RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 OGDHQ02218 1023 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 NPTX1Q15818 432 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 LBX2Q6XYB7 198 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 OAFQ86UD1 273 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 HDAC2Q92769 488 aaKnown RBP16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 MNTQ99583 582 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 TMEM246Q9BRR3 403 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 FTHL17Q9BXU8 183 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 RRAGCQ9HB90 399 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 ADAMTS6Q9UKP5 1117 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 NEURL4Q96JN8 1562 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 A0A1W2PQ67 120 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 A8MT66 165 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 M0R2N6 131 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 HTRA2O43464 458 aaPredicted RBP16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 ESR1P03372 595 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 FAUP35544 74 aaKnown RBP16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 PAQR3Q6TCH7 311 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 FAM92BQ6ZTR7 304 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 TWNKQ96RR1 684 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 TVP23BQ9NYZ1 205 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 COMMD3Q9UBI1 195 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 PMM2O15305 246 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 COQ9O75208 318 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 GADD45GO95257 159 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 IFI44LQ53G44 452 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 NCBP2-AS2Q69YL0 99 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 XKRXQ6PP77 449 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 RTL4Q6ZR62 310 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 IPCEF1Q8WWN9 437 aaPredicted RBP16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 ZNF354BQ96LW1 612 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 PHOX2BQ99453 314 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 TRPS1Q9UHF7 1281 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 TEX264Q9Y6I9 313 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 TCAF2A6NFQ2 919 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 MPZL2O60487 215 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 ABCB7O75027 752 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 HMGCS1Q01581 520 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 TIGD6Q17RP2 521 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 MED27Q6P2C8 311 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 MTERF1Q99551 399 aaKnown RBP16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 TUBA1CQ9BQE3 449 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 TTLL2Q9BWV7 592 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 RGS17Q9UGC6 210 aaPredicted RBP16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 SF1Q15637 639 aaKnown RBP16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 ZNF404Q494X3 552 aa16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 GLB1L3Q8NCI6 653 aaPredicted RBP16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 PRICKLE1Q96MT3 831 aaPredicted RBP16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 CYP2S1Q96SQ9 504 aa16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 HERC2P3Q9BVR0 1158 aa16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 GPN1Q9HCN4 374 aaPredicted RBP16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 CTPS2Q9NRF8 586 aa16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 KERAO60938 352 aa16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 ITPKBP27987 946 aa16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 PTGER3P43115 390 aa16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 ALDH3A2P51648 485 aa16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 NDST2P52849 883 aa16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 OLIG2Q13516 323 aa16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 TMBIM1Q969X1 311 aa16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 TRNT1Q96Q11 434 aaKnown RBP16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 OSER1Q9NX31 292 aa16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 PADI3Q9ULW8 664 aa16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 H3BNH8 94 aa16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 RSL1D1O76021 490 aaKnown RBP16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 CDK4P11802 303 aa16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 KIAA1324Q6UXG2 1013 aaKnown RBP16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 ERMP1Q7Z2K6 904 aa16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 HID1Q8IV36 788 aa16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 ZNF248Q8NDW4 579 aa16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 PJA1Q8NG27 643 aa16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 SCAMP5Q8TAC9 235 aa16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 ACBD6Q9BR61 282 aa16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 BRINP2Q9C0B6 783 aa16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 RNF208Q9H0X6 261 aa16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 DSN1Q9H410 356 aa16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 FAM83DQ9H4H8 585 aa16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 MCIDASD6RGH6 385 aa16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 GLDCP23378 1020 aa16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 GGT5P36269 586 aa16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 DGKQP52824 942 aa16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 NAPRTQ6XQN6 538 aa16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 POLR2J2Q9GZM3 115 aaKnown RBP16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 MAGEH1Q9H213 219 aa16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 SLC27A6Q9Y2P4 619 aa16.17■□□□□ 0.18
SH3RF1-201ENST00000284637 TTC24A2A3L6 582 aaPredicted RBP16.16■□□□□ 0.18
SH3RF1-201ENST00000284637 BTBD19C9JJ37 291 aa16.16■□□□□ 0.18
SH3RF1-201ENST00000284637 TYROBPO43914 113 aa16.16■□□□□ 0.18
SH3RF1-201ENST00000284637 OGNP20774 298 aaKnown RBP16.16■□□□□ 0.18
SH3RF1-201ENST00000284637 SEMG2Q02383 582 aa16.16■□□□□ 0.18
SH3RF1-201ENST00000284637 IL10RBQ08334 325 aa16.16■□□□□ 0.18
SH3RF1-201ENST00000284637 RAB39AQ14964 217 aa16.16■□□□□ 0.18
SH3RF1-201ENST00000284637 BEND5Q7L4P6 421 aa16.16■□□□□ 0.18
SH3RF1-201ENST00000284637 CFAP206Q8IYR0 622 aa16.16■□□□□ 0.18
SH3RF1-201ENST00000284637 ZMIZ2Q8NF64 920 aa16.16■□□□□ 0.18
SH3RF1-201ENST00000284637 SNX33Q8WV41 574 aa16.16■□□□□ 0.18
SH3RF1-201ENST00000284637 DNASE1L2Q92874 299 aa16.16■□□□□ 0.18
SH3RF1-201ENST00000284637 HSPB11Q9Y547 144 aa16.16■□□□□ 0.18
SH3RF1-201ENST00000284637 GANABQ14697 944 aaKnown RBP16.16■□□□□ 0.18
SH3RF1-201ENST00000284637 CTC1Q2NKJ3 1217 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms