RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 C7P10643 843 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 HGFP14210 728 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 EPB42P16452 691 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 EPORP19235 508 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 HTR6P50406 440 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 NUDT2P50583 147 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 ZRSR2Q15696 482 aaKnown RBP11.6□□□□□ -0.55
TRIM40-205ENST00000307859 GSTA3Q16772 222 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 TMEM196Q5HYL7 178 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 TCHHL1Q5QJ38 904 aaPredicted RBP11.6□□□□□ -0.55
TRIM40-205ENST00000307859 KIAA1211LQ6NV74 962 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 XKR5Q6UX68 686 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 C16orf89Q6UX73 402 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.6□□□□□ -0.55
TRIM40-205ENST00000307859 NET1Q7Z628 596 aaPredicted RBP11.6□□□□□ -0.55
TRIM40-205ENST00000307859 MILR1Q7Z6M3 343 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 RALGPS2Q86X27 583 aaPredicted RBP11.6□□□□□ -0.55
TRIM40-205ENST00000307859 KLHDC8AQ8IYD2 350 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 DEFB107AQ8IZN7 70 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 HDDC3Q8N4P3 179 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 METTL6Q8TCB7 284 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 MCOLN3Q8TDD5 553 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 WDR60Q8WVS4 1066 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 ATP6V1E2Q96A05 226 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 FBXL8Q96CD0 374 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 HIC2Q96JB3 615 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 CLPTM1LQ96KA5 538 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 OR2AG1Q9H205 316 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 EFCAB1Q9HAE3 211 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 SDR39U1Q9NRG7 319 aaPredicted RBP11.6□□□□□ -0.55
TRIM40-205ENST00000307859 AIG1Q9NVV5 245 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 NDE1Q9NXR1 346 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 ATXN10Q9UBB4 475 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 SERGEFQ9UGK8 458 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 PRPF19Q9UMS4 504 aaKnown RBP11.6□□□□□ -0.55
TRIM40-205ENST00000307859 TPRP12270 2363 aaKnown RBP11.6□□□□□ -0.55
TRIM40-205ENST00000307859 C17orf113A0A1B0GUU1 675 aa11.59□□□□□ -0.55
TRIM40-205ENST00000307859 A0A1W2PP55 124 aa11.59□□□□□ -0.55
TRIM40-205ENST00000307859 PABPN1LA6NDY0 278 aaKnown RBP11.59□□□□□ -0.55
TRIM40-205ENST00000307859 IGLON5A6NGN9 336 aa11.59□□□□□ -0.55
TRIM40-205ENST00000307859 ENTPD5O75356 428 aa11.59□□□□□ -0.55
TRIM40-205ENST00000307859 CIB2O75838 187 aa11.59□□□□□ -0.55
TRIM40-205ENST00000307859 EGFP01133 1207 aa11.59□□□□□ -0.55
TRIM40-205ENST00000307859 IDO1P14902 403 aa11.59□□□□□ -0.55
TRIM40-205ENST00000307859 CCND1P24385 295 aa11.59□□□□□ -0.55
TRIM40-205ENST00000307859 TEAD1P28347 426 aa11.59□□□□□ -0.55
TRIM40-205ENST00000307859 PREPP48147 710 aa11.59□□□□□ -0.55
TRIM40-205ENST00000307859 CCR3P51677 355 aa11.59□□□□□ -0.55
TRIM40-205ENST00000307859 TBL3Q12788 808 aaKnown RBP11.59□□□□□ -0.55
TRIM40-205ENST00000307859 GRIK2Q13002 908 aa11.59□□□□□ -0.55
TRIM40-205ENST00000307859 GTF2H3Q13889 308 aa11.59□□□□□ -0.55
TRIM40-205ENST00000307859 KPNB1Q14974 876 aaKnown RBP11.59□□□□□ -0.55
TRIM40-205ENST00000307859 TRMT5Q32P41 509 aaKnown RBP11.59□□□□□ -0.55
TRIM40-205ENST00000307859 GGTA1PQ4G0N0 100 aa11.59□□□□□ -0.55
TRIM40-205ENST00000307859 AGKQ53H12 422 aa11.59□□□□□ -0.55
TRIM40-205ENST00000307859 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.59□□□□□ -0.55
TRIM40-205ENST00000307859 PNCKQ6P2M8 343 aa11.59□□□□□ -0.55
TRIM40-205ENST00000307859 Q6ZSR9 355 aa11.59□□□□□ -0.55
TRIM40-205ENST00000307859 CACUL1Q86Y37 369 aa11.59□□□□□ -0.55
TRIM40-205ENST00000307859 ZNF547Q8IVP9 402 aa11.59□□□□□ -0.55
TRIM40-205ENST00000307859 DSELQ8IZU8 1212 aa11.59□□□□□ -0.55
TRIM40-205ENST00000307859 PGAM4Q8N0Y7 254 aa11.59□□□□□ -0.55
TRIM40-205ENST00000307859 MIER2Q8N344 545 aa11.59□□□□□ -0.55
TRIM40-205ENST00000307859 LILRA3Q8N6C8 439 aaPredicted RBP11.59□□□□□ -0.55
TRIM40-205ENST00000307859 ENDOVQ8N8Q3 282 aaKnown RBP11.59□□□□□ -0.55
TRIM40-205ENST00000307859 PLA2G15Q8NCC3 412 aa11.59□□□□□ -0.55
TRIM40-205ENST00000307859 SLC25A23Q9BV35 468 aa11.59□□□□□ -0.55
TRIM40-205ENST00000307859 SLC29A3Q9BZD2 475 aa11.59□□□□□ -0.55
TRIM40-205ENST00000307859 RNPEPL1Q9HAU8 725 aa11.59□□□□□ -0.55
TRIM40-205ENST00000307859 CCDC167Q9P0B6 97 aa11.59□□□□□ -0.55
TRIM40-205ENST00000307859 GPR34Q9UPC5 381 aa11.59□□□□□ -0.55
TRIM40-205ENST00000307859 GPR45Q9Y5Y3 372 aa11.59□□□□□ -0.55
TRIM40-205ENST00000307859 ADAM23O75077 832 aa11.58□□□□□ -0.56
TRIM40-205ENST00000307859 CATP04040 527 aaKnown RBP11.58□□□□□ -0.56
TRIM40-205ENST00000307859 SNRPB2P08579 225 aaKnown RBP11.58□□□□□ -0.56
TRIM40-205ENST00000307859 ZNF8P17098 575 aaPredicted RBP11.58□□□□□ -0.56
TRIM40-205ENST00000307859 PBLDP30039 288 aaPredicted RBP11.58□□□□□ -0.56
TRIM40-205ENST00000307859 HMOX2P30519 316 aa11.58□□□□□ -0.56
TRIM40-205ENST00000307859 ARL1P40616 181 aaPredicted RBP11.58□□□□□ -0.56
TRIM40-205ENST00000307859 ERVK-8P63133 956 aa11.58□□□□□ -0.56
TRIM40-205ENST00000307859 STX5Q13190 355 aa11.58□□□□□ -0.56
TRIM40-205ENST00000307859 STARD3Q14849 445 aa11.58□□□□□ -0.56
TRIM40-205ENST00000307859 KIF19Q2TAC6 998 aa11.58□□□□□ -0.56
TRIM40-205ENST00000307859 WSCD2Q2TBF2 565 aa11.58□□□□□ -0.56
TRIM40-205ENST00000307859 PTCHD3Q3KNS1 767 aa11.58□□□□□ -0.56
TRIM40-205ENST00000307859 C6orf136Q5SQH8 315 aa11.58□□□□□ -0.56
TRIM40-205ENST00000307859 SDE2Q6IQ49 451 aa11.58□□□□□ -0.56
TRIM40-205ENST00000307859 IL27RAQ6UWB1 636 aa11.58□□□□□ -0.56
TRIM40-205ENST00000307859 SCIMPQ6UWF3 145 aa11.58□□□□□ -0.56
TRIM40-205ENST00000307859 HEATR4Q86WZ0 1026 aa11.58□□□□□ -0.56
TRIM40-205ENST00000307859 TRAPPC5Q8IUR0 188 aa11.58□□□□□ -0.56
TRIM40-205ENST00000307859 FUNDC1Q8IVP5 155 aa11.58□□□□□ -0.56
TRIM40-205ENST00000307859 TMEM105Q8N8V8 129 aa11.58□□□□□ -0.56
TRIM40-205ENST00000307859 IL17RCQ8NAC3 791 aa11.58□□□□□ -0.56
TRIM40-205ENST00000307859 FBXO15Q8NCQ5 510 aaPredicted RBP11.58□□□□□ -0.56
TRIM40-205ENST00000307859 OR9I1Q8NGQ6 314 aa11.58□□□□□ -0.56
TRIM40-205ENST00000307859 DNASE1L2Q92874 299 aa11.58□□□□□ -0.56
TRIM40-205ENST00000307859 BRINP2Q9C0B6 783 aa11.58□□□□□ -0.56
TRIM40-205ENST00000307859 MKRN2Q9H000 416 aaKnown RBP11.58□□□□□ -0.56
TRIM40-205ENST00000307859 C8orf33Q9H7E9 229 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms