RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 ANXA5P08758 320 aa18.42■□□□□ 0.54
PDLIM3-202ENST00000284770 HERVK_113P63132 956 aa18.42■□□□□ 0.54
PDLIM3-202ENST00000284770 CLCA4Q14CN2 919 aa18.42■□□□□ 0.54
PDLIM3-202ENST00000284770 SETDB1Q15047 1291 aa18.42■□□□□ 0.54
PDLIM3-202ENST00000284770 PRRT3Q5FWE3 981 aa18.42■□□□□ 0.54
PDLIM3-202ENST00000284770 SULT1C3Q6IMI6 304 aa18.42■□□□□ 0.54
PDLIM3-202ENST00000284770 SPATA21Q7Z572 469 aa18.42■□□□□ 0.54
PDLIM3-202ENST00000284770 MAGEC3Q8TD91 643 aa18.42■□□□□ 0.54
PDLIM3-202ENST00000284770 PIGKQ92643 395 aa18.42■□□□□ 0.54
PDLIM3-202ENST00000284770 RHBDF1Q96CC6 855 aa18.42■□□□□ 0.54
PDLIM3-202ENST00000284770 L3HYPDHQ96EM0 354 aa18.42■□□□□ 0.54
PDLIM3-202ENST00000284770 C12orf66Q96MD2 445 aa18.42■□□□□ 0.54
PDLIM3-202ENST00000284770 TMEM237Q96Q45 408 aa18.42■□□□□ 0.54
PDLIM3-202ENST00000284770 SORT1Q99523 831 aa18.42■□□□□ 0.54
PDLIM3-202ENST00000284770 LRRC61Q9BV99 259 aa18.42■□□□□ 0.54
PDLIM3-202ENST00000284770 ERVK-6Q9BXR3 956 aa18.42■□□□□ 0.54
PDLIM3-202ENST00000284770 PTBP2Q9UKA9 531 aaKnown RBP18.42■□□□□ 0.54
PDLIM3-202ENST00000284770 LYPLA1O75608 230 aaPredicted RBP18.42■□□□□ 0.54
PDLIM3-202ENST00000284770 TGDSO95455 350 aa18.42■□□□□ 0.54
PDLIM3-202ENST00000284770 RPN2P04844 631 aa18.42■□□□□ 0.54
PDLIM3-202ENST00000284770 HOXD12P35452 270 aa18.42■□□□□ 0.54
PDLIM3-202ENST00000284770 HALP42357 657 aa18.42■□□□□ 0.54
PDLIM3-202ENST00000284770 BDKRB1P46663 353 aa18.42■□□□□ 0.54
PDLIM3-202ENST00000284770 ABCE1P61221 599 aaKnown RBP18.42■□□□□ 0.54
PDLIM3-202ENST00000284770 ZNF678Q5SXM1 525 aa18.42■□□□□ 0.54
PDLIM3-202ENST00000284770 MBOAT1Q6ZNC8 495 aa18.42■□□□□ 0.54
PDLIM3-202ENST00000284770 PHC3Q8NDX5 983 aa18.42■□□□□ 0.54
PDLIM3-202ENST00000284770 OR5K2Q8NHB8 316 aa18.42■□□□□ 0.54
PDLIM3-202ENST00000284770 CCDC138Q96M89 665 aa18.42■□□□□ 0.54
PDLIM3-202ENST00000284770 ERVMER34-1Q9H9K5 563 aa18.42■□□□□ 0.54
PDLIM3-202ENST00000284770 CFAP20Q9Y6A4 193 aaKnown RBP18.42■□□□□ 0.54
PDLIM3-202ENST00000284770 TNRC6BQ9UPQ9 1833 aaKnown RBP18.41■□□□□ 0.54
PDLIM3-202ENST00000284770 A6NCN8 305 aa18.41■□□□□ 0.54
PDLIM3-202ENST00000284770 TMEM114B3SHH9 223 aa18.41■□□□□ 0.54
PDLIM3-202ENST00000284770 DPP6P42658 865 aa18.41■□□□□ 0.54
PDLIM3-202ENST00000284770 CTSKP43235 329 aa18.41■□□□□ 0.54
PDLIM3-202ENST00000284770 HNMTP50135 292 aa18.41■□□□□ 0.54
PDLIM3-202ENST00000284770 HNRNPKP61978 463 aaKnown RBP eCLIP18.41■□□□□ 0.54
PDLIM3-202ENST00000284770 SF3A3Q12874 501 aaKnown RBP eCLIP18.41■□□□□ 0.54
PDLIM3-202ENST00000284770 KIF19Q2TAC6 998 aa18.41■□□□□ 0.54
PDLIM3-202ENST00000284770 CCSMST1Q4G0I0 132 aa18.41■□□□□ 0.54
PDLIM3-202ENST00000284770 TTC23LQ6PF05 361 aa18.41■□□□□ 0.54
PDLIM3-202ENST00000284770 PRR23BQ6ZRT6 265 aa18.41■□□□□ 0.54
PDLIM3-202ENST00000284770 TAF8Q7Z7C8 310 aa18.41■□□□□ 0.54
PDLIM3-202ENST00000284770 DCUN1D3Q8IWE4 304 aa18.41■□□□□ 0.54
PDLIM3-202ENST00000284770 TBC1D21Q8IYX1 336 aa18.41■□□□□ 0.54
PDLIM3-202ENST00000284770 TCAIMQ8N3R3 496 aa18.41■□□□□ 0.54
PDLIM3-202ENST00000284770 CCNYL1Q8N7R7 359 aa18.41■□□□□ 0.54
PDLIM3-202ENST00000284770 OR5AR1Q8NGP9 310 aa18.41■□□□□ 0.54
PDLIM3-202ENST00000284770 MOCOSQ96EN8 888 aa18.41■□□□□ 0.54
PDLIM3-202ENST00000284770 C1QTNF3Q9BXJ4 246 aa18.41■□□□□ 0.54
PDLIM3-202ENST00000284770 SCHIP1Q9P0W5 487 aaPredicted RBP18.41■□□□□ 0.54
PDLIM3-202ENST00000284770 TAAR2Q9P1P5 351 aa18.41■□□□□ 0.54
PDLIM3-202ENST00000284770 TNPO3Q9Y5L0 923 aaKnown RBP18.41■□□□□ 0.54
PDLIM3-202ENST00000284770 SPAG17Q6Q759 2223 aa18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 MYO1CO00159 1063 aa18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 TAPBPO15533 448 aa18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 SIX3O95343 332 aaPredicted RBP18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 EML2O95834 649 aa18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 CELA2BP08218 269 aaPredicted RBP18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 F3P13726 295 aa18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 AGTR2P50052 363 aa18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 C1orf61Q13536 156 aa18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 ELOCQ15369 112 aa18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 RPE65Q16518 533 aa18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 FBXO48Q5FWF7 155 aa18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 CFAP157Q5JU67 520 aa18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 PRAMEF14Q5SWL7 426 aa18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 FOXR1Q6PIV2 292 aa18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 CACNA2D3Q8IZS8 1091 aa18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 RAD51AP1Q96B01 352 aa18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 DRC3Q9H069 523 aa18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 TRIT1Q9H3H1 467 aaKnown RBP18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 IMP3Q9NV31 184 aaKnown RBP18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 KRT87PA6NCN2 255 aa18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 OR52A4PA6NMU1 304 aa18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 EEF1DP29692 281 aaKnown RBP18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 GGT5P36269 586 aa18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 PCBP2Q15366 365 aaKnown RBP eCLIP18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 UNC50Q53HI1 259 aa18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 OR9A1PQ8NGU1 263 aa18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 FBXL8Q96CD0 374 aa18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 CNDP1Q96KN2 507 aa18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 FERD3LQ96RJ6 166 aa18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 PKP4Q99569 1192 aa18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 ACSS2Q9NR19 701 aa18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 WWOXQ9NZC7 414 aa18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 KLHL14Q9P2G3 628 aa18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 SPASTQ9UBP0 616 aa18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 SNX11Q9Y5W9 270 aa18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 HEBP2Q9Y5Z4 205 aa18.4■□□□□ 0.54
PDLIM3-202ENST00000284770 LRRC14BA6NHZ5 514 aa18.39■□□□□ 0.53
PDLIM3-202ENST00000284770 NPHS1O60500 1241 aa18.39■□□□□ 0.53
PDLIM3-202ENST00000284770 SUPT7LO94864 414 aa18.39■□□□□ 0.53
PDLIM3-202ENST00000284770 MTHFD1P11586 935 aaKnown RBP18.39■□□□□ 0.53
PDLIM3-202ENST00000284770 SERPINB5P36952 375 aa18.39■□□□□ 0.53
PDLIM3-202ENST00000284770 NAA20P61599 178 aa18.39■□□□□ 0.53
PDLIM3-202ENST00000284770 BNC1Q01954 994 aa18.39■□□□□ 0.53
PDLIM3-202ENST00000284770 RCN2Q14257 317 aa18.39■□□□□ 0.53
PDLIM3-202ENST00000284770 C18orf21Q32NC0 220 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms