RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 CCNFP41002 786 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 ETV5P41161 510 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 MLLT3P42568 568 aaPredicted RBP6.34□□□□□ -1.39
CD44-204ENST00000279452 CLCN7P51798 805 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 CDKN2DP55273 166 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 PCBP4P57723 403 aaKnown RBP6.34□□□□□ -1.39
CD44-204ENST00000279452 KCNAB1Q14722 419 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 RTP5Q14D33 572 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 EFTUD2Q15029 972 aaKnown RBP eCLIP6.34□□□□□ -1.39
CD44-204ENST00000279452 TBC1D25Q3MII6 688 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 TMTC4Q5T4D3 741 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 HECTD2Q5U5R9 776 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 FBXO38Q6PIJ6 1188 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 LRRC69Q6ZNQ3 347 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 UBE2R2Q712K3 238 aaPredicted RBP6.34□□□□□ -1.39
CD44-204ENST00000279452 PIWIL4Q7Z3Z4 852 aaKnown RBP6.34□□□□□ -1.39
CD44-204ENST00000279452 TRIM73Q86UV7 250 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 SLC26A11Q86WA9 606 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 RASGRP3Q8IV61 690 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 SPNS2Q8IVW8 549 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 GSPT2Q8IYD1 628 aaKnown RBP6.34□□□□□ -1.39
CD44-204ENST00000279452 LMNTD1Q8N9Z9 388 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 LRRN4CLQ8ND94 238 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 GIMAP7Q8NHV1 300 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 UHMK1Q8TAS1 419 aaKnown RBP6.34□□□□□ -1.39
CD44-204ENST00000279452 CD200R1Q8TD46 325 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 FBF1Q8TES7 1133 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 KCNE4Q8WWG9 221 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 UBXN4Q92575 508 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 INPP5DQ92835 1189 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 USP7Q93009 1102 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 RAD51AP1Q96B01 352 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 ALKBH8Q96BT7 664 aaKnown RBP6.34□□□□□ -1.39
CD44-204ENST00000279452 LINGO1Q96FE5 620 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 VPS39Q96JC1 886 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 ZNF578Q96N58 590 aaPredicted RBP6.34□□□□□ -1.39
CD44-204ENST00000279452 OR6C1Q96RD1 312 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 SLC30A3Q99726 388 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 MAP3K3Q99759 626 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 RAB11FIP5Q9BXF6 653 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 FAM129AQ9BZQ8 928 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 PHACTR1Q9C0D0 580 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 TFB2MQ9H5Q4 396 aaKnown RBP6.34□□□□□ -1.39
CD44-204ENST00000279452 FANCEQ9HB96 536 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 PLAC1Q9HBJ0 212 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 ZDHHC18Q9NUE0 388 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 ACTR10Q9NZ32 417 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.34□□□□□ -1.39
CD44-204ENST00000279452 LNPEPQ9UIQ6 1025 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 ZMIZ1Q9ULJ6 1067 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 CORO1CQ9ULV4 474 aaPredicted RBP6.34□□□□□ -1.39
CD44-204ENST00000279452 NFU1Q9UMS0 254 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 CDYLQ9Y232 598 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 RAXQ9Y2V3 346 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 PCDHB11Q9Y5F2 797 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 PCDHGA8Q9Y5G5 932 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 PSAT1Q9Y617 370 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 CEP250Q9BV73 2442 aa6.34□□□□□ -1.4
CD44-204ENST00000279452 FRYLO94915 3013 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 CFAP54Q96N23 3096 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 IGHV5-51A0A0C4DH38 117 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 A0A1W2PNU3 283 aaPredicted RBP6.33□□□□□ -1.4
CD44-204ENST00000279452 SLC9B1P1A6NJY1 282 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 ARHGEF33A8MVX0 844 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 CXorf49A8MYA2 514 aaPredicted RBP6.33□□□□□ -1.4
CD44-204ENST00000279452 RASGRF2O14827 1237 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 POLR1CO15160 346 aaPredicted RBP6.33□□□□□ -1.4
CD44-204ENST00000279452 RRP8O43159 456 aaKnown RBP6.33□□□□□ -1.4
CD44-204ENST00000279452 ZBTB14O43829 449 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 ZNF500O60304 480 aaPredicted RBP6.33□□□□□ -1.4
CD44-204ENST00000279452 C1orf105O95561 183 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 C9P02748 559 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 CHRM5P08912 532 aaPredicted RBP6.33□□□□□ -1.4
CD44-204ENST00000279452 ANKRD34CP0C6C1 535 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 EBLN1P0CF75 366 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 MPC1LP0DKB6 136 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 CBSLP0DN79 551 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 FGF3P11487 239 aaPredicted RBP6.33□□□□□ -1.4
CD44-204ENST00000279452 PVRP15151 417 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 UGT2B7P16662 529 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 CYP2A7P20853 494 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 CD9P21926 228 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 FDXRP22570 491 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 GABRB3P28472 473 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 ATP5DP30049 168 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 PKLRP30613 574 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 SLC5A2P31639 672 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 CBSP35520 551 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 DEKP35659 375 aaKnown RBP6.33□□□□□ -1.4
CD44-204ENST00000279452 GP5P40197 560 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 SKIV2L2P42285 1042 aaKnown RBP6.33□□□□□ -1.4
CD44-204ENST00000279452 RAB28P51157 221 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 KPNA2P52292 529 aaKnown RBP6.33□□□□□ -1.4
CD44-204ENST00000279452 PGGT1BP53609 377 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 RAB15P59190 212 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 GPX6P59796 221 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 IL2P60568 153 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 SH3BP2P78314 561 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 SQSTM1Q13501 440 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 TUBB3Q13509 450 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms