RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 ITGAMP11215 1152 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 SSTR3P32745 418 aaPredicted RBP5.16□□□□□ -1.58
SCN1A-201ENST00000303395 MAGEA12P43365 314 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 SREBF2Q12772 1141 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 GOLGA7BQ2TAP0 167 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 GPR107Q5VW38 600 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 TMEM53Q6P2H8 277 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 FAM199XQ6PEV8 388 aaPredicted RBP5.16□□□□□ -1.58
SCN1A-201ENST00000303395 SCUBE3Q8IX30 993 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 ADGRG2Q8IZP9 1017 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 MEIOBQ8N635 442 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 FNDC5Q8NAU1 212 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 BCL7CQ8WUZ0 217 aaPredicted RBP5.16□□□□□ -1.58
SCN1A-201ENST00000303395 CPA5Q8WXQ8 436 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 SMG7Q92540 1137 aaKnown RBP5.16□□□□□ -1.58
SCN1A-201ENST00000303395 DPF1Q92782 380 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 TMEM169Q96HH4 297 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 NELFAQ9H3P2 528 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 WDCPQ9H6R7 721 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 DPP3Q9NY33 737 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 MLXQ9UH92 298 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 PRR5-ARHGAP8B1AHC4 643 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 PRLP01236 227 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 LCP1P13796 627 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 PRDX5P30044 214 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 ARHGAP8P85298 464 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 CD47Q08722 323 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 KLF1Q13351 362 aaPredicted RBP5.16□□□□□ -1.58
SCN1A-201ENST00000303395 IKBKEQ14164 716 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 ZNF169Q14929 603 aaPredicted RBP5.16□□□□□ -1.58
SCN1A-201ENST00000303395 CARTPTQ16568 116 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 TDRD10Q5VZ19 366 aaKnown RBP5.16□□□□□ -1.58
SCN1A-201ENST00000303395 KIAA1614Q5VZ46 1190 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 QSOX2Q6ZRP7 698 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 TIPARPQ7Z3E1 657 aaKnown RBP5.16□□□□□ -1.58
SCN1A-201ENST00000303395 GPSM1Q86YR5 675 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 KLHL15Q96M94 604 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 TSGA13Q96PP4 275 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 FEM1AQ9BSK4 669 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 MID1IP1Q9NPA3 183 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 ZDHHC4Q9NPG8 344 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 BTRCQ9Y297 605 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 KLK4Q9Y5K2 254 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 SCN11AQ9UI33 1791 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 CABIN1Q9Y6J0 2220 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 HYKKA2RU49 373 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 HHLA1C9JL84 531 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 F5H423 210 aaPredicted RBP5.16□□□□□ -1.58
SCN1A-201ENST00000303395 TOR1BO14657 336 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 SGPL1O95470 568 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 SLC16A2P36021 539 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 WDR4P57081 412 aaKnown RBP5.16□□□□□ -1.58
SCN1A-201ENST00000303395 SELENOVP59797 346 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 RAB5BP61020 215 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 BTKQ06187 659 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 INCA1Q0VD86 236 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 ITGA7Q13683 1181 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 PCSK7Q16549 785 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 UNC5AQ6ZN44 842 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 MILR1Q7Z6M3 343 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 GID4Q8IVV7 300 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 ZSCAN1Q8NBB4 408 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 IL31RAQ8NI17 732 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 SLC7A6OSQ96CW6 309 aaPredicted RBP5.16□□□□□ -1.58
SCN1A-201ENST00000303395 FBXO8Q9NRD0 319 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 UCKL1Q9NWZ5 548 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 ELOVL2Q9NXB9 296 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 SLCO3A1Q9UIG8 710 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 NAALAD2Q9Y3Q0 740 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 PP2D1A8MPX8 630 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 SPATA31C2B4DYI2 1134 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 M0R2N6 131 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 UGT1A9O60656 530 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 AK1P00568 194 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 CST1P01037 141 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 C9P02748 559 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 S100A8P05109 93 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 UGT1A6P19224 532 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 UGT1A4P22310 534 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 UGT1A3P35503 534 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 GRM5P41594 1212 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 ETV4P43268 484 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 TUBP50607 506 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 POLR2JP52435 117 aaKnown RBP5.15□□□□□ -1.58
SCN1A-201ENST00000303395 SSBP1Q04837 148 aaKnown RBP5.15□□□□□ -1.58
SCN1A-201ENST00000303395 NEDD8Q15843 81 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 UGT3A2Q3SY77 523 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 IQCCQ4KMZ1 466 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 SPIN4Q56A73 249 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 CERCAMQ5T4B2 595 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 FAM69AQ5T7M9 428 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 SMARCD3Q6STE5 483 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 KDELC1Q6UW63 502 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 LINGO4Q6UY18 593 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 TEX47Q8TBZ9 253 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 ADAMTS16Q8TE57 1224 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 TMEM209Q96SK2 561 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 PSD2Q9BQI7 771 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 ACAT2Q9BWD1 397 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 MROQ9BYG7 248 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms