RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 PPP3R2Q96LZ3 170 aa16.23■□□□□ 0.19
CCDC40-201ENST00000269318 GDF15Q99988 308 aa16.23■□□□□ 0.19
CCDC40-201ENST00000269318 HOPXQ9BPY8 73 aaPredicted RBP16.23■□□□□ 0.19
CCDC40-201ENST00000269318 CLEC1BQ9P126 229 aa16.23■□□□□ 0.19
CCDC40-201ENST00000269318 ABCD2Q9UBJ2 740 aa16.23■□□□□ 0.19
CCDC40-201ENST00000269318 BCAP29Q9UHQ4 241 aa16.23■□□□□ 0.19
CCDC40-201ENST00000269318 FAM234BA2RU67 622 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 SLC28A1O00337 649 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 RGS14O43566 566 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 EEDO75530 441 aaKnown RBP16.22■□□□□ 0.19
CCDC40-201ENST00000269318 G6PDP11413 515 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 TCN1P20061 433 aaPredicted RBP16.22■□□□□ 0.19
CCDC40-201ENST00000269318 GDI1P31150 447 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 PREPP48147 710 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 POLR2JP52435 117 aaKnown RBP16.22■□□□□ 0.19
CCDC40-201ENST00000269318 SLC7A2P52569 658 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 KCNK10P57789 538 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 CNTN1Q12860 1018 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 MUM1Q2TAK8 710 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 SMU1Q2TAY7 513 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 SYTL3Q4VX76 610 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 SAMD4BQ5PRF9 694 aaKnown RBP16.22■□□□□ 0.19
CCDC40-201ENST00000269318 PIP5KL1Q5T9C9 394 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 TRIM74Q86UV6 250 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 KBTBD2Q8IY47 623 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 SLC22A15Q8IZD6 547 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 BHLHE22Q8NFJ8 381 aaPredicted RBP16.22■□□□□ 0.19
CCDC40-201ENST00000269318 RAB7BQ96AH8 199 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 PYCR2Q96C36 320 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 NAF1Q96HR8 494 aaKnown RBP16.22■□□□□ 0.19
CCDC40-201ENST00000269318 RPP25Q9BUL9 199 aaKnown RBP16.22■□□□□ 0.19
CCDC40-201ENST00000269318 ACTR8Q9H981 624 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 FAM8A1Q9UBU6 413 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 ZNF490Q9ULM2 529 aaPredicted RBP16.22■□□□□ 0.19
CCDC40-201ENST00000269318 FADS3Q9Y5Q0 445 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 PABPN1LA6NDY0 278 aaKnown RBP16.22■□□□□ 0.19
CCDC40-201ENST00000269318 LZTS3O60299 673 aaPredicted RBP16.22■□□□□ 0.19
CCDC40-201ENST00000269318 RPSAP08865 295 aaKnown RBP16.22■□□□□ 0.19
CCDC40-201ENST00000269318 GPR1P46091 355 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 PFN3P60673 137 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 ABRQ12979 859 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 ADAM15Q13444 863 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 TLR1Q15399 786 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 IL23RQ5VWK5 629 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 RAET1GQ6H3X3 334 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 PRMT9Q6P2P2 845 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 CYP20A1Q6UW02 462 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 ZFAND4Q86XD8 727 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 L3MBTL4Q8NA19 623 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 PPFIBP2Q8ND30 876 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 VPS33AQ96AX1 596 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 ERLEC1Q96DZ1 483 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 SLC22A14Q9Y267 594 aa16.22■□□□□ 0.19
CCDC40-201ENST00000269318 CEP290O15078 2479 aa16.21■□□□□ 0.19
CCDC40-201ENST00000269318 PRAMEF4O60810 478 aa16.21■□□□□ 0.19
CCDC40-201ENST00000269318 ACADSP16219 412 aa16.21■□□□□ 0.19
CCDC40-201ENST00000269318 ATP6V1C1P21283 382 aa16.21■□□□□ 0.19
CCDC40-201ENST00000269318 DRD3P35462 400 aa16.21■□□□□ 0.19
CCDC40-201ENST00000269318 HMGCS1Q01581 520 aa16.21■□□□□ 0.19
CCDC40-201ENST00000269318 FOXM1Q08050 763 aa16.21■□□□□ 0.19
CCDC40-201ENST00000269318 TRAP1Q12931 704 aaKnown RBP16.21■□□□□ 0.19
CCDC40-201ENST00000269318 ITPRIPL2Q3MIP1 535 aa16.21■□□□□ 0.19
CCDC40-201ENST00000269318 C6orf10Q5SRN2 563 aa16.21■□□□□ 0.19
CCDC40-201ENST00000269318 PRAMEF9Q5VWM5 478 aa16.21■□□□□ 0.19
CCDC40-201ENST00000269318 XKR5Q6UX68 686 aa16.21■□□□□ 0.19
CCDC40-201ENST00000269318 RGL4Q8IZJ4 473 aa16.21■□□□□ 0.19
CCDC40-201ENST00000269318 FOXJ1Q92949 421 aa16.21■□□□□ 0.19
CCDC40-201ENST00000269318 LRRC58Q96CX6 371 aa16.21■□□□□ 0.19
CCDC40-201ENST00000269318 ZCCHC2Q9C0B9 1178 aaKnown RBP16.21■□□□□ 0.19
CCDC40-201ENST00000269318 PCDHAC1Q9H158 963 aa16.21■□□□□ 0.19
CCDC40-201ENST00000269318 IL1RL2Q9HB29 575 aa16.21■□□□□ 0.19
CCDC40-201ENST00000269318 DNAJC11Q9NVH1 559 aa16.21■□□□□ 0.19
CCDC40-201ENST00000269318 GID8Q9NWU2 228 aa16.21■□□□□ 0.19
CCDC40-201ENST00000269318 ZNHIT2Q9UHR6 403 aa16.21■□□□□ 0.19
CCDC40-201ENST00000269318 PSMD13Q9UNM6 376 aa16.21■□□□□ 0.19
CCDC40-201ENST00000269318 POLR3HQ9Y535 204 aaPredicted RBP16.21■□□□□ 0.19
CCDC40-201ENST00000269318 STON1Q9Y6Q2 735 aa16.21■□□□□ 0.19
CCDC40-201ENST00000269318 CCDC154A6NI56 674 aa16.2■□□□□ 0.18
CCDC40-201ENST00000269318 NME4O00746 187 aa16.2■□□□□ 0.18
CCDC40-201ENST00000269318 APODP05090 189 aa16.2■□□□□ 0.18
CCDC40-201ENST00000269318 SLC6A2P23975 617 aa16.2■□□□□ 0.18
CCDC40-201ENST00000269318 PDHA2P29803 388 aa16.2■□□□□ 0.18
CCDC40-201ENST00000269318 YBX1P67809 324 aaKnown RBP16.2■□□□□ 0.18
CCDC40-201ENST00000269318 MRPS22P82650 360 aaKnown RBP16.2■□□□□ 0.18
CCDC40-201ENST00000269318 PRKG2Q13237 762 aa16.2■□□□□ 0.18
CCDC40-201ENST00000269318 CPSF6Q16630 551 aaKnown RBP eCLIP16.2■□□□□ 0.18
CCDC40-201ENST00000269318 PAGE3Q5JUK9 113 aa16.2■□□□□ 0.18
CCDC40-201ENST00000269318 ZFP1Q6P2D0 407 aa16.2■□□□□ 0.18
CCDC40-201ENST00000269318 ATG10Q9H0Y0 220 aa16.2■□□□□ 0.18
CCDC40-201ENST00000269318 OR2AG1Q9H205 316 aa16.2■□□□□ 0.18
CCDC40-201ENST00000269318 TRIM39Q9HCM9 518 aa16.2■□□□□ 0.18
CCDC40-201ENST00000269318 NPC1O15118 1278 aa16.2■□□□□ 0.18
CCDC40-201ENST00000269318 KRT6AP02538 564 aa16.2■□□□□ 0.18
CCDC40-201ENST00000269318 KRT6BP04259 564 aa16.2■□□□□ 0.18
CCDC40-201ENST00000269318 SLC2A4P14672 509 aa16.2■□□□□ 0.18
CCDC40-201ENST00000269318 JAK1P23458 1154 aa16.2■□□□□ 0.18
CCDC40-201ENST00000269318 ITPKAP23677 461 aa16.2■□□□□ 0.18
CCDC40-201ENST00000269318 MAP4P27816 1152 aaKnown RBP16.2■□□□□ 0.18
CCDC40-201ENST00000269318 MAPK9P45984 424 aa16.2■□□□□ 0.18
CCDC40-201ENST00000269318 GNPDA1P46926 289 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms