RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 GRIK2Q13002 908 aa17.35■□□□□ 0.37
CCDC78-201ENST00000293889 CLCA4Q14CN2 919 aa17.35■□□□□ 0.37
CCDC78-201ENST00000293889 CCDC153Q494R4 210 aa17.35■□□□□ 0.37
CCDC78-201ENST00000293889 CAPRIN2Q6IMN6 1127 aaKnown RBP17.35■□□□□ 0.37
CCDC78-201ENST00000293889 SBSNQ6UWP8 590 aa17.35■□□□□ 0.37
CCDC78-201ENST00000293889 TAF8Q7Z7C8 310 aa17.35■□□□□ 0.37
CCDC78-201ENST00000293889 RHEBL1Q8TAI7 183 aa17.35■□□□□ 0.37
CCDC78-201ENST00000293889 STAG3L4Q8TBR4 150 aa17.35■□□□□ 0.37
CCDC78-201ENST00000293889 MGARPQ8TDB4 240 aa17.35■□□□□ 0.37
CCDC78-201ENST00000293889 LMX1AQ8TE12 382 aa17.35■□□□□ 0.37
CCDC78-201ENST00000293889 MRPL46Q9H2W6 279 aaKnown RBP17.35■□□□□ 0.37
CCDC78-201ENST00000293889 MLXIPLQ9NP71 852 aa17.35■□□□□ 0.37
CCDC78-201ENST00000293889 ABCF3Q9NUQ8 709 aa17.35■□□□□ 0.37
CCDC78-201ENST00000293889 TAAR2Q9P1P5 351 aa17.35■□□□□ 0.37
CCDC78-201ENST00000293889 SPASTQ9UBP0 616 aa17.35■□□□□ 0.37
CCDC78-201ENST00000293889 SLC6A14Q9UN76 642 aa17.35■□□□□ 0.37
CCDC78-201ENST00000293889 ZFC3H1O60293 1989 aaKnown RBP17.34■□□□□ 0.37
CCDC78-201ENST00000293889 A6NCN8 305 aa17.34■□□□□ 0.37
CCDC78-201ENST00000293889 TARM1B6A8C7 271 aa17.34■□□□□ 0.37
CCDC78-201ENST00000293889 KHNYNO15037 678 aaKnown RBP17.34■□□□□ 0.37
CCDC78-201ENST00000293889 KERAO60938 352 aa17.34■□□□□ 0.37
CCDC78-201ENST00000293889 PSIP1O75475 530 aaKnown RBP17.34■□□□□ 0.37
CCDC78-201ENST00000293889 C8GP07360 202 aa17.34■□□□□ 0.37
CCDC78-201ENST00000293889 ELOCQ15369 112 aa17.34■□□□□ 0.37
CCDC78-201ENST00000293889 PHKG1Q16816 387 aa17.34■□□□□ 0.37
CCDC78-201ENST00000293889 PPP1R3AQ16821 1122 aa17.34■□□□□ 0.37
CCDC78-201ENST00000293889 UAP1L1Q3KQV9 507 aa17.34■□□□□ 0.37
CCDC78-201ENST00000293889 SPDYAQ5MJ70 313 aa17.34■□□□□ 0.37
CCDC78-201ENST00000293889 CGB2Q6NT52 195 aa17.34■□□□□ 0.37
CCDC78-201ENST00000293889 ABRAXAS1Q6UWZ7 409 aa17.34■□□□□ 0.37
CCDC78-201ENST00000293889 WASH2PQ6VEQ5 465 aa17.34■□□□□ 0.37
CCDC78-201ENST00000293889 UBE2R2Q712K3 238 aaPredicted RBP17.34■□□□□ 0.37
CCDC78-201ENST00000293889 ADAMTSL2Q86TH1 951 aa17.34■□□□□ 0.37
CCDC78-201ENST00000293889 FOPNLQ96NB1 174 aa17.34■□□□□ 0.37
CCDC78-201ENST00000293889 ATOH8Q96SQ7 321 aa17.34■□□□□ 0.37
CCDC78-201ENST00000293889 INSM2Q96T92 566 aaPredicted RBP17.34■□□□□ 0.37
CCDC78-201ENST00000293889 ELF4Q99607 663 aaPredicted RBP17.34■□□□□ 0.37
CCDC78-201ENST00000293889 WASH6PQ9NQA3 447 aa17.34■□□□□ 0.37
CCDC78-201ENST00000293889 RXFP3Q9NSD7 469 aa17.34■□□□□ 0.37
CCDC78-201ENST00000293889 SCHIP1Q9P0W5 487 aaPredicted RBP17.34■□□□□ 0.37
CCDC78-201ENST00000293889 PCOLCE2Q9UKZ9 415 aa17.34■□□□□ 0.37
CCDC78-201ENST00000293889 RNF112Q9ULX5 631 aa17.34■□□□□ 0.37
CCDC78-201ENST00000293889 CFAP20Q9Y6A4 193 aaKnown RBP17.34■□□□□ 0.37
CCDC78-201ENST00000293889 LNP1A1A4G5 178 aa17.33■□□□□ 0.37
CCDC78-201ENST00000293889 CCDC189A1A4V9 331 aa17.33■□□□□ 0.37
CCDC78-201ENST00000293889 IFRD1O00458 451 aaPredicted RBP17.33■□□□□ 0.37
CCDC78-201ENST00000293889 SLC16A5O15375 505 aa17.33■□□□□ 0.37
CCDC78-201ENST00000293889 SDC3O75056 442 aa17.33■□□□□ 0.37
CCDC78-201ENST00000293889 PIAS2O75928 621 aa17.33■□□□□ 0.37
CCDC78-201ENST00000293889 UBOX5O94941 541 aa17.33■□□□□ 0.37
CCDC78-201ENST00000293889 RXRGP48443 463 aa17.33■□□□□ 0.37
CCDC78-201ENST00000293889 SHBQ15464 509 aa17.33■□□□□ 0.37
CCDC78-201ENST00000293889 GPSM1Q86YR5 675 aa17.33■□□□□ 0.37
CCDC78-201ENST00000293889 ZNF548Q8NEK5 533 aaPredicted RBP17.33■□□□□ 0.37
CCDC78-201ENST00000293889 TFGQ92734 400 aaPredicted RBP17.33■□□□□ 0.37
CCDC78-201ENST00000293889 SLC12A9Q9BXP2 914 aa17.33■□□□□ 0.37
CCDC78-201ENST00000293889 ARHGEF33A8MVX0 844 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 G3V2L1 256 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 AQP9O43315 295 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 DHRS4L1P0CG22 281 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 MAPK9P45984 424 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 SP140Q13342 867 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 ZNF423Q2M1K9 1284 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 HLA-BQ31612 363 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 UNC5DQ6UXZ4 953 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 PRR23CQ6ZRP0 262 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 PHC3Q8NDX5 983 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 EXT2Q93063 718 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 C12orf66Q96MD2 445 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 NUSAP1Q9BXS6 441 aaKnown RBP17.32■□□□□ 0.36
CCDC78-201ENST00000293889 PARVBQ9HBI1 364 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 UCKL1Q9NWZ5 548 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 UTP6Q9NYH9 597 aaKnown RBP17.32■□□□□ 0.36
CCDC78-201ENST00000293889 PDE10AQ9Y233 779 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 ASF1AQ9Y294 204 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 OARD1Q9Y530 152 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 OR52A4PA6NMU1 304 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 UBXN8O00124 270 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 YY2O15391 372 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 C1orf105O95561 183 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 F3P13726 295 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 MTHFD2P13995 350 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 CPA3P15088 417 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 NQO1P15559 274 aaKnown RBP17.32■□□□□ 0.36
CCDC78-201ENST00000293889 ENGP17813 658 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 HALP42357 657 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 BDKRB1P46663 353 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 ARRB1P49407 418 aaPredicted RBP17.32■□□□□ 0.36
CCDC78-201ENST00000293889 BNIP3Q12983 259 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 TGFBIQ15582 683 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 RPE65Q16518 533 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 CCSMST1Q4G0I0 132 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.32■□□□□ 0.36
CCDC78-201ENST00000293889 HHATQ5VTY9 493 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 DUS1LQ6P1R4 473 aaKnown RBP17.32■□□□□ 0.36
CCDC78-201ENST00000293889 FRA10AC1Q70Z53 315 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 ASRGL1Q7L266 308 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 GKN2Q86XP6 184 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 FAM46DQ8NEK8 389 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 OR5AR1Q8NGP9 310 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms