RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 PKP4Q99569 1192 aa9.23□□□□□ -0.93
RFX3-201ENST00000302303 RDH14Q9HBH5 336 aa9.23□□□□□ -0.93
RFX3-201ENST00000302303 PARVBQ9HBI1 364 aa9.23□□□□□ -0.93
RFX3-201ENST00000302303 NMRAL1Q9HBL8 299 aa9.23□□□□□ -0.93
RFX3-201ENST00000302303 IMP3Q9NV31 184 aaKnown RBP9.23□□□□□ -0.93
RFX3-201ENST00000302303 SENP1Q9P0U3 644 aa9.23□□□□□ -0.93
RFX3-201ENST00000302303 NCDNQ9UBB6 729 aa9.23□□□□□ -0.93
RFX3-201ENST00000302303 CPNE7Q9UBL6 633 aa9.23□□□□□ -0.93
RFX3-201ENST00000302303 CIDEBQ9UHD4 219 aa9.23□□□□□ -0.93
RFX3-201ENST00000302303 GRID1Q9ULK0 1009 aa9.23□□□□□ -0.93
RFX3-201ENST00000302303 ASF1AQ9Y294 204 aa9.23□□□□□ -0.93
RFX3-201ENST00000302303 OARD1Q9Y530 152 aa9.23□□□□□ -0.93
RFX3-201ENST00000302303 ASB1Q9Y576 335 aa9.23□□□□□ -0.93
RFX3-201ENST00000302303 EP300Q09472 2414 aaPredicted RBP9.23□□□□□ -0.93
RFX3-201ENST00000302303 NEMP2A6NFY4 417 aa9.22□□□□□ -0.93
RFX3-201ENST00000302303 OR5K4A6NMS3 321 aa9.22□□□□□ -0.93
RFX3-201ENST00000302303 MYO1CO00159 1063 aa9.22□□□□□ -0.93
RFX3-201ENST00000302303 OPA1O60313 960 aa9.22□□□□□ -0.93
RFX3-201ENST00000302303 KERAO60938 352 aa9.22□□□□□ -0.93
RFX3-201ENST00000302303 GLRA3O75311 464 aa9.22□□□□□ -0.93
RFX3-201ENST00000302303 C8GP07360 202 aa9.22□□□□□ -0.93
RFX3-201ENST00000302303 SLC18A1P54219 525 aa9.22□□□□□ -0.93
RFX3-201ENST00000302303 WDR4P57081 412 aaKnown RBP9.22□□□□□ -0.93
RFX3-201ENST00000302303 C18orf21Q32NC0 220 aaPredicted RBP9.22□□□□□ -0.93
RFX3-201ENST00000302303 C14orf28Q4W4Y0 310 aa9.22□□□□□ -0.93
RFX3-201ENST00000302303 CES4AQ5XG92 561 aa9.22□□□□□ -0.93
RFX3-201ENST00000302303 ATG14Q6ZNE5 492 aa9.22□□□□□ -0.93
RFX3-201ENST00000302303 ZNF438Q7Z4V0 828 aa9.22□□□□□ -0.93
RFX3-201ENST00000302303 EID2Q8N6I1 236 aa9.22□□□□□ -0.93
RFX3-201ENST00000302303 LINC01555Q8NAE3 123 aa9.22□□□□□ -0.93
RFX3-201ENST00000302303 BAHD1Q8TBE0 780 aaPredicted RBP9.22□□□□□ -0.93
RFX3-201ENST00000302303 JPH3Q8WXH2 748 aaPredicted RBP9.22□□□□□ -0.93
RFX3-201ENST00000302303 ALKBH8Q96BT7 664 aaKnown RBP9.22□□□□□ -0.93
RFX3-201ENST00000302303 APOLD1Q96LR9 279 aa9.22□□□□□ -0.93
RFX3-201ENST00000302303 FERD3LQ96RJ6 166 aa9.22□□□□□ -0.93
RFX3-201ENST00000302303 SMC6Q96SB8 1091 aa9.22□□□□□ -0.93
RFX3-201ENST00000302303 RUFY1Q96T51 708 aa9.22□□□□□ -0.93
RFX3-201ENST00000302303 EDEM2Q9BV94 578 aa9.22□□□□□ -0.93
RFX3-201ENST00000302303 KIR3DX1Q9H7L2 352 aa9.22□□□□□ -0.93
RFX3-201ENST00000302303 SIRPGQ9P1W8 387 aa9.22□□□□□ -0.93
RFX3-201ENST00000302303 CPSF2Q9P2I0 782 aaKnown RBP9.22□□□□□ -0.93
RFX3-201ENST00000302303 XPR1Q9UBH6 696 aa9.22□□□□□ -0.93
RFX3-201ENST00000302303 PTBP2Q9UKA9 531 aaKnown RBP9.22□□□□□ -0.93
RFX3-201ENST00000302303 PLAGL1Q9UM63 463 aa9.22□□□□□ -0.93
RFX3-201ENST00000302303 A0A1W2PPV9 198 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 CCDC189A1A4V9 331 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 LRRC14BA6NHZ5 514 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 C4orf47A7E2U8 309 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 HMGB1P1B2RPK0 211 aaPredicted RBP9.21□□□□□ -0.93
RFX3-201ENST00000302303 UBXN8O00124 270 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 IFRD1O00458 451 aaPredicted RBP9.21□□□□□ -0.93
RFX3-201ENST00000302303 COPEO14579 308 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 TM4SF5O14894 197 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 PRICKLE3O43900 615 aaPredicted RBP9.21□□□□□ -0.93
RFX3-201ENST00000302303 DLX3O60479 287 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 SLC16A8O95907 504 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 IMPA1P29218 277 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 HALP42357 657 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 CCT5P48643 541 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 RPIAP49247 311 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 CDKL1Q00532 357 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 SLC14A1Q13336 389 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 SP140Q13342 867 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 FASTKQ14296 549 aaKnown RBP9.21□□□□□ -0.93
RFX3-201ENST00000302303 GPR18Q14330 331 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 NR1D2Q14995 579 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 TSNAXIP1Q2TAA8 658 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 FBXO48Q5FWF7 155 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 ZCCHC8Q6NZY4 707 aaKnown RBP9.21□□□□□ -0.93
RFX3-201ENST00000302303 ZNF761Q86XN6 746 aaPredicted RBP9.21□□□□□ -0.93
RFX3-201ENST00000302303 DCUN1D3Q8IWE4 304 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 ARL10Q8N8L6 244 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 PDPRQ8NCN5 879 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 OR52E1Q8NGJ3 308 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 OR9A1PQ8NGU1 263 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 OR6Y1Q8NGX8 325 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 FLVCR1-AS1Q8TAF5 88 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 STAG3L4Q8TBR4 150 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 MDM1Q8TC05 714 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 ZNF480Q8WV37 535 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 ZFPM2Q8WW38 1151 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 RHBDF1Q96CC6 855 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 MOCOSQ96EN8 888 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 IL17FQ96PD4 163 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 MRPL57Q9BQC6 102 aaKnown RBP9.21□□□□□ -0.93
RFX3-201ENST00000302303 HGH1Q9BTY7 390 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 MRPL46Q9H2W6 279 aaKnown RBP9.21□□□□□ -0.93
RFX3-201ENST00000302303 MVB12BQ9H7P6 319 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 POT1Q9NUX5 634 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 WDR70Q9NW82 654 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 UTP6Q9NYH9 597 aaKnown RBP9.21□□□□□ -0.93
RFX3-201ENST00000302303 OGFRQ9NZT2 677 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 ICKQ9UPZ9 632 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 RNF215Q9Y6U7 377 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 CFAP54Q96N23 3096 aa9.21□□□□□ -0.93
RFX3-201ENST00000302303 ASCC3Q8N3C0 2202 aaKnown RBP9.21□□□□□ -0.94
RFX3-201ENST00000302303 TMEM120BA0PK00 339 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 EME2A4GXA9 379 aaPredicted RBP9.21□□□□□ -0.94
RFX3-201ENST00000302303 E7ENX8 843 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 B4GAT1O43505 415 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms