RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 SLC26A3P40879 764 aa11.29□□□□□ -0.6
PFDN1-201ENST00000261813 ABCG1P45844 678 aa11.29□□□□□ -0.6
PFDN1-201ENST00000261813 FASLGP48023 281 aa11.29□□□□□ -0.6
PFDN1-201ENST00000261813 UBE2IP63279 158 aaKnown RBP11.29□□□□□ -0.6
PFDN1-201ENST00000261813 BOP1Q14137 746 aaKnown RBP11.29□□□□□ -0.6
PFDN1-201ENST00000261813 USP10Q14694 798 aaKnown RBP11.29□□□□□ -0.6
PFDN1-201ENST00000261813 KIR2DS5Q14953 304 aa11.29□□□□□ -0.6
PFDN1-201ENST00000261813 TUBB8Q3ZCM7 444 aa11.29□□□□□ -0.6
PFDN1-201ENST00000261813 TAF1BQ53T94 588 aaPredicted RBP11.29□□□□□ -0.6
PFDN1-201ENST00000261813 CCDC157Q569K6 752 aa11.29□□□□□ -0.6
PFDN1-201ENST00000261813 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.29□□□□□ -0.6
PFDN1-201ENST00000261813 CNSTQ6PJW8 725 aa11.29□□□□□ -0.6
PFDN1-201ENST00000261813 UNQ6494/PRO21346Q6UXR6 183 aa11.29□□□□□ -0.6
PFDN1-201ENST00000261813 ZNF438Q7Z4V0 828 aa11.29□□□□□ -0.6
PFDN1-201ENST00000261813 EXOC3L1Q86VI1 746 aa11.29□□□□□ -0.6
PFDN1-201ENST00000261813 SRRM1Q8IYB3 904 aaKnown RBP11.29□□□□□ -0.6
PFDN1-201ENST00000261813 OR6C4Q8NGE1 309 aa11.29□□□□□ -0.6
PFDN1-201ENST00000261813 NAT6Q93015 286 aa11.29□□□□□ -0.6
PFDN1-201ENST00000261813 ISL2Q96A47 359 aa11.29□□□□□ -0.6
PFDN1-201ENST00000261813 RMDN2Q96LZ7 410 aa11.29□□□□□ -0.6
PFDN1-201ENST00000261813 TSNARE1Q96NA8 513 aa11.29□□□□□ -0.6
PFDN1-201ENST00000261813 INSM2Q96T92 566 aaPredicted RBP11.29□□□□□ -0.6
PFDN1-201ENST00000261813 CCDC3Q9BQI4 270 aa11.29□□□□□ -0.6
PFDN1-201ENST00000261813 IQCGQ9H095 443 aaKnown RBP11.29□□□□□ -0.6
PFDN1-201ENST00000261813 OR52A5Q9H2C5 316 aa11.29□□□□□ -0.6
PFDN1-201ENST00000261813 ZFAND3Q9H8U3 227 aa11.29□□□□□ -0.6
PFDN1-201ENST00000261813 POPDC3Q9HBV1 291 aa11.29□□□□□ -0.6
PFDN1-201ENST00000261813 LRIT1Q9P2V4 623 aa11.29□□□□□ -0.6
PFDN1-201ENST00000261813 GALPQ9UBC7 116 aa11.29□□□□□ -0.6
PFDN1-201ENST00000261813 CTNNAL1Q9UBT7 734 aa11.29□□□□□ -0.6
PFDN1-201ENST00000261813 DCDC2Q9UHG0 476 aa11.29□□□□□ -0.6
PFDN1-201ENST00000261813 ACSL5Q9ULC5 683 aa11.29□□□□□ -0.6
PFDN1-201ENST00000261813 MED16Q9Y2X0 877 aa11.29□□□□□ -0.6
PFDN1-201ENST00000261813 CEP295Q9C0D2 2601 aa11.29□□□□□ -0.6
PFDN1-201ENST00000261813 CNOT1A5YKK6 2376 aaKnown RBP11.29□□□□□ -0.6
PFDN1-201ENST00000261813 A0A087X1B8 175 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 FAM95CA0A1B0GW59 222 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 LIN7AO14910 233 aaPredicted RBP11.28□□□□□ -0.6
PFDN1-201ENST00000261813 NUDT21O43809 227 aaKnown RBP11.28□□□□□ -0.6
PFDN1-201ENST00000261813 GPC4O75487 556 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 PIAS1O75925 651 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 XRCC1P18887 633 aaPredicted RBP11.28□□□□□ -0.6
PFDN1-201ENST00000261813 KRT4P19013 534 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 AOAHP28039 575 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 HHEXQ03014 270 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 RPA4Q13156 261 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 ILKQ13418 452 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 NR1D2Q14995 579 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 RPE65Q16518 533 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 SYTL3Q4VX76 610 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 TTMPQ5BVD1 217 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 CAPRIN2Q6IMN6 1127 aaKnown RBP11.28□□□□□ -0.6
PFDN1-201ENST00000261813 DUS1LQ6P1R4 473 aaKnown RBP11.28□□□□□ -0.6
PFDN1-201ENST00000261813 DHRS13Q6UX07 377 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 SLC9B2Q86UD5 537 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 ZNF761Q86XN6 746 aaPredicted RBP11.28□□□□□ -0.6
PFDN1-201ENST00000261813 VRK3Q8IV63 474 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 GPATCH11Q8N954 259 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 MZB1Q8WU39 189 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 FAM136AQ96C01 138 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 PANX3Q96QZ0 392 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 AARSD1Q9BTE6 412 aaKnown RBP11.28□□□□□ -0.6
PFDN1-201ENST00000261813 SYTL2Q9HCH5 934 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 SARS2Q9NP81 518 aaKnown RBP11.28□□□□□ -0.6
PFDN1-201ENST00000261813 POT1Q9NUX5 634 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 TAS2R13Q9NYV9 303 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 KLHL42Q9P2K6 505 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 CPNE7Q9UBL6 633 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 RALYQ9UKM9 306 aaKnown RBP11.28□□□□□ -0.6
PFDN1-201ENST00000261813 SLC39A10Q9ULF5 831 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 CDYLQ9Y232 598 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 APOBEC2Q9Y235 224 aaKnown RBP11.28□□□□□ -0.6
PFDN1-201ENST00000261813 CFAP20Q9Y6A4 193 aaKnown RBP11.28□□□□□ -0.6
PFDN1-201ENST00000261813 ARHGEF17Q96PE2 2063 aaPredicted RBP11.28□□□□□ -0.6
PFDN1-201ENST00000261813 CCDC189A1A4V9 331 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 TMEM8BA6NDV4 472 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 RHPN2P1A8MT19 583 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 COPEO14579 308 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 KPNA5O15131 536 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 PRPF4O43172 522 aaKnown RBP eCLIP11.28□□□□□ -0.6
PFDN1-201ENST00000261813 VPS26AO75436 327 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 ZWINTO95229 277 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 GSTA1P08263 222 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 SLC35G4P0C7Q5 338 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 MTHFD1P11586 935 aaKnown RBP11.28□□□□□ -0.6
PFDN1-201ENST00000261813 PNLIPP16233 465 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 NR1D1P20393 614 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 OAS2P29728 719 aaKnown RBP11.28□□□□□ -0.6
PFDN1-201ENST00000261813 CRHR1P34998 444 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 HALP42357 657 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 KPNA2P52292 529 aaKnown RBP11.28□□□□□ -0.6
PFDN1-201ENST00000261813 CLDN6P56747 220 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 RAB10P61026 200 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 PPP2R2AP63151 447 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 INSM1Q01101 510 aaPredicted RBP11.28□□□□□ -0.6
PFDN1-201ENST00000261813 SLC18A2Q05940 514 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 HSPA14Q0VDF9 509 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 RBM20Q5T481 1227 aaKnown RBP11.28□□□□□ -0.6
PFDN1-201ENST00000261813 HECTD2Q5U5R9 776 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 RAPH1Q70E73 1250 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms