RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 MYH9P35579 1960 aaKnown RBP8.08□□□□□ -1.12
APOB-201ENST00000233242 FXYD6-FXYD2A0A087WZ82 144 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 ATG13O75143 517 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 PAGE1O75459 146 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 UNGP13051 313 aaPredicted RBP8.08□□□□□ -1.12
APOB-201ENST00000233242 CLCN4P51793 760 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 MPPE1Q53F39 396 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 PPP1R26Q5T8A7 1209 aaPredicted RBP8.08□□□□□ -1.12
APOB-201ENST00000233242 RHBDF2Q6PJF5 856 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 CFAP206Q8IYR0 622 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 MAFIPQ8WZ33 124 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 SLC9A6Q92581 669 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 FXYD6Q9H0Q3 95 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 HCN2Q9UL51 889 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 NRCAMQ92823 1304 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 SPATA31C2B4DYI2 1134 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 TRAM1Q15629 374 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 NAT8LQ8N9F0 302 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 SPERTQ8NA61 448 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 XAGE5Q8WWM1 108 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 TREM1Q9NP99 234 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 TAS2R9Q9NYW1 312 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 OR2L5Q8NG80 312 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 PCDHAC1Q9H158 963 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 IKZF2Q9UKS7 526 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 FOXO6A8MYZ6 492 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 IL1BP01584 269 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 GIMD1P0DJR0 217 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 GSTM2P28161 218 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 APLP1P51693 650 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 DPYSL2Q16555 572 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 HACD2Q6Y1H2 254 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 OR10H5Q8NGA6 315 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 GTPBP3Q969Y2 492 aaKnown RBP8.08□□□□□ -1.12
APOB-201ENST00000233242 IQCMA0A1B0GVH7 501 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 MRPS14O60783 128 aaKnown RBP8.08□□□□□ -1.12
APOB-201ENST00000233242 MTHFD1P11586 935 aaKnown RBP8.08□□□□□ -1.12
APOB-201ENST00000233242 SMSP52788 366 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 FADDQ13158 208 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 RAPSNQ13702 412 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 OR4K2Q8NGD2 314 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 PCDHGA11Q9Y5H2 935 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 TIMM13Q9Y5L4 95 aaPredicted RBP8.08□□□□□ -1.12
APOB-201ENST00000233242 HTR3EA5X5Y0 456 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 GRM5P41594 1212 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 PFKPQ01813 784 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 CREMQ03060 361 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 SYT16Q17RD7 645 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 FAM171A1Q5VUB5 890 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 ASRGL1Q7L266 308 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 DENND1CQ8IV53 801 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 TIGD4Q8IY51 512 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 MFSD3Q96ES6 412 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 MCMBPQ9BTE3 642 aa8.08□□□□□ -1.12
APOB-201ENST00000233242 INMT-MINDY4F8WBC2 141 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 CHRNB2P17787 502 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 ICAM3P32942 547 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 DSG2Q14126 1118 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 PTGR1Q14914 329 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 CELF3Q5SZQ8 465 aaKnown RBP8.07□□□□□ -1.12
APOB-201ENST00000233242 CDCA2Q69YH5 1023 aaPredicted RBP8.07□□□□□ -1.12
APOB-201ENST00000233242 MED27Q6P2C8 311 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 METTL25Q8N6Q8 603 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 BTBD1Q9H0C5 482 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 MAP4K5Q9Y4K4 846 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 GLYATL1P3A0A0U1RQE8 302 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 ABHD14A-ACY1A0A1B0GW23 586 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 TRIM3O75382 744 aaPredicted RBP8.07□□□□□ -1.12
APOB-201ENST00000233242 AP2S1P53680 142 aaPredicted RBP8.07□□□□□ -1.12
APOB-201ENST00000233242 ZDHHC6Q9H6R6 413 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 B3GNT3Q9Y2A9 372 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 MATN3O15232 486 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 RFPL1O75677 317 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 SSR2P43308 183 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 HLCSP50747 726 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 RPS14P62263 151 aaKnown RBP8.07□□□□□ -1.12
APOB-201ENST00000233242 DOK6Q6PKX4 331 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 PIWIL1Q96J94 861 aaKnown RBP8.07□□□□□ -1.12
APOB-201ENST00000233242 PAK1IP1Q9NWT1 392 aaPredicted RBP8.07□□□□□ -1.12
APOB-201ENST00000233242 MROH2AA6NES4 1674 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 CCL15-CCL14A0A0B4J2E2 113 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 VARSP26640 1264 aaKnown RBP8.07□□□□□ -1.12
APOB-201ENST00000233242 DNAJB13P59910 316 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 CCL15Q16663 113 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 C1orf216Q8TAB5 229 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 HYLS1Q96M11 299 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 ABHD16BQ9H3Z7 469 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 SLA2Q9H6Q3 261 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 CCM2LQ9NUG4 571 aaPredicted RBP8.07□□□□□ -1.12
APOB-201ENST00000233242 PRKCHP24723 683 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 AGTR1P30556 359 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 TXNL4AP83876 142 aaKnown RBP8.07□□□□□ -1.12
APOB-201ENST00000233242 TARDBPQ13148 414 aaKnown RBP eCLIP8.07□□□□□ -1.12
APOB-201ENST00000233242 PON3Q15166 354 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 RABL3Q5HYI8 236 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 C9orf64Q5T6V5 341 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 FAAH2Q6GMR7 532 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 INTS5Q6P9B9 1019 aaKnown RBP8.07□□□□□ -1.12
APOB-201ENST00000233242 SNX20Q7Z614 316 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 SIX2Q9NPC8 291 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms