RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 TLR1Q15399 786 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 EGFLAMQ63HQ2 1017 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 ADNP2Q6IQ32 1131 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 DOK6Q6PKX4 331 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 CRTC3Q6UUV7 619 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 SUSD1Q6UWL2 747 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 PDSS2Q86YH6 399 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 TRAPPC5Q8IUR0 188 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 LIX1Q8N485 282 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 DDHD1Q8NEL9 900 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 CANT1Q8WVQ1 401 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 ASZ1Q8WWH4 475 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 SELENOMQ8WWX9 145 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 OR8D1Q8WZ84 308 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 TRIM54Q9BYV2 358 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 ACPTQ9BZG2 426 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 SFXN1Q9H9B4 322 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 GULP1Q9UBP9 304 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 SUCOQ9UBS9 1254 aaKnown RBP11.11□□□□□ -0.63
SCG2-201ENST00000305409 CNOT6Q9ULM6 557 aaKnown RBP11.11□□□□□ -0.63
SCG2-201ENST00000305409 AURKCQ9UQB9 309 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 LRCH1Q9Y2L9 728 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 TMEM98Q9Y2Y6 226 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 C2orf16Q68DN1 1984 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 EME2A4GXA9 379 aaPredicted RBP11.11□□□□□ -0.63
SCG2-201ENST00000305409 PABPN1LA6NDY0 278 aaKnown RBP11.11□□□□□ -0.63
SCG2-201ENST00000305409 PRR23AA6NEV1 266 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 TIPRLO75663 272 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 LRATO95237 230 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 SOD1P00441 154 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 PRNPP04156 253 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 MTPNP58546 118 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 EMX2Q04743 252 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 NAE1Q13564 534 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 GBX1Q14549 363 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 ADGRG6Q86SQ4 1221 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 DHFR2Q86XF0 187 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 CFAP206Q8IYR0 622 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 C2orf73Q8N5S3 287 aaPredicted RBP11.11□□□□□ -0.63
SCG2-201ENST00000305409 TERB1Q8NA31 727 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 SPDYE1Q8NFV5 336 aaPredicted RBP11.11□□□□□ -0.63
SCG2-201ENST00000305409 MCOLN3Q8TDD5 553 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 WFIKKN2Q8TEU8 576 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 TMEM159Q96B96 161 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 ROPN1LQ96C74 230 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 EPS15L1Q9UBC2 864 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 DKK3Q9UBP4 350 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 RIMS3Q9UJD0 308 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 NUMA1Q14980 2115 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 NUP214P35658 2090 aaPredicted RBP11.1□□□□□ -0.63
SCG2-201ENST00000305409 BBIP1A8MTZ0 92 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 GFYI3L273 518 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 MT-ND1P03886 318 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 EBLN1P0CF75 366 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 ADRB3P13945 408 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 GJA4P35212 333 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 OPRD1P41143 372 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 GPR1P46091 355 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 SEC13P55735 322 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 PRKG2Q13237 762 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 ADGRE1Q14246 886 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 PDCD4Q53EL6 469 aaKnown RBP11.1□□□□□ -0.63
SCG2-201ENST00000305409 PLEKHS1Q5SXH7 462 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 PLA2G15Q8NCC3 412 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 FGF14Q92915 247 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 DTD2Q96FN9 168 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 MYADMQ96S97 322 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 NTMT1Q9BV86 223 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 LRTM1Q9HBL6 345 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 PFDN4Q9NQP4 134 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 MRGBPQ9NV56 204 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 SMOXQ9NWM0 555 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 GID8Q9NWU2 228 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 PCDHGB4Q9UN71 923 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 DLGAP4Q9Y2H0 992 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 DTNAQ9Y4J8 743 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 AP4S1Q9Y587 144 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 PCDHGB5Q9Y5G0 923 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 SNX13Q9Y5W8 968 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 USP34Q70CQ2 3546 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 PRSS51A0A1B0GVH4 220 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 FAM234BA2RU67 622 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 FAM149AA5PLN7 773 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 SOBPA7XYQ1 873 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 ANKRD28O15084 1053 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 RGS14O43566 566 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 RNASEH1O60930 286 aaKnown RBP11.1□□□□□ -0.63
SCG2-201ENST00000305409 C8GP07360 202 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 CYP2A7P20853 494 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 TACR1P25103 407 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 GNPDA1P46926 289 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 DCDC1P59894 354 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 PFN3P60673 137 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 NAA20P61599 178 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 LIPEQ05469 1076 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 CNTN1Q12860 1018 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 CHIT1Q13231 466 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 KCNC3Q14003 757 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 NRF1Q16656 503 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 FAM174BQ3ZCQ3 159 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms