RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 CPNE3O75131 537 aaKnown RBP17.21■□□□□ 0.35
PCDHA13-201ENST00000289272 EOMESO95936 686 aa17.21■□□□□ 0.35
PCDHA13-201ENST00000289272 F8A1P23610 371 aa17.21■□□□□ 0.35
PCDHA13-201ENST00000289272 ABL2P42684 1182 aa17.21■□□□□ 0.35
PCDHA13-201ENST00000289272 TAS2R41P59536 307 aa17.21■□□□□ 0.35
PCDHA13-201ENST00000289272 TREML1Q86YW5 311 aa17.21■□□□□ 0.35
PCDHA13-201ENST00000289272 SCML4Q8N228 414 aa17.21■□□□□ 0.35
PCDHA13-201ENST00000289272 CCDC107Q8WV48 283 aa17.21■□□□□ 0.35
PCDHA13-201ENST00000289272 TM9SF3Q9HD45 589 aa17.21■□□□□ 0.35
PCDHA13-201ENST00000289272 CALML5Q9NZT1 146 aa17.21■□□□□ 0.35
PCDHA13-201ENST00000289272 PLCL2Q9UPR0 1127 aa17.21■□□□□ 0.35
PCDHA13-201ENST00000289272 Q9Y3F1 56 aa17.21■□□□□ 0.35
PCDHA13-201ENST00000289272 TLX1P31314 330 aaPredicted RBP17.21■□□□□ 0.35
PCDHA13-201ENST00000289272 ARSFP54793 590 aa17.21■□□□□ 0.35
PCDHA13-201ENST00000289272 TPGS1Q6ZTW0 290 aa17.21■□□□□ 0.35
PCDHA13-201ENST00000289272 DENND1CQ8IV53 801 aa17.21■□□□□ 0.35
PCDHA13-201ENST00000289272 FCRL5Q96RD9 977 aa17.21■□□□□ 0.35
PCDHA13-201ENST00000289272 ANKRD60Q9BZ19 345 aa17.21■□□□□ 0.35
PCDHA13-201ENST00000289272 IPPKQ9H8X2 491 aa17.21■□□□□ 0.35
PCDHA13-201ENST00000289272 SNTG1Q9NSN8 517 aa17.21■□□□□ 0.35
PCDHA13-201ENST00000289272 TLL1O43897 1013 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 OR5F1O95221 314 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 CHRNA1P02708 482 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 ESR1P03372 595 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 FGF3P11487 239 aaPredicted RBP17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 RBM34P42696 430 aaKnown RBP17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 NDST2P52849 883 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 PPP5CP53041 499 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 CPSF6Q16630 551 aaKnown RBP eCLIP17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 ZNF431Q8TF32 576 aaPredicted RBP17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 MYO19Q96H55 970 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 MIPEPQ99797 713 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 CA12O43570 354 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 RFPL2O75678 378 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 RHOQP17081 205 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 ACADLP28330 430 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 MNDAP41218 407 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 GPALPP1Q8IXQ4 340 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 CPNE9Q8IYJ1 553 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 PHTF2Q8N3S3 785 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 ELMO1Q92556 727 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 IGFLR1Q9H665 355 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 C14orf105Q9NVL8 296 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 BOLA2-SMG1P6H3BVE0 249 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 AXIN1O15169 862 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 CFHP08603 1231 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 PIRTP0C851 137 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 IL1R2P27930 398 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 HOXD12P35452 270 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 ZNF697Q5TEC3 545 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 SDHAF4Q5VUM1 108 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 CHSY3Q70JA7 882 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 KBTBD6Q86V97 674 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 KLHL5Q96PQ7 755 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 POLR2J2Q9GZM3 115 aaKnown RBP17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 SNX4O95219 450 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 NMBRP28336 390 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 FMO3P31513 532 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 SNAP47Q5SQN1 464 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 DET1Q7L5Y6 550 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 MGME1Q9BQP7 344 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 TMEM45AQ9NWC5 275 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 DTLQ9NZJ0 730 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 MAGED1Q9Y5V3 778 aaPredicted RBP17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 AURKAO14965 403 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 NOBOXO60393 691 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 ENTPD6O75354 484 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 CXCL14O95715 111 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 ZNF182P17025 639 aaPredicted RBP17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 GTF2E2P29084 291 aaKnown RBP17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 ARFIP1P53367 373 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 TAS2R39P59534 338 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 RPS14P62263 151 aaKnown RBP17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 KLF1Q13351 362 aaPredicted RBP17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 CRTC2Q53ET0 693 aaPredicted RBP17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 PLCZ1Q86YW0 608 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 TMEM192Q8IY95 271 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 KLHL6Q8WZ60 621 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 CAPNS2Q96L46 248 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 TRNT1Q96Q11 434 aaKnown RBP17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 ACBD6Q9BR61 282 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 CD93Q9NPY3 652 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 PADI3Q9ULW8 664 aa17.2■□□□□ 0.34
PCDHA13-201ENST00000289272 LAMB4A4D0S4 1761 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 FZD9O00144 591 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 SLC19A2O60779 497 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 RSL1D1O76021 490 aaKnown RBP17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 LILRA4P59901 499 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 STX12Q86Y82 276 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 TNFAIP8L1Q8WVP5 186 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 NR4A3Q92570 626 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 TCF25Q9BQ70 676 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 RABL2AQ9UBK7 228 aaPredicted RBP17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 FBXO10Q9UK96 956 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 RABL2BQ9UNT1 228 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 TEX46H3BTG2 121 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 SLC28A2O43868 658 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 RLN1P04808 185 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 BMP2P12643 396 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 SH3PXD2AQ5TCZ1 1133 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms