RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 CFAP20Q9Y6A4 193 aaKnown RBP13.67□□□□□ -0.22
SEC61B-201ENST00000223641 ARID1BQ8NFD5 2236 aaPredicted RBP13.66□□□□□ -0.22
SEC61B-201ENST00000223641 CABIN1Q9Y6J0 2220 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 LNP1A1A4G5 178 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 PROB1E7EW31 1015 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 UBXN8O00124 270 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 BIRC5O15392 142 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 PCDHGA12O60330 932 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 NOBOXO60393 691 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 DLX3O60479 287 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 LRP3O75074 770 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 BPGMP07738 259 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 ANXA6P08133 673 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 ERGP11308 486 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 CPA3P15088 417 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 CHN1P15882 459 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 ATP5F1P24539 256 aaPredicted RBP13.66□□□□□ -0.22
SEC61B-201ENST00000223641 GGT5P36269 586 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 FASLGP48023 281 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 SERPINB4P48594 390 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 CCT8P50990 548 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 ZXDCQ2QGD7 858 aaPredicted RBP13.66□□□□□ -0.22
SEC61B-201ENST00000223641 TCEAL6Q6IPX3 200 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 DUS1LQ6P1R4 473 aaKnown RBP13.66□□□□□ -0.22
SEC61B-201ENST00000223641 SFTPA2Q8IWL1 248 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 ANKRD42Q8N9B4 389 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 GPR156Q8NFN8 814 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 OR9A1PQ8NGU1 263 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 OR6Y1Q8NGX8 325 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 SLC37A2Q8TED4 501 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 PATE1Q8WXA2 126 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 TCEAL3Q969E4 200 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 RHBDF1Q96CC6 855 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 CCDC138Q96M89 665 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 FERD3LQ96RJ6 166 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 TRIM54Q9BYV2 358 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 TWSG1Q9GZX9 223 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 TRIT1Q9H3H1 467 aaKnown RBP13.66□□□□□ -0.22
SEC61B-201ENST00000223641 KIR3DX1Q9H7L2 352 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 SLC40A1Q9NP59 571 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 POT1Q9NUX5 634 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 IMP3Q9NV31 184 aaKnown RBP13.66□□□□□ -0.22
SEC61B-201ENST00000223641 OXSMQ9NWU1 459 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 NKIRAS1Q9NYS0 192 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 SIRPGQ9P1W8 387 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 POLG2Q9UHN1 485 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 PTBP2Q9UKA9 531 aaKnown RBP13.66□□□□□ -0.22
SEC61B-201ENST00000223641 COLEC10Q9Y6Z7 277 aa13.66□□□□□ -0.22
SEC61B-201ENST00000223641 GPR179Q6PRD1 2367 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 A8MT66 165 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 STX16-NPEPL1H3BU86 382 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 STX16O14662 325 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 IPO13O94829 963 aaKnown RBP13.65□□□□□ -0.22
SEC61B-201ENST00000223641 LMNAP02545 664 aaKnown RBP13.65□□□□□ -0.22
SEC61B-201ENST00000223641 ANXA5P08758 320 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 HIST1H2AGP0C0S8 130 aaPredicted RBP13.65□□□□□ -0.22
SEC61B-201ENST00000223641 MYL2P10916 166 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 TAC1P20366 129 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 HIST1H2ADP20671 130 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 MAP4P27816 1152 aaKnown RBP13.65□□□□□ -0.22
SEC61B-201ENST00000223641 BDKRB1P46663 353 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 HNMTP50135 292 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 PRKAA2P54646 552 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 ALDH18A1P54886 795 aaKnown RBP13.65□□□□□ -0.22
SEC61B-201ENST00000223641 DNAJB13P59910 316 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 DEFB133Q30KQ1 61 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 C6orf132Q5T0Z8 1188 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.65□□□□□ -0.22
SEC61B-201ENST00000223641 TTC23LQ6PF05 361 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 FRA10AC1Q70Z53 315 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 SLC22A9Q8IVM8 553 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 KLHDC8AQ8IYD2 350 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 MINDY1Q8N5J2 469 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 FAM76AQ8TAV0 307 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 FBXL8Q96CD0 374 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 CCDC126Q96EE4 140 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 HIST1H2AHQ96KK5 128 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 CAMK1GQ96NX5 476 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 PKP4Q99569 1192 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 HIST1H2AJQ99878 128 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 H2AFJQ9BTM1 129 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 DUSP23Q9BVJ7 150 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 C1QTNF3Q9BXJ4 246 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 DNAAF2Q9NVR5 837 aaKnown RBP13.65□□□□□ -0.22
SEC61B-201ENST00000223641 UTP6Q9NYH9 597 aaKnown RBP13.65□□□□□ -0.22
SEC61B-201ENST00000223641 NLGN3Q9NZ94 848 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 CPNE7Q9UBL6 633 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 GMEB2Q9UKD1 530 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 DOLKQ9UPQ8 538 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 PCDHGB2Q9Y5G2 931 aa13.65□□□□□ -0.22
SEC61B-201ENST00000223641 PRAMEF33A0A0G2JMD5 474 aa13.64□□□□□ -0.23
SEC61B-201ENST00000223641 KRT87PA6NCN2 255 aa13.64□□□□□ -0.23
SEC61B-201ENST00000223641 B4DGG1 531 aa13.64□□□□□ -0.23
SEC61B-201ENST00000223641 SUPT3HB4E1H0 165 aa13.64□□□□□ -0.23
SEC61B-201ENST00000223641 TAPBPO15533 448 aa13.64□□□□□ -0.23
SEC61B-201ENST00000223641 SMIM24O75264 130 aa13.64□□□□□ -0.23
SEC61B-201ENST00000223641 SUPT3HO75486 399 aa13.64□□□□□ -0.23
SEC61B-201ENST00000223641 SLC16A8O95907 504 aa13.64□□□□□ -0.23
SEC61B-201ENST00000223641 TGM1P22735 817 aa13.64□□□□□ -0.23
SEC61B-201ENST00000223641 IMPA1P29218 277 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms