RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 ACSL1P33121 698 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 CLCNKBP51801 687 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 DACT2Q5SW24 774 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 COMTD1Q86VU5 262 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 LGR4Q9BXB1 951 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 POLE4Q9NR33 117 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 PEX16Q9Y5Y5 336 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 SRRM3A6NNA2 597 aaPredicted RBP15.86■□□□□ 0.13
SSRP1-202ENST00000293880 BHMG1C9JSJ3 638 aaPredicted RBP15.86■□□□□ 0.13
SSRP1-202ENST00000293880 SLC1A2P43004 574 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 PSEN1P49768 467 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 PLA2G16P53816 162 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 COL9A3Q14050 684 aaPredicted RBP15.86■□□□□ 0.13
SSRP1-202ENST00000293880 CPNE8Q86YQ8 564 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 MCEMP1Q8IX19 187 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 OR7D4Q8NG98 312 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 OR4C6Q8NH72 309 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 KXD1Q9BQD3 176 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 UNC93B1Q9H1C4 597 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 RNF121Q9H920 327 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 NKX1-2Q9UD57 310 aaPredicted RBP15.86■□□□□ 0.13
SSRP1-202ENST00000293880 MRTO4Q9UKD2 239 aaKnown RBP15.86■□□□□ 0.13
SSRP1-202ENST00000293880 MAN2B2Q9Y2E5 1009 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 CLDN25C9JDP6 229 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 CD36P16671 472 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 RPL35P42766 123 aaKnown RBP15.86■□□□□ 0.13
SSRP1-202ENST00000293880 WSCD2Q2TBF2 565 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 ABCA11PQ4W5N1 156 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 TOP6BLQ8N6T0 577 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 EBF2Q9HAK2 575 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 TULP3O75386 442 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 PLATP00750 562 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 NCBP2P52298 156 aaKnown RBP eCLIP15.85■□□□□ 0.13
SSRP1-202ENST00000293880 SPATC1Q76KD6 591 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 ZNF598Q86UK7 904 aaKnown RBP15.85■□□□□ 0.13
SSRP1-202ENST00000293880 SVOPLQ8N434 492 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 ANKFN1Q8N957 763 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 BPIFB1Q8TDL5 484 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 RPL10LQ96L21 214 aaKnown RBP15.85■□□□□ 0.13
SSRP1-202ENST00000293880 SLC39A3Q9BRY0 314 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 DAPL1A0PJW8 107 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 IRF6O14896 467 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 ORC5O43913 435 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 OPN1SWP03999 348 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 SLC2A2P11168 524 aaPredicted RBP15.85■□□□□ 0.13
SSRP1-202ENST00000293880 MASP1P48740 699 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 MLLT10P55197 1068 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 CYP2U1Q7Z449 544 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 SLC22A15Q8IZD6 547 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 OR5J2Q8NH18 312 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 COQ8AQ8NI60 647 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 MED11Q9P086 117 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 SPIN1Q9Y657 262 aaPredicted RBP15.85■□□□□ 0.13
SSRP1-202ENST00000293880 DISP2A7MBM2 1401 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 EI24O14681 340 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 GADD45AP24522 165 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 GRM5P41594 1212 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 SCARB2Q14108 478 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 HAGHLQ6PII5 290 aaPredicted RBP15.85■□□□□ 0.13
SSRP1-202ENST00000293880 SLC22A16Q86VW1 577 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 ATAD1Q8NBU5 361 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 ATPIF1Q9UII2 106 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 KANTRA0A1W2PQU2 76 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 TCAF2A6NFQ2 919 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 A8MUA0 341 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 J3QRK9 145 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 MAFKO60675 156 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 TACR2P21452 398 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 ASMTP46597 345 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 PPP1R8Q12972 351 aaKnown RBP15.85■□□□□ 0.13
SSRP1-202ENST00000293880 FAM76BQ5HYJ3 339 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 FIBCD1Q8N539 461 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 FBXL8Q96CD0 374 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 ABCG4Q9H172 646 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 PITPNM1O00562 1244 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 STK16O75716 305 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 EDNRAP25101 427 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 BNIP3Q12983 259 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 SLC13A2Q13183 592 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 FAM46CQ5VWP2 391 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 FAM92BQ6ZTR7 304 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 UNC5BQ8IZJ1 945 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 OR2AJ1Q8NGZ0 328 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 SLC35G5Q96KT7 338 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 ZNF471Q9BX82 626 aaPredicted RBP15.85■□□□□ 0.13
SSRP1-202ENST00000293880 PREBQ9HCU5 417 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 UPB1Q9UBR1 384 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 FBXL3Q9UKT7 428 aa15.85■□□□□ 0.13
SSRP1-202ENST00000293880 AP2A1O95782 977 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 ADH1CP00326 375 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 CPN2P22792 545 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 CRYBB1P53674 252 aaPredicted RBP15.84■□□□□ 0.13
SSRP1-202ENST00000293880 RPA4Q13156 261 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 ZACNQ401N2 412 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 VSIG10LQ86VR7 867 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 FBXL16Q8N461 479 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 CCDC54Q8NEL0 328 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 PNO1Q9NRX1 252 aaKnown RBP15.84■□□□□ 0.13
SSRP1-202ENST00000293880 FAM237AA0A1B0GTK4 181 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 ARL5CA6NH57 179 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms