RNA–Protein interactions for RNA: ENST00000317173.8

MSRA-201, Transcript of methionine sulfoxide reductase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRA, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-201ENST00000317173 IFRD1O00458 451 aaPredicted RBP13.74□□□□□ -0.21
MSRA-201ENST00000317173 FAM107AO95990 144 aa13.74□□□□□ -0.21
MSRA-201ENST00000317173 TNFP01375 233 aa13.74□□□□□ -0.21
MSRA-201ENST00000317173 SLC35G4P0C7Q5 338 aa13.74□□□□□ -0.21
MSRA-201ENST00000317173 IDSP22304 550 aa13.74□□□□□ -0.21
MSRA-201ENST00000317173 ACADLP28330 430 aa13.74□□□□□ -0.21
MSRA-201ENST00000317173 PDHA2P29803 388 aa13.74□□□□□ -0.21
MSRA-201ENST00000317173 SLC1A6P48664 564 aa13.74□□□□□ -0.21
MSRA-201ENST00000317173 SEC24CP53992 1094 aa13.74□□□□□ -0.21
MSRA-201ENST00000317173 ABCE1P61221 599 aaKnown RBP13.74□□□□□ -0.21
MSRA-201ENST00000317173 OCRLQ01968 901 aa13.74□□□□□ -0.21
MSRA-201ENST00000317173 RCN2Q14257 317 aa13.74□□□□□ -0.21
MSRA-201ENST00000317173 PHKG1Q16816 387 aa13.74□□□□□ -0.21
MSRA-201ENST00000317173 PFKFB4Q16877 469 aa13.74□□□□□ -0.21
MSRA-201ENST00000317173 ALG11Q2TAA5 492 aa13.74□□□□□ -0.21
MSRA-201ENST00000317173 CFAP157Q5JU67 520 aa13.74□□□□□ -0.21
MSRA-201ENST00000317173 ZNF678Q5SXM1 525 aa13.74□□□□□ -0.21
MSRA-201ENST00000317173 TPRG1LQ5T0D9 272 aa13.74□□□□□ -0.21
MSRA-201ENST00000317173 FAM83HQ6ZRV2 1179 aaPredicted RBP13.74□□□□□ -0.21
MSRA-201ENST00000317173 ZCCHC23Q6ZST2 131 aa13.74□□□□□ -0.21
MSRA-201ENST00000317173 PARGQ86W56 976 aa13.74□□□□□ -0.21
MSRA-201ENST00000317173 LRRC34Q8IZ02 419 aa13.74□□□□□ -0.21
MSRA-201ENST00000317173 RGL4Q8IZJ4 473 aa13.74□□□□□ -0.21
MSRA-201ENST00000317173 PPP4R1Q8TF05 950 aa13.74□□□□□ -0.21
MSRA-201ENST00000317173 DLG3Q92796 817 aa13.74□□□□□ -0.21
MSRA-201ENST00000317173 SKA1Q96BD8 255 aa13.74□□□□□ -0.21
MSRA-201ENST00000317173 PHF21BQ96EK2 531 aa13.74□□□□□ -0.21
MSRA-201ENST00000317173 RXFP3Q9NSD7 469 aa13.74□□□□□ -0.21
MSRA-201ENST00000317173 KLC4Q9NSK0 619 aa13.74□□□□□ -0.21
MSRA-201ENST00000317173 TMEM74BQ9NUR3 256 aa13.74□□□□□ -0.21
MSRA-201ENST00000317173 UTP6Q9NYH9 597 aaKnown RBP13.74□□□□□ -0.21
MSRA-201ENST00000317173 TSR3Q9UJK0 312 aaKnown RBP13.74□□□□□ -0.21
MSRA-201ENST00000317173 SLC6A14Q9UN76 642 aa13.74□□□□□ -0.21
MSRA-201ENST00000317173 PDE10AQ9Y233 779 aa13.74□□□□□ -0.21
MSRA-201ENST00000317173 DNAJC16Q9Y2G8 782 aa13.74□□□□□ -0.21
MSRA-201ENST00000317173 TP53BP1Q12888 1972 aaPredicted RBP13.74□□□□□ -0.21
MSRA-201ENST00000317173 ATXN2Q99700 1313 aaKnown RBP13.73□□□□□ -0.21
MSRA-201ENST00000317173 DCHS1Q96JQ0 3298 aa13.73□□□□□ -0.21
MSRA-201ENST00000317173 CACNA1AO00555 2505 aa13.73□□□□□ -0.21
MSRA-201ENST00000317173 PATE3B3GLJ2 98 aa13.73□□□□□ -0.21
MSRA-201ENST00000317173 TGDSO95455 350 aa13.73□□□□□ -0.21
MSRA-201ENST00000317173 CFIP05156 583 aa13.73□□□□□ -0.21
MSRA-201ENST00000317173 RPS17P08708 135 aaKnown RBP13.73□□□□□ -0.21
MSRA-201ENST00000317173 ABRQ12979 859 aa13.73□□□□□ -0.21
MSRA-201ENST00000317173 PCBP2Q15366 365 aaKnown RBP eCLIP13.73□□□□□ -0.213e-6■■□□□ 12.5
MSRA-201ENST00000317173 ANKS6Q68DC2 871 aa13.73□□□□□ -0.21
MSRA-201ENST00000317173 WASH2PQ6VEQ5 465 aa13.73□□□□□ -0.21
MSRA-201ENST00000317173 CPLX4Q7Z7G2 160 aa13.73□□□□□ -0.21
MSRA-201ENST00000317173 C1orf216Q8TAB5 229 aa13.73□□□□□ -0.21
MSRA-201ENST00000317173 UBTD2Q8WUN7 234 aa13.73□□□□□ -0.21
MSRA-201ENST00000317173 ATL1Q8WXF7 558 aa13.73□□□□□ -0.21
MSRA-201ENST00000317173 EGFL8Q99944 293 aa13.73□□□□□ -0.21
MSRA-201ENST00000317173 TM9SF3Q9HD45 589 aa13.73□□□□□ -0.21
MSRA-201ENST00000317173 SLCO1B3Q9NPD5 702 aa13.73□□□□□ -0.21
MSRA-201ENST00000317173 TMEM9BQ9NQ34 198 aa13.73□□□□□ -0.21
MSRA-201ENST00000317173 WASH6PQ9NQA3 447 aa13.73□□□□□ -0.21
MSRA-201ENST00000317173 TM7SF3Q9NS93 570 aa13.73□□□□□ -0.21
MSRA-201ENST00000317173 ARL15Q9NXU5 204 aa13.73□□□□□ -0.21
MSRA-201ENST00000317173 PTBP2Q9UKA9 531 aaKnown RBP13.73□□□□□ -0.21
MSRA-201ENST00000317173 ARHGEF33A8MVX0 844 aa13.72□□□□□ -0.21
MSRA-201ENST00000317173 C1orf105O95561 183 aa13.72□□□□□ -0.21
MSRA-201ENST00000317173 DRD4P21917 467 aa13.72□□□□□ -0.21
MSRA-201ENST00000317173 GGT5P36269 586 aa13.72□□□□□ -0.21
MSRA-201ENST00000317173 HK2P52789 917 aa13.72□□□□□ -0.21
MSRA-201ENST00000317173 FZD2Q14332 565 aa13.72□□□□□ -0.21
MSRA-201ENST00000317173 CAPRIN2Q6IMN6 1127 aaKnown RBP13.72□□□□□ -0.21
MSRA-201ENST00000317173 FRMD7Q6ZUT3 714 aa13.72□□□□□ -0.21
MSRA-201ENST00000317173 FAM47EQ6ZV65 393 aa13.72□□□□□ -0.21
MSRA-201ENST00000317173 CRLF3Q8IUI8 442 aa13.72□□□□□ -0.21
MSRA-201ENST00000317173 HOMEZQ8IX15 550 aa13.72□□□□□ -0.21
MSRA-201ENST00000317173 TFGQ92734 400 aaPredicted RBP13.72□□□□□ -0.21
MSRA-201ENST00000317173 TSACCQ96A04 125 aaPredicted RBP13.72□□□□□ -0.21
MSRA-201ENST00000317173 RHBDF1Q96CC6 855 aa13.72□□□□□ -0.21
MSRA-201ENST00000317173 CCDC138Q96M89 665 aa13.72□□□□□ -0.21
MSRA-201ENST00000317173 CCT8L2Q96SF2 557 aa13.72□□□□□ -0.21
MSRA-201ENST00000317173 ZDHHC5Q9C0B5 715 aa13.72□□□□□ -0.21
MSRA-201ENST00000317173 EML4Q9HC35 981 aaKnown RBP13.72□□□□□ -0.21
MSRA-201ENST00000317173 FGFR1OP2Q9NVK5 253 aa13.72□□□□□ -0.21
MSRA-201ENST00000317173 HAO1Q9UJM8 370 aa13.72□□□□□ -0.21
MSRA-201ENST00000317173 PCOLCE2Q9UKZ9 415 aa13.72□□□□□ -0.21
MSRA-201ENST00000317173 KCNK6Q9Y257 313 aa13.72□□□□□ -0.21
MSRA-201ENST00000317173 STK38LQ9Y2H1 464 aa13.72□□□□□ -0.21
MSRA-201ENST00000317173 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.72□□□□□ -0.21
MSRA-201ENST00000317173 GON4LQ3T8J9 2241 aa13.71□□□□□ -0.21
MSRA-201ENST00000317173 NCF1BA6NI72 391 aaPredicted RBP13.71□□□□□ -0.21
MSRA-201ENST00000317173 NCF1CA8MVU1 366 aaPredicted RBP13.71□□□□□ -0.21
MSRA-201ENST00000317173 TLR4O00206 839 aa13.71□□□□□ -0.21
MSRA-201ENST00000317173 VILLO15195 856 aa13.71□□□□□ -0.21
MSRA-201ENST00000317173 SUPT7LO94864 414 aa13.71□□□□□ -0.21
MSRA-201ENST00000317173 HSPA4LO95757 839 aa13.71□□□□□ -0.21
MSRA-201ENST00000317173 GUCA1CO95843 209 aa13.71□□□□□ -0.21
MSRA-201ENST00000317173 SYPP08247 313 aa13.71□□□□□ -0.21
MSRA-201ENST00000317173 NCF1P14598 390 aaPredicted RBP13.71□□□□□ -0.21
MSRA-201ENST00000317173 EEF1DP29692 281 aaKnown RBP13.71□□□□□ -0.21
MSRA-201ENST00000317173 HALP42357 657 aa13.71□□□□□ -0.21
MSRA-201ENST00000317173 PIK3CGP48736 1102 aa13.71□□□□□ -0.21
MSRA-201ENST00000317173 ILF3Q12906 894 aaKnown RBP eCLIP13.71□□□□□ -0.21
MSRA-201ENST00000317173 PRKAA1Q13131 559 aa13.71□□□□□ -0.21
MSRA-201ENST00000317173 EIF2B5Q13144 721 aaKnown RBP13.71□□□□□ -0.21
MSRA-201ENST00000317173 TERF2Q15554 542 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms