RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 FAUP35544 74 aaKnown RBP12.44□□□□□ -0.42
USP38-201ENST00000307017 CARD16Q5EG05 197 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 SLC35F1Q5T1Q4 408 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 HGSNATQ68CP4 663 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 FAM217AQ8IXS0 508 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 NECTIN3Q9NQS3 549 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 OAZ3Q9UMX2 235 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 RNF17Q9BXT8 1623 aaKnown RBP12.43□□□□□ -0.42
USP38-201ENST00000307017 CAPN14A8MX76 684 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 TULP2O00295 520 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 MATKP42679 507 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 GNPDA1P46926 289 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 CHIT1Q13231 466 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 IKBKEQ14164 716 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 CLCA4Q14CN2 919 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 RBFAQ8N0V3 343 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 RDH12Q96NR8 316 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 KCNE2Q9Y6J6 123 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 A2ML1A8K2U0 1454 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 HOXA2O43364 376 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 GADD45AP24522 165 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 SCAMP5Q8TAC9 235 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 HEPHQ9BQS7 1158 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 ZNF649Q9BS31 505 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 SLC2A2P11168 524 aaPredicted RBP12.43□□□□□ -0.42
USP38-201ENST00000307017 KANK2Q63ZY3 851 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 THEM6Q8WUY1 208 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 TCF7L1Q9HCS4 588 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 ZNF639Q9UID6 485 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 IQGAP3Q86VI3 1631 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 ZNF99A8MXY4 864 aaPredicted RBP12.43□□□□□ -0.42
USP38-201ENST00000307017 LAMP2P13473 410 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 KIR3DL1P43629 444 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 BTBD16Q32M84 506 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 SSX6Q7RTT6 188 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 MINDY2Q8NBR6 621 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 PXYLP1Q8TE99 480 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 C1QTNF7Q9BXJ2 289 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 DUSP16Q9BY84 665 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 POLR2J2Q9GZM3 115 aaKnown RBP12.43□□□□□ -0.42
USP38-201ENST00000307017 ASB7Q9H672 318 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 SEC61A2Q9H9S3 476 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 GLOD4Q9HC38 313 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 FAM237AA0A1B0GTK4 181 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 AGPSO00116 658 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 CHP2O43745 196 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 TMEM220Q6QAJ8 160 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 ARL9Q6T311 187 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 CEP97Q8IW35 865 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 NXPE1Q8N323 547 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 TMEM130Q8N3G9 435 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 PKP2Q99959 881 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 TIGARQ9NQ88 270 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 MAFKO60675 156 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 PAPSS2O95340 614 aaPredicted RBP12.43□□□□□ -0.42
USP38-201ENST00000307017 CKMT1AP12532 417 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 GDF5P43026 501 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 ABCA11PQ4W5N1 156 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 HSDL2Q6YN16 418 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 LAPTM4BQ86VI4 370 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 OR4C6Q8NH72 309 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 UFD1Q92890 307 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 C12orf43Q96C57 262 aaKnown RBP12.43□□□□□ -0.42
USP38-201ENST00000307017 CRELD1Q96HD1 420 aa12.43□□□□□ -0.42
USP38-201ENST00000307017 ZNF471Q9BX82 626 aaPredicted RBP12.43□□□□□ -0.42
USP38-201ENST00000307017 PRPF19Q9UMS4 504 aaKnown RBP12.43□□□□□ -0.42
USP38-201ENST00000307017 PXDNQ92626 1479 aa12.42□□□□□ -0.42
USP38-201ENST00000307017 TREHO43280 583 aa12.42□□□□□ -0.42
USP38-201ENST00000307017 SRCP12931 536 aa12.42□□□□□ -0.42
USP38-201ENST00000307017 CD97P48960 835 aa12.42□□□□□ -0.42
USP38-201ENST00000307017 PPP3R1P63098 170 aa12.42□□□□□ -0.42
USP38-201ENST00000307017 CDKL4Q5MAI5 379 aa12.42□□□□□ -0.42
USP38-201ENST00000307017 ADAMTSL2Q86TH1 951 aa12.42□□□□□ -0.42
USP38-201ENST00000307017 WDR77Q9BQA1 342 aaPredicted RBP12.42□□□□□ -0.42
USP38-201ENST00000307017 SMURF2Q9HAU4 748 aa12.42□□□□□ -0.42
USP38-201ENST00000307017 TRPV4Q9HBA0 871 aa12.42□□□□□ -0.42
USP38-201ENST00000307017 SLC2A6Q9UGQ3 507 aa12.42□□□□□ -0.42
USP38-201ENST00000307017 GNG8Q9UK08 70 aa12.42□□□□□ -0.42
USP38-201ENST00000307017 RAB26Q9ULW5 256 aa12.42□□□□□ -0.42
USP38-201ENST00000307017 ABCG2Q9UNQ0 655 aa12.42□□□□□ -0.42
USP38-201ENST00000307017 AFDNP55196 1824 aaKnown RBP12.42□□□□□ -0.42
USP38-201ENST00000307017 DEPDC5O75140 1603 aa12.42□□□□□ -0.42
USP38-201ENST00000307017 DAPL1A0PJW8 107 aa12.42□□□□□ -0.42
USP38-201ENST00000307017 RPLP0P05388 317 aaKnown RBP12.42□□□□□ -0.42
USP38-201ENST00000307017 AKR1A1P14550 325 aa12.42□□□□□ -0.42
USP38-201ENST00000307017 ADAM8P78325 824 aa12.42□□□□□ -0.42
USP38-201ENST00000307017 CREMQ03060 361 aa12.42□□□□□ -0.42
USP38-201ENST00000307017 BNIP1Q12981 228 aa12.42□□□□□ -0.42
USP38-201ENST00000307017 SPATA19Q7Z5L4 167 aa12.42□□□□□ -0.42
USP38-201ENST00000307017 GATSQ8NAP1 163 aa12.42□□□□□ -0.42
USP38-201ENST00000307017 GPR151Q8TDV0 419 aa12.42□□□□□ -0.42
USP38-201ENST00000307017 KCNMB3Q9NPA1 279 aa12.42□□□□□ -0.42
USP38-201ENST00000307017 ALOX15BO15296 676 aa12.42□□□□□ -0.42
USP38-201ENST00000307017 SNRPD2P62316 118 aaKnown RBP12.42□□□□□ -0.42
USP38-201ENST00000307017 NPTX1Q15818 432 aa12.42□□□□□ -0.42
USP38-201ENST00000307017 CCDC58Q4VC31 144 aa12.42□□□□□ -0.42
USP38-201ENST00000307017 PHYKPLQ8IUZ5 450 aa12.42□□□□□ -0.42
USP38-201ENST00000307017 DENND6BQ8NEG7 585 aa12.42□□□□□ -0.42
USP38-201ENST00000307017 OR9I1Q8NGQ6 314 aa12.42□□□□□ -0.42
USP38-201ENST00000307017 ZNF700Q9H0M5 742 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms