RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 AP2A2O94973 939 aa14.52□□□□□ -0.09
UPK3A-201ENST00000216211 CAPN1P07384 714 aa14.52□□□□□ -0.09
UPK3A-201ENST00000216211 RAB40ALP0C0E4 278 aa14.52□□□□□ -0.09
UPK3A-201ENST00000216211 SRSF1Q07955 248 aaKnown RBP eCLIP14.52□□□□□ -0.09
UPK3A-201ENST00000216211 PTCHD3Q3KNS1 767 aa14.52□□□□□ -0.09
UPK3A-201ENST00000216211 NAPRTQ6XQN6 538 aa14.52□□□□□ -0.09
UPK3A-201ENST00000216211 CDHR3Q6ZTQ4 885 aa14.52□□□□□ -0.09
UPK3A-201ENST00000216211 SYTL1Q8IYJ3 562 aa14.52□□□□□ -0.09
UPK3A-201ENST00000216211 SYCE1Q8N0S2 351 aa14.52□□□□□ -0.09
UPK3A-201ENST00000216211 CEP112Q8N8E3 955 aa14.52□□□□□ -0.09
UPK3A-201ENST00000216211 OR52K1Q8NGK4 314 aa14.52□□□□□ -0.09
UPK3A-201ENST00000216211 SLC35B2Q8TB61 432 aa14.52□□□□□ -0.09
UPK3A-201ENST00000216211 ADAMTS17Q8TE56 1095 aa14.52□□□□□ -0.09
UPK3A-201ENST00000216211 ELMO1Q92556 727 aa14.52□□□□□ -0.09
UPK3A-201ENST00000216211 NLNQ9BYT8 704 aa14.52□□□□□ -0.09
UPK3A-201ENST00000216211 SLC7A5P2Q9GIP4 190 aa14.52□□□□□ -0.09
UPK3A-201ENST00000216211 SERTAD3Q9UJW9 196 aa14.52□□□□□ -0.09
UPK3A-201ENST00000216211 TCFL5Q9UL49 500 aa14.52□□□□□ -0.09
UPK3A-201ENST00000216211 CLEC18AA5D8T8 446 aa14.51□□□□□ -0.09
UPK3A-201ENST00000216211 MROH6A6NGR9 719 aa14.51□□□□□ -0.09
UPK3A-201ENST00000216211 LIN7AO14910 233 aaPredicted RBP14.51□□□□□ -0.09
UPK3A-201ENST00000216211 MAP3K7O43318 606 aa14.51□□□□□ -0.09
UPK3A-201ENST00000216211 GSTM1P09488 218 aa14.51□□□□□ -0.09
UPK3A-201ENST00000216211 MSL3P1P0C860 447 aa14.51□□□□□ -0.09
UPK3A-201ENST00000216211 FOXN2P32314 431 aa14.51□□□□□ -0.09
UPK3A-201ENST00000216211 NSG1P42857 185 aa14.51□□□□□ -0.09
UPK3A-201ENST00000216211 CD97P48960 835 aa14.51□□□□□ -0.09
UPK3A-201ENST00000216211 PGDP52209 483 aa14.51□□□□□ -0.09
UPK3A-201ENST00000216211 ITGA1P56199 1179 aa14.51□□□□□ -0.09
UPK3A-201ENST00000216211 GSTM4Q03013 218 aa14.51□□□□□ -0.09
UPK3A-201ENST00000216211 ITIH4Q14624 930 aa14.51□□□□□ -0.09
UPK3A-201ENST00000216211 NADK2Q4G0N4 442 aa14.51□□□□□ -0.09
UPK3A-201ENST00000216211 SPESP1Q6UW49 350 aa14.51□□□□□ -0.09
UPK3A-201ENST00000216211 FAM198BQ6UWH4 519 aa14.51□□□□□ -0.09
UPK3A-201ENST00000216211 CLEC18BQ6UXF7 455 aa14.51□□□□□ -0.09
UPK3A-201ENST00000216211 TRIM73Q86UV7 250 aa14.51□□□□□ -0.09
UPK3A-201ENST00000216211 ATCAYQ86WG3 371 aa14.51□□□□□ -0.09
UPK3A-201ENST00000216211 CLEC18CQ8NCF0 446 aa14.51□□□□□ -0.09
UPK3A-201ENST00000216211 MNS1Q8NEH6 495 aa14.51□□□□□ -0.09
UPK3A-201ENST00000216211 ATG4AQ8WYN0 398 aa14.51□□□□□ -0.09
UPK3A-201ENST00000216211 SNX12Q9UMY4 172 aa14.51□□□□□ -0.09
UPK3A-201ENST00000216211 ASF1AQ9Y294 204 aa14.51□□□□□ -0.09
UPK3A-201ENST00000216211 TDRKHQ9Y2W6 561 aaKnown RBP14.51□□□□□ -0.09
UPK3A-201ENST00000216211 LRRK2Q5S007 2527 aa14.51□□□□□ -0.09
UPK3A-201ENST00000216211 NUP210LQ5VU65 1888 aa14.5□□□□□ -0.09
UPK3A-201ENST00000216211 SHANK1Q9Y566 2161 aa14.5□□□□□ -0.09
UPK3A-201ENST00000216211 CCDC162PA2VCL2 907 aa14.5□□□□□ -0.09
UPK3A-201ENST00000216211 EFCAB8A8MWE9 144 aa14.5□□□□□ -0.09
UPK3A-201ENST00000216211 E7EQ34 232 aa14.5□□□□□ -0.09
UPK3A-201ENST00000216211 ZNF749O43361 778 aa14.5□□□□□ -0.09
UPK3A-201ENST00000216211 TMEM63AO94886 807 aa14.5□□□□□ -0.09
UPK3A-201ENST00000216211 FTH1P02794 183 aa14.5□□□□□ -0.09
UPK3A-201ENST00000216211 UGT2B7P16662 529 aa14.5□□□□□ -0.09
UPK3A-201ENST00000216211 TCP1P17987 556 aaKnown RBP14.5□□□□□ -0.09
UPK3A-201ENST00000216211 PSMA3P25788 255 aa14.5□□□□□ -0.09
UPK3A-201ENST00000216211 ACADLP28330 430 aa14.5□□□□□ -0.09
UPK3A-201ENST00000216211 CDH17Q12864 832 aa14.5□□□□□ -0.09
UPK3A-201ENST00000216211 DEFB110Q30KQ9 67 aa14.5□□□□□ -0.09
UPK3A-201ENST00000216211 MEI1Q5TIA1 1274 aa14.5□□□□□ -0.09
UPK3A-201ENST00000216211 PACS1Q6VY07 963 aa14.5□□□□□ -0.09
UPK3A-201ENST00000216211 UNC5AQ6ZN44 842 aa14.5□□□□□ -0.09
UPK3A-201ENST00000216211 LINC00523Q86TU6 105 aa14.5□□□□□ -0.09
UPK3A-201ENST00000216211 HOOK3Q86VS8 718 aa14.5□□□□□ -0.09
UPK3A-201ENST00000216211 C19orf47Q8N9M1 422 aaKnown RBP14.5□□□□□ -0.09
UPK3A-201ENST00000216211 DNAAF3Q8N9W5 541 aa14.5□□□□□ -0.09
UPK3A-201ENST00000216211 OR13J1Q8NGT2 312 aa14.5□□□□□ -0.09
UPK3A-201ENST00000216211 UBE2Q2Q8WVN8 375 aa14.5□□□□□ -0.09
UPK3A-201ENST00000216211 HES6Q96HZ4 224 aa14.5□□□□□ -0.09
UPK3A-201ENST00000216211 OR2A14Q96R47 310 aa14.5□□□□□ -0.09
UPK3A-201ENST00000216211 FAM60AQ9NP50 221 aa14.5□□□□□ -0.09
UPK3A-201ENST00000216211 MLXIPLQ9NP71 852 aa14.5□□□□□ -0.09
UPK3A-201ENST00000216211 SPHK1Q9NYA1 384 aa14.5□□□□□ -0.09
UPK3A-201ENST00000216211 SLC2A6Q9UGQ3 507 aa14.5□□□□□ -0.09
UPK3A-201ENST00000216211 PLAGL1Q9UM63 463 aa14.5□□□□□ -0.09
UPK3A-201ENST00000216211 PCDHGA9Q9Y5G4 932 aaKnown RBP14.5□□□□□ -0.09
UPK3A-201ENST00000216211 SLC5A10A0PJK1 596 aa14.49□□□□□ -0.09
UPK3A-201ENST00000216211 TTLL8A6PVC2 850 aa14.49□□□□□ -0.09
UPK3A-201ENST00000216211 QSOX1O00391 747 aa14.49□□□□□ -0.09
UPK3A-201ENST00000216211 ZNF185O15231 689 aa14.49□□□□□ -0.09
UPK3A-201ENST00000216211 HCRTR1O43613 425 aa14.49□□□□□ -0.09
UPK3A-201ENST00000216211 OR1I1O60431 355 aa14.49□□□□□ -0.09
UPK3A-201ENST00000216211 CHRM5P08912 532 aaPredicted RBP14.49□□□□□ -0.09
UPK3A-201ENST00000216211 OR56A5P0C7T3 313 aa14.49□□□□□ -0.09
UPK3A-201ENST00000216211 TPBGLP0DKB5 382 aa14.49□□□□□ -0.09
UPK3A-201ENST00000216211 ATXN8OSP0DMR3 200 aa14.49□□□□□ -0.09
UPK3A-201ENST00000216211 SHMT2P34897 504 aa14.49□□□□□ -0.09
UPK3A-201ENST00000216211 CSE1LP55060 971 aaKnown RBP14.49□□□□□ -0.09
UPK3A-201ENST00000216211 NCF4Q15080 339 aa14.49□□□□□ -0.09
UPK3A-201ENST00000216211 ZIC1Q15915 447 aa14.49□□□□□ -0.09
UPK3A-201ENST00000216211 SYTL3Q4VX76 610 aa14.49□□□□□ -0.09
UPK3A-201ENST00000216211 ZNF385CQ66K41 422 aaPredicted RBP14.49□□□□□ -0.09
UPK3A-201ENST00000216211 TBC1D21Q8IYX1 336 aa14.49□□□□□ -0.09
UPK3A-201ENST00000216211 GPR135Q8IZ08 494 aa14.49□□□□□ -0.09
UPK3A-201ENST00000216211 FAM26EQ8N5C1 309 aa14.49□□□□□ -0.09
UPK3A-201ENST00000216211 ZBTB2Q8N680 514 aa14.49□□□□□ -0.09
UPK3A-201ENST00000216211 LRRN4CLQ8ND94 238 aa14.49□□□□□ -0.09
UPK3A-201ENST00000216211 N4BP2L2Q92802 583 aaPredicted RBP14.49□□□□□ -0.09
UPK3A-201ENST00000216211 HDAC10Q969S8 669 aa14.49□□□□□ -0.09
UPK3A-201ENST00000216211 ETNK1Q9HBU6 452 aa14.49□□□□□ -0.09
UPK3A-201ENST00000216211 ANKRD12Q6UB98 2062 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms