RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 AGAP14A8MT82 685 aa20.59■□□□□ 0.89
SMCO4-201ENST00000298966 CACNB4O00305 520 aaPredicted RBP20.59■□□□□ 0.89
SMCO4-201ENST00000298966 GLRA3O75311 464 aa20.59■□□□□ 0.89
SMCO4-201ENST00000298966 PRAMEF1O95521 474 aa20.59■□□□□ 0.89
SMCO4-201ENST00000298966 ALDOAP04075 364 aaKnown RBP20.59■□□□□ 0.89
SMCO4-201ENST00000298966 PYGBP11216 843 aa20.59■□□□□ 0.89
SMCO4-201ENST00000298966 COL6A2P12110 1019 aa20.59■□□□□ 0.89
SMCO4-201ENST00000298966 CD9P21926 228 aa20.59■□□□□ 0.89
SMCO4-201ENST00000298966 KELP23276 732 aa20.59■□□□□ 0.89
SMCO4-201ENST00000298966 GABRB3P28472 473 aa20.59■□□□□ 0.89
SMCO4-201ENST00000298966 CRHR1P34998 444 aa20.59■□□□□ 0.89
SMCO4-201ENST00000298966 B4GALNT1Q00973 533 aa20.59■□□□□ 0.89
SMCO4-201ENST00000298966 RALGDSQ12967 914 aa20.59■□□□□ 0.89
SMCO4-201ENST00000298966 ITIH4Q14624 930 aa20.59■□□□□ 0.89
SMCO4-201ENST00000298966 AMZ1Q400G9 498 aa20.59■□□□□ 0.89
SMCO4-201ENST00000298966 ZRANB3Q5FWF4 1079 aa20.59■□□□□ 0.89
SMCO4-201ENST00000298966 ZNF765Q7L2R6 523 aa20.59■□□□□ 0.89
SMCO4-201ENST00000298966 TSPAN33Q86UF1 283 aa20.59■□□□□ 0.89
SMCO4-201ENST00000298966 SFTPA2Q8IWL1 248 aa20.59■□□□□ 0.89
SMCO4-201ENST00000298966 OR56A4Q8NGH8 313 aa20.59■□□□□ 0.89
SMCO4-201ENST00000298966 OR1E3Q8WZA6 343 aa20.59■□□□□ 0.89
SMCO4-201ENST00000298966 CCDC68Q9H2F9 335 aa20.59■□□□□ 0.89
SMCO4-201ENST00000298966 POPDC3Q9HBV1 291 aa20.59■□□□□ 0.89
SMCO4-201ENST00000298966 BPIFA1Q9NP55 256 aa20.59■□□□□ 0.89
SMCO4-201ENST00000298966 IL26Q9NPH9 171 aa20.59■□□□□ 0.89
SMCO4-201ENST00000298966 SNX15Q9NRS6 342 aa20.59■□□□□ 0.89
SMCO4-201ENST00000298966 MARCH4Q9P2E8 410 aaPredicted RBP20.59■□□□□ 0.89
SMCO4-201ENST00000298966 PCDHGA3Q9Y5H0 932 aa20.59■□□□□ 0.89
SMCO4-201ENST00000298966 UTP20O75691 2785 aaKnown RBP20.58■□□□□ 0.89
SMCO4-201ENST00000298966 ZNF891A8MT65 544 aaPredicted RBP20.58■□□□□ 0.89
SMCO4-201ENST00000298966 CCL22O00626 93 aa20.58■□□□□ 0.89
SMCO4-201ENST00000298966 ZW10O43264 779 aa20.58■□□□□ 0.89
SMCO4-201ENST00000298966 B4GAT1O43505 415 aa20.58■□□□□ 0.89
SMCO4-201ENST00000298966 SPAG7O75391 227 aa20.58■□□□□ 0.89
SMCO4-201ENST00000298966 HAUS5O94927 633 aa20.58■□□□□ 0.89
SMCO4-201ENST00000298966 ELFN1P0C7U0 828 aa20.58■□□□□ 0.89
SMCO4-201ENST00000298966 LIFP15018 202 aa20.58■□□□□ 0.89
SMCO4-201ENST00000298966 STMN1P16949 149 aa20.58■□□□□ 0.89
SMCO4-201ENST00000298966 LSP1P33241 339 aa20.58■□□□□ 0.89
SMCO4-201ENST00000298966 SLC26A3P40879 764 aa20.58■□□□□ 0.89
SMCO4-201ENST00000298966 LIG3P49916 1009 aa20.58■□□□□ 0.89
SMCO4-201ENST00000298966 NFATC2Q13469 925 aa20.58■□□□□ 0.89
SMCO4-201ENST00000298966 USP10Q14694 798 aaKnown RBP20.58■□□□□ 0.89
SMCO4-201ENST00000298966 AGERQ15109 404 aa20.58■□□□□ 0.89
SMCO4-201ENST00000298966 ZKSCAN8Q15776 578 aaPredicted RBP20.58■□□□□ 0.89
SMCO4-201ENST00000298966 SEPT7Q16181 437 aaKnown RBP20.58■□□□□ 0.89
SMCO4-201ENST00000298966 CLPPQ16740 277 aaPredicted RBP20.58■□□□□ 0.89
SMCO4-201ENST00000298966 NLRP8Q86W28 1048 aa20.58■□□□□ 0.89
SMCO4-201ENST00000298966 C9orf43Q8TAL5 461 aaPredicted RBP20.58■□□□□ 0.89
SMCO4-201ENST00000298966 HEXDCQ8WVB3 486 aa20.58■□□□□ 0.89
SMCO4-201ENST00000298966 TSNARE1Q96NA8 513 aa20.58■□□□□ 0.89
SMCO4-201ENST00000298966 ASB8Q9H765 288 aa20.58■□□□□ 0.89
SMCO4-201ENST00000298966 FGF22Q9HCT0 170 aa20.58■□□□□ 0.89
SMCO4-201ENST00000298966 FBXO6Q9NRD1 293 aaPredicted RBP20.58■□□□□ 0.89
SMCO4-201ENST00000298966 SMOXQ9NWM0 555 aa20.58■□□□□ 0.89
SMCO4-201ENST00000298966 TLK1Q9UKI8 766 aa20.58■□□□□ 0.89
SMCO4-201ENST00000298966 GRID1Q9ULK0 1009 aa20.58■□□□□ 0.89
SMCO4-201ENST00000298966 MTO1Q9Y2Z2 717 aaKnown RBP20.58■□□□□ 0.89
SMCO4-201ENST00000298966 A0A087X1B8 175 aa20.57■□□□□ 0.88
SMCO4-201ENST00000298966 TMEM202A6NGA9 273 aa20.57■□□□□ 0.88
SMCO4-201ENST00000298966 OR51F1A6NGY5 319 aa20.57■□□□□ 0.88
SMCO4-201ENST00000298966 F8W8V4 182 aa20.57■□□□□ 0.88
SMCO4-201ENST00000298966 H3BMM5 538 aa20.57■□□□□ 0.88
SMCO4-201ENST00000298966 ESR1P03372 595 aa20.57■□□□□ 0.88
SMCO4-201ENST00000298966 ZNF7P17097 686 aaPredicted RBP20.57■□□□□ 0.88
SMCO4-201ENST00000298966 RPS3P23396 243 aaKnown RBP eCLIP20.57■□□□□ 0.88
SMCO4-201ENST00000298966 UGT1A3P35503 534 aa20.57■□□□□ 0.88
SMCO4-201ENST00000298966 KPNA2P52292 529 aaKnown RBP20.57■□□□□ 0.88
SMCO4-201ENST00000298966 KIAA1024LP59773 190 aa20.57■□□□□ 0.88
SMCO4-201ENST00000298966 RAB10P61026 200 aa20.57■□□□□ 0.88
SMCO4-201ENST00000298966 LIPIQ6XZB0 460 aa20.57■□□□□ 0.88
SMCO4-201ENST00000298966 CACNA2D3Q8IZS8 1091 aa20.57■□□□□ 0.88
SMCO4-201ENST00000298966 ANKRD42Q8N9B4 389 aa20.57■□□□□ 0.88
SMCO4-201ENST00000298966 RCBTB1Q8NDN9 531 aa20.57■□□□□ 0.88
SMCO4-201ENST00000298966 ZNF398Q8TD17 642 aa20.57■□□□□ 0.88
SMCO4-201ENST00000298966 LPGAT1Q92604 370 aa20.57■□□□□ 0.88
SMCO4-201ENST00000298966 PSMG3-AS1Q96PY0 264 aa20.57■□□□□ 0.88
SMCO4-201ENST00000298966 ZSCAN5AQ9BUG6 496 aa20.57■□□□□ 0.88
SMCO4-201ENST00000298966 TMEM168Q9H0V1 697 aa20.57■□□□□ 0.88
SMCO4-201ENST00000298966 FAM83DQ9H4H8 585 aa20.57■□□□□ 0.88
SMCO4-201ENST00000298966 MRPL40Q9NQ50 206 aaKnown RBP20.57■□□□□ 0.88
SMCO4-201ENST00000298966 ZNF71Q9NQZ8 489 aaPredicted RBP20.57■□□□□ 0.88
SMCO4-201ENST00000298966 CRLS1Q9UJA2 301 aa20.57■□□□□ 0.88
SMCO4-201ENST00000298966 BLACEA4D250 179 aa20.56■□□□□ 0.88
SMCO4-201ENST00000298966 RHPN2P1A8MT19 583 aa20.56■□□□□ 0.88
SMCO4-201ENST00000298966 TNFRSF10CO14798 259 aa20.56■□□□□ 0.88
SMCO4-201ENST00000298966 CAPN5O15484 640 aaPredicted RBP20.56■□□□□ 0.88
SMCO4-201ENST00000298966 PYGLP06737 847 aa20.56■□□□□ 0.88
SMCO4-201ENST00000298966 FGF3P11487 239 aaPredicted RBP20.56■□□□□ 0.88
SMCO4-201ENST00000298966 ALDH4A1P30038 563 aa20.56■□□□□ 0.88
SMCO4-201ENST00000298966 OR1D5P58170 312 aa20.56■□□□□ 0.88
SMCO4-201ENST00000298966 PTPRRQ15256 657 aa20.56■□□□□ 0.88
SMCO4-201ENST00000298966 DBN1Q16643 649 aa20.56■□□□□ 0.88
SMCO4-201ENST00000298966 CNSTQ6PJW8 725 aa20.56■□□□□ 0.88
SMCO4-201ENST00000298966 TAS2R42Q7RTR8 314 aa20.56■□□□□ 0.88
SMCO4-201ENST00000298966 TRAM1L1Q8N609 369 aa20.56■□□□□ 0.88
SMCO4-201ENST00000298966 FUBP1Q96AE4 644 aaKnown RBP20.56■□□□□ 0.88
SMCO4-201ENST00000298966 ELMO2Q96JJ3 720 aa20.56■□□□□ 0.88
SMCO4-201ENST00000298966 CYP4F12Q9HCS2 524 aa20.56■□□□□ 0.88
SMCO4-201ENST00000298966 PCMTD2Q9NV79 361 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms