RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 SRPRAP08240 638 aaKnown RBP17.51■□□□□ 0.39
CAPN1-201ENST00000279247 CYP2A7P20853 494 aa17.51■□□□□ 0.39
CAPN1-201ENST00000279247 NFKBIAP25963 317 aa17.51■□□□□ 0.39
CAPN1-201ENST00000279247 IL12RB1P42701 662 aa17.51■□□□□ 0.39
CAPN1-201ENST00000279247 GPR1P46091 355 aa17.51■□□□□ 0.39
CAPN1-201ENST00000279247 NRF1Q16656 503 aa17.51■□□□□ 0.39
CAPN1-201ENST00000279247 CFAP206Q8IYR0 622 aa17.51■□□□□ 0.39
CAPN1-201ENST00000279247 SUSD6Q92537 303 aa17.51■□□□□ 0.39
CAPN1-201ENST00000279247 ROPN1LQ96C74 230 aa17.51■□□□□ 0.39
CAPN1-201ENST00000279247 SLC12A9Q9BXP2 914 aa17.51■□□□□ 0.39
CAPN1-201ENST00000279247 SFXN1Q9H9B4 322 aa17.51■□□□□ 0.39
CAPN1-201ENST00000279247 DLGAP2Q9P1A6 1054 aa17.51■□□□□ 0.39
CAPN1-201ENST00000279247 SUCOQ9UBS9 1254 aaKnown RBP17.51■□□□□ 0.39
CAPN1-201ENST00000279247 CD300AQ9UGN4 299 aa17.51■□□□□ 0.39
CAPN1-201ENST00000279247 TRPM6Q9BX84 2022 aa17.51■□□□□ 0.39
CAPN1-201ENST00000279247 ZNF106Q9H2Y7 1883 aaKnown RBP17.51■□□□□ 0.39
CAPN1-201ENST00000279247 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.51■□□□□ 0.39
CAPN1-201ENST00000279247 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.51■□□□□ 0.39
CAPN1-201ENST00000279247 MANBAO00462 879 aa17.51■□□□□ 0.39
CAPN1-201ENST00000279247 TIPRLO75663 272 aa17.51■□□□□ 0.39
CAPN1-201ENST00000279247 ASLP04424 464 aa17.51■□□□□ 0.39
CAPN1-201ENST00000279247 ZFP36L2P47974 494 aaKnown RBP17.51■□□□□ 0.39
CAPN1-201ENST00000279247 SF1Q15637 639 aaKnown RBP17.51■□□□□ 0.39
CAPN1-201ENST00000279247 DUSP6Q16828 381 aa17.51■□□□□ 0.39
CAPN1-201ENST00000279247 GAB4Q2WGN9 574 aa17.51■□□□□ 0.39
CAPN1-201ENST00000279247 HNRNPA1L2Q32P51 320 aaKnown RBP17.51■□□□□ 0.39
CAPN1-201ENST00000279247 TECPR1Q7Z6L1 1165 aa17.51■□□□□ 0.39
CAPN1-201ENST00000279247 CANT1Q8WVQ1 401 aa17.51■□□□□ 0.39
CAPN1-201ENST00000279247 SAMD11Q96NU1 681 aa17.51■□□□□ 0.39
CAPN1-201ENST00000279247 TSSK3Q96PN8 268 aa17.51■□□□□ 0.39
CAPN1-201ENST00000279247 RPP25Q9BUL9 199 aaKnown RBP17.51■□□□□ 0.39
CAPN1-201ENST00000279247 PLA2G2FQ9BZM2 168 aa17.51■□□□□ 0.39
CAPN1-201ENST00000279247 ACTL8Q9H568 366 aa17.51■□□□□ 0.39
CAPN1-201ENST00000279247 AP4S1Q9Y587 144 aa17.51■□□□□ 0.39
CAPN1-201ENST00000279247 RGS14O43566 566 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 FTH1P02794 183 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 CBSLP0DN79 551 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 C6P13671 934 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 CBSP35520 551 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 NAE1Q13564 534 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 VITQ6UXI7 678 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 KIAA2013Q8IYS2 634 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 C2orf73Q8N5S3 287 aaPredicted RBP17.5■□□□□ 0.39
CAPN1-201ENST00000279247 TERB1Q8NA31 727 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 WFIKKN2Q8TEU8 576 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 MSRAQ9UJ68 235 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 FAM149AA5PLN7 773 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 ARHGEF33A8MVX0 844 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 NUAK1O60285 661 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 NAA20P61599 178 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 FAM174BQ3ZCQ3 159 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 MTERF1Q99551 399 aaKnown RBP17.5■□□□□ 0.39
CAPN1-201ENST00000279247 FAM83CQ9BQN1 747 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 LRTM1Q9HBL6 345 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 TMEM98Q9Y2Y6 226 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 SPINT1O43278 529 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 AKAP10O43572 662 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 PRAMEF4O60810 478 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 B3GALT4O96024 378 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 C8GP07360 202 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 SEC13P55735 322 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 CHIT1Q13231 466 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.5■□□□□ 0.39
CAPN1-201ENST00000279247 PRAMEF9Q5VWM5 478 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 PDE12Q6L8Q7 609 aaKnown RBP17.5■□□□□ 0.39
CAPN1-201ENST00000279247 PDSS2Q86YH6 399 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 YAF2Q8IY57 180 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 DDHD1Q8NEL9 900 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 SPDYE1Q8NFV5 336 aaPredicted RBP17.5■□□□□ 0.39
CAPN1-201ENST00000279247 KLK6Q92876 244 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 GDF15Q99988 308 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 EBPLQ9BY08 206 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 BRINP2Q9C0B6 783 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 RDH14Q9HBH5 336 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 SLC52A3Q9NQ40 469 aa17.5■□□□□ 0.39
CAPN1-201ENST00000279247 LEF1Q9UJU2 399 aaPredicted RBP17.5■□□□□ 0.39
CAPN1-201ENST00000279247 DOCK8Q8NF50 2099 aa17.49■□□□□ 0.39
CAPN1-201ENST00000279247 ATG13O75143 517 aa17.49■□□□□ 0.39
CAPN1-201ENST00000279247 EBLN1P0CF75 366 aa17.49■□□□□ 0.39
CAPN1-201ENST00000279247 ADRB3P13945 408 aa17.49■□□□□ 0.39
CAPN1-201ENST00000279247 GNPDA1P46926 289 aa17.49■□□□□ 0.39
CAPN1-201ENST00000279247 EMX2Q04743 252 aa17.49■□□□□ 0.39
CAPN1-201ENST00000279247 DLX2Q07687 328 aaPredicted RBP17.49■□□□□ 0.39
CAPN1-201ENST00000279247 ADGRE1Q14246 886 aa17.49■□□□□ 0.39
CAPN1-201ENST00000279247 EGFLAMQ63HQ2 1017 aa17.49■□□□□ 0.39
CAPN1-201ENST00000279247 ANKRD46Q86W74 232 aa17.49■□□□□ 0.39
CAPN1-201ENST00000279247 PLPP6Q8IY26 295 aa17.49■□□□□ 0.39
CAPN1-201ENST00000279247 CHPFQ8IZ52 775 aa17.49■□□□□ 0.39
CAPN1-201ENST00000279247 ANKRD27Q96NW4 1050 aa17.49■□□□□ 0.39
CAPN1-201ENST00000279247 ACPTQ9BZG2 426 aa17.49■□□□□ 0.39
CAPN1-201ENST00000279247 SLC27A6Q9Y2P4 619 aa17.49■□□□□ 0.39
CAPN1-201ENST00000279247 LIPEQ05469 1076 aa17.49■□□□□ 0.39
CAPN1-201ENST00000279247 SPANXN4Q5MJ08 99 aa17.49■□□□□ 0.39
CAPN1-201ENST00000279247 ADNP2Q6IQ32 1131 aa17.49■□□□□ 0.39
CAPN1-201ENST00000279247 TRMT11Q7Z4G4 463 aaKnown RBP17.49■□□□□ 0.39
CAPN1-201ENST00000279247 ADGRG6Q86SQ4 1221 aa17.49■□□□□ 0.39
CAPN1-201ENST00000279247 EME1Q96AY2 570 aa17.49■□□□□ 0.39
CAPN1-201ENST00000279247 PPP3R2Q96LZ3 170 aa17.49■□□□□ 0.39
CAPN1-201ENST00000279247 FAM129BQ96TA1 746 aa17.49■□□□□ 0.39
CAPN1-201ENST00000279247 HOPXQ9BPY8 73 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms