RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 CSTF2P33240 577 aaKnown RBP eCLIP8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 MAPK10P53779 464 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 CACNA2D1P54289 1103 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 PRKG2Q13237 762 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 OR2L3Q8NG85 312 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 LRMDAQ9H2I8 198 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 WASF3Q9UPY6 502 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 MTF2Q9Y483 593 aaPredicted RBP8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 GPR89AB7ZAQ6 455 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 TMEM150CB9EJG8 249 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 GSC2O15499 205 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 GPR89BP0CG08 455 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 HOXA9P31269 272 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 UNC5AQ6ZN44 842 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 OR4K2Q8NGD2 314 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 KLHL32Q96NJ5 620 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 MCMBPQ9BTE3 642 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 UNKQ9C0B0 810 aaKnown RBP8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 KCNF1Q9H3M0 494 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 SEC14L3Q9UDX4 400 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 MEMO1Q9Y316 297 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 ENO4A6NNW6 628 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 CD2P06729 351 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 SLC7A1P30825 629 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 C4orf46Q504U0 113 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 CCNYL2Q5T2Q4 361 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 CPTPQ5TA50 214 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 IZUMO2Q6UXV1 221 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 RASGRP3Q8IV61 690 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 LRRC34Q8IZ02 419 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 TRPV1Q8NER1 839 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 HLA-CQ95604 372 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 LINGO1Q96FE5 620 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 TRMT2BQ96GJ1 504 aaKnown RBP8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 NOD2Q9HC29 1040 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 IL1RAPQ9NPH3 570 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 TMEM248Q9NWD8 314 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 RHBDL2Q9NX52 303 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 CLEC4AQ9UMR7 237 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 ACACAQ13085 2346 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 TRIM64BA6NI03 449 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 NUAK1O60285 661 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 C5AR1P21730 350 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 BNIP2Q12982 314 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 DPY19L1Q2PZI1 675 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 GXYLT1Q4G148 440 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 IRGCQ6NXR0 463 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 UBE2R2Q712K3 238 aaPredicted RBP8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 SPATA19Q7Z5L4 167 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 TAC4Q86UU9 113 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 HIPK1Q86Z02 1210 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 CAMKVQ8NCB2 501 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 CMASQ8NFW8 434 aaPredicted RBP8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 CEP41Q9BYV8 373 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 ENY2Q9NPA8 101 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 YJEFN3A6XGL0 299 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 BTN3A3O00478 584 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 RLN1P04808 185 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 VIPR1P32241 457 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 CCR8P51685 355 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 HNRNPKP61978 463 aaKnown RBP eCLIP8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 HSF2Q03933 536 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 IL18R1Q13478 541 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 METTL21CQ5VZV1 264 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 POMZP3Q6PJE2 187 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 GALNTL5Q7Z4T8 443 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 CFAP206Q8IYR0 622 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 ZBTB2Q8N680 514 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 C1orf216Q8TAB5 229 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 KLHDC7BQ96G42 594 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 PLEKHG4BQ96PX9 1271 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 AARSD1Q9BTE6 412 aaKnown RBP8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 SRMSQ9H3Y6 488 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 SGK2Q9HBY8 427 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 RUVBL1Q9Y265 456 aaKnown RBP8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 PCCBP05166 539 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 UNGP13051 313 aaPredicted RBP8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 PER3P56645 1201 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 BDH1Q02338 343 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 DCTN2Q13561 401 aaKnown RBP8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 C2orf27AQ580R0 203 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 ALG10Q5BKT4 473 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 SDHAF4Q5VUM1 108 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 KIAA0930Q6ICG6 404 aaPredicted RBP8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 ANKRD33Q7Z3H0 272 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 CROCCP3Q8IVE0 287 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 RASGEF1CQ8N431 466 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 PNLDC1Q8NA58 520 aaKnown RBP8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 SLC35F5Q8WV83 523 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 SNRNP27Q8WVK2 155 aaKnown RBP8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 TTYH3Q9C0H2 523 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 SAR1AQ9NR31 198 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 SPATA6Q9NWH7 488 aaPredicted RBP8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 KIAA0355O15063 1070 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 RGS10O43665 173 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 PSIP1O75475 530 aaKnown RBP8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 ERCC1P07992 297 aaPredicted RBP8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 GRK6P43250 576 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 DHPSP49366 369 aaPredicted RBP8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 RAB39AQ14964 217 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms