RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 CPNE5Q9HCH3 593 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 PLCXD1Q9NUJ7 323 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 RNF181Q9P0P0 153 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 ANAPC2Q9UJX6 822 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 DSPPQ9NZW4 1301 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 LOC100130705A0A1B0GUX0 176 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 ENPP3O14638 875 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 PCDHGA12O60330 932 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 DFNA5O60443 496 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 NDUFS2O75306 463 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 PRKD3O94806 890 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 OLFM2O95897 454 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 SLC10A3P09131 477 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 ENDOUP21128 410 aaKnown RBP5.34□□□□□ -1.56
VPS50-202ENST00000305866 POLR2JP52435 117 aaKnown RBP5.34□□□□□ -1.56
VPS50-202ENST00000305866 PRAMEP78395 509 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 EFNB1P98172 346 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 CHRNEQ04844 493 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 LCP2Q13094 533 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 IL18R1Q13478 541 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 ATP1A4Q13733 1029 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 ZNF846Q147U1 533 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 PON2Q15165 354 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 NEDD8Q15843 81 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 ZNF79Q15937 498 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 NFE2Q16621 373 aaPredicted RBP5.34□□□□□ -1.56
VPS50-202ENST00000305866 C18orf21Q32NC0 220 aaPredicted RBP5.34□□□□□ -1.56
VPS50-202ENST00000305866 RFTN2Q52LD8 501 aaPredicted RBP5.34□□□□□ -1.56
VPS50-202ENST00000305866 TOR1AIP1Q5JTV8 583 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 CST9Q5W186 159 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 SEZ6L2Q6UXD5 910 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 MSANTD1Q6ZTZ1 278 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 CCDC149Q6ZUS6 474 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 ZBTB46Q86UZ6 589 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 THEM5Q8N1Q8 247 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 DDHD1Q8NEL9 900 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 UBE2FQ969M7 185 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 SMIM14Q96QK8 99 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 MCCC1Q96RQ3 725 aaPredicted RBP5.34□□□□□ -1.56
VPS50-202ENST00000305866 LYSMD1Q96S90 227 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 GAD1Q99259 594 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 FUZQ9BT04 418 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 BARHL1Q9BZE3 327 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 DSN1Q9H410 356 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 SEPT10Q9P0V9 454 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 ITGB1BP2Q9UKP3 347 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 PPT2Q9UMR5 302 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 EIF3LQ9Y262 564 aaKnown RBP5.34□□□□□ -1.56
VPS50-202ENST00000305866 BTRCQ9Y297 605 aa5.34□□□□□ -1.56
VPS50-202ENST00000305866 SPTBN5Q9NRC6 3674 aaKnown RBP5.33□□□□□ -1.56
VPS50-202ENST00000305866 NOTCH4Q99466 2003 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 ERVH48-1M5A8F1 160 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 CDC7O00311 574 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 SEPT4O43236 478 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 MT-CO1P00395 513 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 PSMA4P25789 261 aaKnown RBP5.33□□□□□ -1.56
VPS50-202ENST00000305866 PPP5CP53041 499 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 NCS1P62166 190 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 FZD5Q13467 585 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 LAPTM5Q13571 262 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 PWP1Q13610 501 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 CLCA4Q14CN2 919 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 SMN1Q16637 294 aaKnown RBP5.33□□□□□ -1.56
VPS50-202ENST00000305866 CYP51A1Q16850 503 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 ALFQ53S48 1182 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 NXNL2Q5VZ03 156 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 ZNF605Q86T29 641 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 RAVER1Q8IY67 606 aaKnown RBP5.33□□□□□ -1.56
VPS50-202ENST00000305866 ENTHD1Q8IYW4 607 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 ABI1Q8IZP0 508 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 NETO1Q8TDF5 533 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 KCNJ9Q92806 393 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 HMCESQ96FZ2 354 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 OR2A14Q96R47 310 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 PCDH12Q9NPG4 1184 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 POLE4Q9NR33 117 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 RBM22Q9NW64 420 aaKnown RBP eCLIP5.33□□□□□ -1.56
VPS50-202ENST00000305866 SRRDQ9UH36 339 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 NDOR1Q9UHB4 597 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 PADI3Q9ULW8 664 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 ABCG2Q9UNQ0 655 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 PDE10AQ9Y233 779 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 VPS9D1Q9Y2B5 631 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 PCDHGA6Q9Y5G7 932 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 DGKBQ9Y6T7 804 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 HSPE1-MOB4S4R3N1 261 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 TP53BP1Q12888 1972 aaPredicted RBP5.33□□□□□ -1.56
VPS50-202ENST00000305866 NUP214P35658 2090 aaPredicted RBP5.33□□□□□ -1.56
VPS50-202ENST00000305866 ZNF99A8MXY4 864 aaPredicted RBP5.33□□□□□ -1.56
VPS50-202ENST00000305866 AP3D1O14617 1153 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 GIPC1O14908 333 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 PFDN6O15212 129 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 GLUD1P00367 558 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 HGFP14210 728 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 LBPP18428 481 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 TCEA1P23193 301 aaKnown RBP5.33□□□□□ -1.56
VPS50-202ENST00000305866 KRT20P35900 424 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 RGRP47804 291 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 MAPK10P53779 464 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 MTAPQ13126 283 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms