RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 SERPINA6P08185 405 aa13□□□□□ -0.33
NEK9-201ENST00000238616 APLP1P51693 650 aa13□□□□□ -0.33
NEK9-201ENST00000238616 DSG2Q14126 1118 aa13□□□□□ -0.33
NEK9-201ENST00000238616 RBM39Q14498 530 aaKnown RBP13□□□□□ -0.33
NEK9-201ENST00000238616 CLCA4Q14CN2 919 aa13□□□□□ -0.33
NEK9-201ENST00000238616 PDGFRLQ15198 375 aa13□□□□□ -0.33
NEK9-201ENST00000238616 TMEM17Q86X19 198 aa13□□□□□ -0.33
NEK9-201ENST00000238616 TWIST2Q8WVJ9 160 aa13□□□□□ -0.33
NEK9-201ENST00000238616 UCK2Q9BZX2 261 aa13□□□□□ -0.33
NEK9-201ENST00000238616 FN3KQ9H479 309 aa13□□□□□ -0.33
NEK9-201ENST00000238616 B3GAT2Q9NPZ5 323 aa13□□□□□ -0.33
NEK9-201ENST00000238616 TMEM51Q9NW97 253 aa13□□□□□ -0.33
NEK9-201ENST00000238616 ZNF521Q96K83 1311 aa13□□□□□ -0.33
NEK9-201ENST00000238616 A0A0J9YVX5 310 aa13□□□□□ -0.33
NEK9-201ENST00000238616 SHMT1P34896 483 aa13□□□□□ -0.33
NEK9-201ENST00000238616 CDH12P55289 794 aa13□□□□□ -0.33
NEK9-201ENST00000238616 PPIGQ13427 754 aaKnown RBP eCLIP13□□□□□ -0.336e-7■■■□□ 15.2
NEK9-201ENST00000238616 VPS26BQ4G0F5 336 aa13□□□□□ -0.33
NEK9-201ENST00000238616 ARSKQ6UWY0 536 aa13□□□□□ -0.33
NEK9-201ENST00000238616 SPATA19Q7Z5L4 167 aa13□□□□□ -0.33
NEK9-201ENST00000238616 DHDDSQ86SQ9 333 aa13□□□□□ -0.33
NEK9-201ENST00000238616 ATAD1Q8NBU5 361 aa13□□□□□ -0.33
NEK9-201ENST00000238616 PNPLA3Q9NST1 481 aa13□□□□□ -0.33
NEK9-201ENST00000238616 FER1L5A0AVI2 2057 aa13□□□□□ -0.33
NEK9-201ENST00000238616 PXDNLA1KZ92 1463 aa13□□□□□ -0.33
NEK9-201ENST00000238616 MDFIC2A0A1B0GVS7 189 aa13□□□□□ -0.33
NEK9-201ENST00000238616 ELOVL7A1L3X0 281 aa13□□□□□ -0.33
NEK9-201ENST00000238616 RPP40O75818 363 aaKnown RBP13□□□□□ -0.33
NEK9-201ENST00000238616 CPN2P22792 545 aa13□□□□□ -0.33
NEK9-201ENST00000238616 GADD45AP24522 165 aa13□□□□□ -0.33
NEK9-201ENST00000238616 LAPTM5Q13571 262 aa13□□□□□ -0.33
NEK9-201ENST00000238616 RNASEH2BQ5TBB1 312 aaKnown RBP13□□□□□ -0.33
NEK9-201ENST00000238616 AMZ2Q86W34 360 aa13□□□□□ -0.33
NEK9-201ENST00000238616 ZFPM1Q8IX07 1006 aa13□□□□□ -0.33
NEK9-201ENST00000238616 JAGN1Q8N5M9 183 aa13□□□□□ -0.33
NEK9-201ENST00000238616 OR4K17Q8NGC6 315 aa13□□□□□ -0.33
NEK9-201ENST00000238616 TNFRSF25Q93038 417 aa13□□□□□ -0.33
NEK9-201ENST00000238616 TTYH1Q9H313 450 aaPredicted RBP13□□□□□ -0.33
NEK9-201ENST00000238616 MEAF6Q9HAF1 191 aa13□□□□□ -0.33
NEK9-201ENST00000238616 ABCD2Q9UBJ2 740 aa13□□□□□ -0.33
NEK9-201ENST00000238616 NOBOXO60393 691 aa13□□□□□ -0.33
NEK9-201ENST00000238616 MAGEA11P43364 429 aa13□□□□□ -0.33
NEK9-201ENST00000238616 WNT3AP56704 352 aa13□□□□□ -0.33
NEK9-201ENST00000238616 COL9A2Q14055 689 aaPredicted RBP13□□□□□ -0.33
NEK9-201ENST00000238616 ZNF460Q14592 562 aa13□□□□□ -0.33
NEK9-201ENST00000238616 PARP15Q460N3 678 aa13□□□□□ -0.33
NEK9-201ENST00000238616 TAS1R3Q7RTX0 852 aa13□□□□□ -0.33
NEK9-201ENST00000238616 PPTC7Q8NI37 304 aa13□□□□□ -0.33
NEK9-201ENST00000238616 ADAD1Q96M93 576 aaKnown RBP13□□□□□ -0.33
NEK9-201ENST00000238616 ORAI3Q9BRQ5 295 aa13□□□□□ -0.33
NEK9-201ENST00000238616 PCDH18Q9HCL0 1135 aa13□□□□□ -0.33
NEK9-201ENST00000238616 PPP1R14DQ9NXH3 145 aa13□□□□□ -0.33
NEK9-201ENST00000238616 C15orf41Q9Y2V0 281 aa13□□□□□ -0.33
NEK9-201ENST00000238616 MUSKO15146 869 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 CCR8P51685 355 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 CDH11P55287 796 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 VASH1Q7L8A9 365 aaPredicted RBP12.99□□□□□ -0.33
NEK9-201ENST00000238616 TMED4Q7Z7H5 227 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 HMCESQ96FZ2 354 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 DMRTB1Q96MA1 342 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 CDT1Q9H211 546 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 TRNAU1APQ9NX07 287 aaKnown RBP12.99□□□□□ -0.33
NEK9-201ENST00000238616 C14orf166Q9Y224 244 aaKnown RBP12.99□□□□□ -0.33
NEK9-201ENST00000238616 TREHO43280 583 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 GRIK2Q13002 908 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 PLGLAQ15195 96 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 CRTC2Q53ET0 693 aaPredicted RBP12.99□□□□□ -0.33
NEK9-201ENST00000238616 TTMPQ5BVD1 217 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 CUZD1Q86UP6 607 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 COMTD1Q86VU5 262 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 TBC1D21Q8IYX1 336 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 DCAKDQ8WVC6 231 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 UFD1Q92890 307 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 NIFKQ9BYG3 293 aaKnown RBP12.99□□□□□ -0.33
NEK9-201ENST00000238616 RIOX1Q9H6W3 641 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 IFNW1P05000 195 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 SLC3A1Q07837 685 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 PLCZ1Q86YW0 608 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 STYXQ8WUJ0 223 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 TIFAQ96CG3 184 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 GPR21Q99679 349 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 EHD4Q9H223 541 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 EURLQ9NYK6 297 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 R3HDM2Q9Y2K5 976 aaKnown RBP12.99□□□□□ -0.33
NEK9-201ENST00000238616 UNC13CQ8NB66 2214 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 PRPF38BQ5VTL8 546 aaKnown RBP12.99□□□□□ -0.33
NEK9-201ENST00000238616 GLYATQ6IB77 296 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 YIPF7Q8N8F6 280 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 ARL14EPQ8N8R7 260 aaPredicted RBP12.99□□□□□ -0.33
NEK9-201ENST00000238616 FAM47BQ8NA70 645 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 ANKRD7Q92527 254 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 MMABQ96EY8 250 aaPredicted RBP12.99□□□□□ -0.33
NEK9-201ENST00000238616 GDF3Q9NR23 364 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 SCN8AQ9UQD0 1980 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 BTBD19C9JJ37 291 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 PPEF2O14830 753 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 RPL17P18621 184 aaKnown RBP12.99□□□□□ -0.33
NEK9-201ENST00000238616 PITPNAQ00169 270 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 CACNG1Q06432 222 aa12.99□□□□□ -0.33
NEK9-201ENST00000238616 TMEM126BQ8IUX1 230 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms