP2P08253 660 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 RYKP34925 604 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 DAPP51397 102 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 ZNF280AP59817 542 aaPredicted RBP9.46□□□□□ -0.89
PTPRA-202ENST00000318266 SREBF2Q12772 1141 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 FXNQ16595 210 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 OR8H2Q8N162 312 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 DPP10Q8N608 796 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 RHEBL1Q8TAI7 183 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 EEF1AKMT1Q8WVE0 214 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 DNAJB3Q8WWF6 145 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 MYLPFQ96A32 169 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 TP53INP1Q96A56 240 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 MTFMTQ96DP5 389 aaKnown RBP9.46□□□□□ -0.89
PTPRA-202ENST00000318266 KCNS3Q9BQ31 491 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 PAAF1Q9BRP4 392 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 TMEM246Q9BRR3 403 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 NUAK2Q9H093 628 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 ZNF451Q9Y4E5 1061 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 ACTL7AQ9Y615 435 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 SLC12A8A0AV02 714 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 PABPN1LA6NDY0 278 aaKnown RBP9.46□□□□□ -0.89
PTPRA-202ENST00000318266 HHLA1C9JL84 531 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 IRAK2O43187 625 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 NDUFS3O75489 264 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 C1QCP02747 245 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 AZGP1P25311 298 aaKnown RBP9.46□□□□□ -0.89
PTPRA-202ENST00000318266 GRK5P34947 590 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 RENBPP51606 427 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 DAB2P98082 770 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 CREMQ03060 361 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 ZNF181Q2M3W8 571 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 ZFP69Q49AA0 526 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 GPSM1Q86YR5 675 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 CCDC117Q8IWD4 279 aaPredicted RBP9.46□□□□□ -0.89
PTPRA-202ENST00000318266 ASCC1Q8N9N2 400 aaKnown RBP9.46□□□□□ -0.89
PTPRA-202ENST00000318266 SETD9Q8NE22 299 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 TRPM4Q8TD43 1214 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 FAM120BQ96EK7 910 aaKnown RBP9.46□□□□□ -0.89
PTPRA-202ENST00000318266 PRRG3Q9BZD7 231 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 OR51E2Q9H255 320 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 FARSBQ9NSD9 589 aaKnown RBP9.46□□□□□ -0.89
PTPRA-202ENST00000318266 PAQR5Q9NXK6 330 aaPredicted RBP9.46□□□□□ -0.89
PTPRA-202ENST00000318266 PDP1Q9P0J1 537 aaPredicted RBP9.46□□□□□ -0.89
PTPRA-202ENST00000318266 MED16Q9Y2X0 877 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 IPPQ9Y573 584 aa9.46□□□□□ -0.89
PTPRA-202ENST00000318266 CASP8AP2Q9UKL3 1982 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 ISPDA4D126 451 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 METTL15A6NJ78 407 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 M0QX08 132 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 TNFRSF10AO00220 468 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 SLC16A6O15403 523 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 TLR5O60602 858 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 VIPP01282 170 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 APOA1P02647 267 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 MSH3P20585 1137 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 ACVR2AP27037 513 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 AKT1P31749 480 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 SCNN1GP51170 649 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 CLCNKBP51801 687 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 STC1P52823 247 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 PTPRRQ15256 657 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 SETMARQ53H47 684 aaPredicted RBP9.46□□□□□ -0.9
PTPRA-202ENST00000318266 ALFQ53S48 1182 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 GPR153Q6NV75 609 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 MSRB3Q8IXL7 192 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 TCAIMQ8N3R3 496 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 PGBD5Q8N414 524 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 RTL3Q8N8U3 475 aaKnown RBP9.46□□□□□ -0.9
PTPRA-202ENST00000318266 C3orf58Q8NDZ4 430 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 GTF2H4Q92759 462 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 LINGO1Q96FE5 620 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 SMARCD1Q96GM5 515 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 EXOC2Q96KP1 924 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 NEDD4LQ96PU5 975 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 TNKS2Q9H2K2 1166 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 GORASP2Q9H8Y8 452 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 ARNT2Q9HBZ2 717 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 RNF186Q9NXI6 227 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 EHD3Q9NZN3 535 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 RNF6Q9Y252 685 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 HS3ST4Q9Y661 456 aa9.46□□□□□ -0.9
PTPRA-202ENST00000318266 PTGESO14684 152 aa9.45□□□□□ -0.9
PTPRA-202ENST00000318266 GABRDO14764 452 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms