RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 TIFABQ6ZNK6 161 aa19.65■□□□□ 0.74
RHBDD3-201ENST00000216085 ADAMTSL2Q86TH1 951 aa19.65■□□□□ 0.74
RHBDD3-201ENST00000216085 MCOLN3Q8TDD5 553 aa19.65■□□□□ 0.74
RHBDD3-201ENST00000216085 LCN9Q8WX39 176 aa19.65■□□□□ 0.74
RHBDD3-201ENST00000216085 HIST1H2AHQ96KK5 128 aa19.65■□□□□ 0.74
RHBDD3-201ENST00000216085 HIST1H2AJQ99878 128 aa19.65■□□□□ 0.74
RHBDD3-201ENST00000216085 H2AFJQ9BTM1 129 aa19.65■□□□□ 0.74
RHBDD3-201ENST00000216085 NMRAL1Q9HBL8 299 aa19.65■□□□□ 0.74
RHBDD3-201ENST00000216085 CTNNAL1Q9UBT7 734 aa19.65■□□□□ 0.74
RHBDD3-201ENST00000216085 BTN3A1O00481 513 aa19.64■□□□□ 0.73
RHBDD3-201ENST00000216085 DUX1O43812 170 aa19.64■□□□□ 0.73
RHBDD3-201ENST00000216085 MT-ND3P03897 115 aa19.64■□□□□ 0.73
RHBDD3-201ENST00000216085 ENO2P09104 434 aaPredicted RBP19.64■□□□□ 0.73
RHBDD3-201ENST00000216085 LTA4HP09960 611 aaKnown RBP19.64■□□□□ 0.73
RHBDD3-201ENST00000216085 H2AFXP16104 143 aaPredicted RBP19.64■□□□□ 0.73
RHBDD3-201ENST00000216085 SHMT2P34897 504 aa19.64■□□□□ 0.73
RHBDD3-201ENST00000216085 KPNA2P52292 529 aaKnown RBP19.64■□□□□ 0.73
RHBDD3-201ENST00000216085 PGGT1BP53609 377 aa19.64■□□□□ 0.73
RHBDD3-201ENST00000216085 E2F1Q01094 437 aa19.64■□□□□ 0.73
RHBDD3-201ENST00000216085 CSHL1Q14406 222 aa19.64■□□□□ 0.73
RHBDD3-201ENST00000216085 TMEM207Q6UWW9 146 aa19.64■□□□□ 0.73
RHBDD3-201ENST00000216085 CYHR1Q6ZMK1 362 aa19.64■□□□□ 0.73
RHBDD3-201ENST00000216085 FRA10AC1Q70Z53 315 aa19.64■□□□□ 0.73
RHBDD3-201ENST00000216085 SPRED1Q7Z699 444 aa19.64■□□□□ 0.73
RHBDD3-201ENST00000216085 Q8N9G6 341 aaPredicted RBP19.64■□□□□ 0.73
RHBDD3-201ENST00000216085 FBXO15Q8NCQ5 510 aaPredicted RBP19.64■□□□□ 0.73
RHBDD3-201ENST00000216085 OR52E1Q8NGJ3 308 aa19.64■□□□□ 0.73
RHBDD3-201ENST00000216085 ACMSDQ8TDX5 336 aa19.64■□□□□ 0.73
RHBDD3-201ENST00000216085 TFB2MQ9H5Q4 396 aaKnown RBP19.64■□□□□ 0.73
RHBDD3-201ENST00000216085 FAM221BA6H8Z2 402 aa19.63■□□□□ 0.73
RHBDD3-201ENST00000216085 GFYI3L273 518 aa19.63■□□□□ 0.73
RHBDD3-201ENST00000216085 UBXN7O94888 489 aa19.63■□□□□ 0.73
RHBDD3-201ENST00000216085 WISP3O95389 354 aaPredicted RBP19.63■□□□□ 0.73
RHBDD3-201ENST00000216085 MAGEA12P43365 314 aa19.63■□□□□ 0.73
RHBDD3-201ENST00000216085 BDKRB1P46663 353 aa19.63■□□□□ 0.73
RHBDD3-201ENST00000216085 SIM1P81133 766 aaPredicted RBP19.63■□□□□ 0.73
RHBDD3-201ENST00000216085 CCDC157Q569K6 752 aa19.63■□□□□ 0.73
RHBDD3-201ENST00000216085 PERM1Q5SV97 790 aa19.63■□□□□ 0.73
RHBDD3-201ENST00000216085 ZNF761Q86XN6 746 aaPredicted RBP19.63■□□□□ 0.73
RHBDD3-201ENST00000216085 ANKRD49Q8WVL7 239 aa19.63■□□□□ 0.73
RHBDD3-201ENST00000216085 UBXN10Q96LJ8 280 aa19.63■□□□□ 0.73
RHBDD3-201ENST00000216085 SRMSQ9H3Y6 488 aa19.63■□□□□ 0.73
RHBDD3-201ENST00000216085 SYNDIG1Q9H7V2 258 aa19.63■□□□□ 0.73
RHBDD3-201ENST00000216085 PARVBQ9HBI1 364 aa19.63■□□□□ 0.73
RHBDD3-201ENST00000216085 LNPEPQ9UIQ6 1025 aa19.63■□□□□ 0.73
RHBDD3-201ENST00000216085 CCDC189A1A4V9 331 aa19.62■□□□□ 0.73
RHBDD3-201ENST00000216085 GOLGA6L10A6NI86 522 aa19.62■□□□□ 0.73
RHBDD3-201ENST00000216085 ZNF839A8K0R7 811 aa19.62■□□□□ 0.73
RHBDD3-201ENST00000216085 ARHGEF33A8MVX0 844 aa19.62■□□□□ 0.73
RHBDD3-201ENST00000216085 SYF2O95926 243 aaKnown RBP19.62■□□□□ 0.73
RHBDD3-201ENST00000216085 COL6A2P12110 1019 aa19.62■□□□□ 0.73
RHBDD3-201ENST00000216085 AMD1P17707 334 aa19.62■□□□□ 0.73
RHBDD3-201ENST00000216085 HSD17B2P37059 387 aa19.62■□□□□ 0.73
RHBDD3-201ENST00000216085 PRKAA1Q13131 559 aa19.62■□□□□ 0.73
RHBDD3-201ENST00000216085 CASP8Q14790 479 aa19.62■□□□□ 0.73
RHBDD3-201ENST00000216085 CLPPQ16740 277 aaPredicted RBP19.62■□□□□ 0.73
RHBDD3-201ENST00000216085 TSNAXIP1Q2TAA8 658 aa19.62■□□□□ 0.73
RHBDD3-201ENST00000216085 FBXO38Q6PIJ6 1188 aa19.62■□□□□ 0.73
RHBDD3-201ENST00000216085 OOSP2Q86WS3 158 aa19.62■□□□□ 0.73
RHBDD3-201ENST00000216085 IQCKQ8N0W5 287 aa19.62■□□□□ 0.73
RHBDD3-201ENST00000216085 ZIM3Q96PE6 472 aa19.62■□□□□ 0.73
RHBDD3-201ENST00000216085 SLC12A9Q9BXP2 914 aa19.62■□□□□ 0.73
RHBDD3-201ENST00000216085 LGALS13Q9UHV8 139 aa19.62■□□□□ 0.73
RHBDD3-201ENST00000216085 NOVA2Q9UNW9 492 aaKnown RBP19.62■□□□□ 0.73
RHBDD3-201ENST00000216085 CFAP54Q96N23 3096 aa19.62■□□□□ 0.73
RHBDD3-201ENST00000216085 RAB28P51157 221 aa19.62■□□□□ 0.73
RHBDD3-201ENST00000216085 AP1S2P56377 157 aa19.62■□□□□ 0.73
RHBDD3-201ENST00000216085 ZNF844Q08AG5 666 aa19.62■□□□□ 0.73
RHBDD3-201ENST00000216085 CEP85LQ5SZL2 805 aa19.62■□□□□ 0.73
RHBDD3-201ENST00000216085 ARMC6Q6NXE6 501 aa19.62■□□□□ 0.73
RHBDD3-201ENST00000216085 LCA5Q86VQ0 697 aa19.62■□□□□ 0.73
RHBDD3-201ENST00000216085 DPYSL5Q9BPU6 564 aa19.62■□□□□ 0.73
RHBDD3-201ENST00000216085 TBC1D10AQ9BXI6 508 aa19.62■□□□□ 0.73
RHBDD3-201ENST00000216085 PCMTD2Q9NV79 361 aa19.62■□□□□ 0.73
RHBDD3-201ENST00000216085 EURLQ9NYK6 297 aa19.62■□□□□ 0.73
RHBDD3-201ENST00000216085 SPATA7Q9P0W8 599 aa19.62■□□□□ 0.73
RHBDD3-201ENST00000216085 IGHV1OR21-1A0A087WYE8 117 aa19.61■□□□□ 0.73
RHBDD3-201ENST00000216085 PRAMEF33A0A0G2JMD5 474 aa19.61■□□□□ 0.73
RHBDD3-201ENST00000216085 NPEPPSL1A6NEC2 478 aa19.61■□□□□ 0.73
RHBDD3-201ENST00000216085 MATN2O00339 956 aa19.61■□□□□ 0.73
RHBDD3-201ENST00000216085 KLHL2O95198 593 aa19.61■□□□□ 0.73
RHBDD3-201ENST00000216085 KCNK5O95279 499 aa19.61■□□□□ 0.73
RHBDD3-201ENST00000216085 RPLP0P05388 317 aaKnown RBP19.61■□□□□ 0.73
RHBDD3-201ENST00000216085 PROS1P07225 676 aa19.61■□□□□ 0.73
RHBDD3-201ENST00000216085 CD1DP15813 335 aa19.61■□□□□ 0.73
RHBDD3-201ENST00000216085 CSRP3P50461 194 aa19.61■□□□□ 0.73
RHBDD3-201ENST00000216085 OR1D5P58170 312 aa19.61■□□□□ 0.73
RHBDD3-201ENST00000216085 AMZ1Q400G9 498 aa19.61■□□□□ 0.73
RHBDD3-201ENST00000216085 HDXQ7Z353 690 aa19.61■□□□□ 0.73
RHBDD3-201ENST00000216085 AMIGO1Q86WK6 493 aa19.61■□□□□ 0.73
RHBDD3-201ENST00000216085 OR9A1PQ8NGU1 263 aa19.61■□□□□ 0.73
RHBDD3-201ENST00000216085 LRRN3Q9H3W5 708 aa19.61■□□□□ 0.73
RHBDD3-201ENST00000216085 OR6C2Q9NZP2 312 aa19.61■□□□□ 0.73
RHBDD3-201ENST00000216085 SPAARA0A1B0GVQ0 90 aa19.6■□□□□ 0.73
RHBDD3-201ENST00000216085 MYO1CO00159 1063 aa19.6■□□□□ 0.73
RHBDD3-201ENST00000216085 RGS16O15492 202 aaPredicted RBP19.6■□□□□ 0.73
RHBDD3-201ENST00000216085 RFPL1O75677 317 aa19.6■□□□□ 0.73
RHBDD3-201ENST00000216085 FTH1P19P0C7X4 201 aa19.6■□□□□ 0.73
RHBDD3-201ENST00000216085 MYZAPP0CAP1 466 aa19.6■□□□□ 0.73
RHBDD3-201ENST00000216085 KCNA4P22459 653 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms