RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 POLR2IP36954 125 aaKnown RBP13.78□□□□□ -0.2
SDC2-201ENST00000302190 RFTN1Q14699 578 aaPredicted RBP13.78□□□□□ -0.2
SDC2-201ENST00000302190 TXNDC8Q6A555 127 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 OR4F3Q6IEY1 312 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 PDE12Q6L8Q7 609 aaKnown RBP13.78□□□□□ -0.2
SDC2-201ENST00000302190 RRM2BQ7LG56 351 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 TREX1Q9NSU2 369 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 PADI4Q9UM07 663 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 KRT87PA6NCN2 255 aa13.77□□□□□ -0.2
SDC2-201ENST00000302190 ADAMTS4O75173 837 aa13.77□□□□□ -0.2
SDC2-201ENST00000302190 LRG1P02750 347 aa13.77□□□□□ -0.2
SDC2-201ENST00000302190 GPX3P22352 226 aa13.77□□□□□ -0.2
SDC2-201ENST00000302190 SERPINA4P29622 427 aa13.77□□□□□ -0.2
SDC2-201ENST00000302190 KIR3DL1P43629 444 aa13.77□□□□□ -0.2
SDC2-201ENST00000302190 DGUOKQ16854 277 aa13.77□□□□□ -0.2
SDC2-201ENST00000302190 BLOC1S3Q6QNY0 202 aa13.77□□□□□ -0.2
SDC2-201ENST00000302190 KDELC1Q6UW63 502 aa13.77□□□□□ -0.2
SDC2-201ENST00000302190 GOLGA7Q7Z5G4 137 aa13.77□□□□□ -0.2
SDC2-201ENST00000302190 NT5C3BQ969T7 300 aa13.77□□□□□ -0.2
SDC2-201ENST00000302190 IKZF3Q9UKT9 509 aa13.77□□□□□ -0.2
SDC2-201ENST00000302190 MICAL3Q7RTP6 2002 aa13.77□□□□□ -0.2
SDC2-201ENST00000302190 MBLAC1A4D2B0 266 aaPredicted RBP13.77□□□□□ -0.21
SDC2-201ENST00000302190 PGLSO95336 258 aa13.77□□□□□ -0.21
SDC2-201ENST00000302190 OR56A5P0C7T3 313 aa13.77□□□□□ -0.21
SDC2-201ENST00000302190 PRKAG1P54619 331 aa13.77□□□□□ -0.21
SDC2-201ENST00000302190 TRAF3Q13114 568 aa13.77□□□□□ -0.21
SDC2-201ENST00000302190 MED22Q15528 200 aa13.77□□□□□ -0.21
SDC2-201ENST00000302190 TRAPPC5Q8IUR0 188 aa13.77□□□□□ -0.21
SDC2-201ENST00000302190 CLIP4Q8N3C7 705 aa13.77□□□□□ -0.21
SDC2-201ENST00000302190 PLEKHA8Q96JA3 519 aa13.77□□□□□ -0.21
SDC2-201ENST00000302190 MAGEH1Q9H213 219 aa13.77□□□□□ -0.21
SDC2-201ENST00000302190 HMX1Q9NP08 348 aaPredicted RBP13.77□□□□□ -0.21
SDC2-201ENST00000302190 MIEF1Q9NQG6 463 aa13.77□□□□□ -0.21
SDC2-201ENST00000302190 TRPC4Q9UBN4 977 aa13.77□□□□□ -0.21
SDC2-201ENST00000302190 TET1Q8NFU7 2136 aa13.77□□□□□ -0.21
SDC2-201ENST00000302190 IGSF6O95976 241 aa13.77□□□□□ -0.21
SDC2-201ENST00000302190 URODP06132 367 aa13.77□□□□□ -0.21
SDC2-201ENST00000302190 PGRP06401 933 aa13.77□□□□□ -0.21
SDC2-201ENST00000302190 OGNP20774 298 aaKnown RBP13.77□□□□□ -0.21
SDC2-201ENST00000302190 RFX3P48380 749 aa13.77□□□□□ -0.21
SDC2-201ENST00000302190 ACADVLP49748 655 aa13.77□□□□□ -0.21
SDC2-201ENST00000302190 ACLYP53396 1101 aa13.77□□□□□ -0.21
SDC2-201ENST00000302190 CSTF3Q12996 717 aaKnown RBP13.77□□□□□ -0.21
SDC2-201ENST00000302190 NAE1Q13564 534 aa13.77□□□□□ -0.21
SDC2-201ENST00000302190 LETMD1Q6P1Q0 360 aa13.77□□□□□ -0.21
SDC2-201ENST00000302190 Q6ZNX1 250 aa13.77□□□□□ -0.21
SDC2-201ENST00000302190 UMODL1-AS1Q8N2C9 162 aa13.77□□□□□ -0.21
SDC2-201ENST00000302190 FUBP1Q96AE4 644 aaKnown RBP13.77□□□□□ -0.21
SDC2-201ENST00000302190 HHIPL1Q96JK4 782 aa13.77□□□□□ -0.21
SDC2-201ENST00000302190 UROC1Q96N76 676 aa13.77□□□□□ -0.21
SDC2-201ENST00000302190 GPR78Q96P69 363 aa13.77□□□□□ -0.21
SDC2-201ENST00000302190 SLC30A3Q99726 388 aa13.77□□□□□ -0.21
SDC2-201ENST00000302190 OSBPL10Q9BXB5 764 aa13.77□□□□□ -0.21
SDC2-201ENST00000302190 MARCH7Q9H992 704 aa13.77□□□□□ -0.21
SDC2-201ENST00000302190 MAP10Q9P2G4 905 aa13.77□□□□□ -0.21
SDC2-201ENST00000302190 CEPT1Q9Y6K0 416 aa13.77□□□□□ -0.21
SDC2-201ENST00000302190 A0A1B0GVM2 712 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 TFECO14948 347 aaPredicted RBP13.76□□□□□ -0.21
SDC2-201ENST00000302190 CNOT3O75175 753 aaKnown RBP13.76□□□□□ -0.21
SDC2-201ENST00000302190 GABRR2P28476 465 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 RFC2P35250 354 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 ERVPABLB-1P60509 514 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 VBP1P61758 197 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 CHIT1Q13231 466 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 TAF1AQ15573 450 aaPredicted RBP13.76□□□□□ -0.21
SDC2-201ENST00000302190 DEPDC1Q5TB30 811 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 SULT1C3Q6IMI6 304 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 ELMOD1Q8N336 334 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 FBXO22Q8NEZ5 403 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 FRS2Q8WU20 508 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 HIPK3Q9H422 1215 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 RAB23Q9ULC3 237 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 SLC38A8A6NNN8 435 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 ATE1O95260 518 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 AZGP1P25311 298 aaKnown RBP13.76□□□□□ -0.21
SDC2-201ENST00000302190 EPHB3P54753 998 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 SEMA3BQ13214 749 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 CHRNA6Q15825 494 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 UBE2J2Q8N2K1 259 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 TMEM199Q8N511 208 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 ZBTB2Q8N680 514 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 LINC01465Q8N7H1 131 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 SETD9Q8NE22 299 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 MCFD2Q8NI22 146 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 OLAHQ9NV23 265 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 TMEM248Q9NWD8 314 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 SNX6Q9UNH7 406 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 SLC22A14Q9Y267 594 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 ARIH1Q9Y4X5 557 aaPredicted RBP13.76□□□□□ -0.21
SDC2-201ENST00000302190 FUOMA2VDF0 154 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 PRAMEF11O60813 436 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 MITFO75030 526 aaPredicted RBP13.76□□□□□ -0.21
SDC2-201ENST00000302190 ESR1P03372 595 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 EPORP19235 508 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 CSKP41240 450 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 MAP2K4P45985 399 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 SF1Q15637 639 aaKnown RBP13.76□□□□□ -0.21
SDC2-201ENST00000302190 TMCO2Q7Z6W1 182 aaPredicted RBP13.76□□□□□ -0.21
SDC2-201ENST00000302190 DTWD1Q8N5C7 304 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 TERB1Q8NA31 727 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms