RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 RB1P06400 928 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 ASGR1P07306 291 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 PVALBP20472 110 aaPredicted RBP10.27□□□□□ -0.77
VCL-201ENST00000211998 CCR4P51679 360 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 IRF9Q00978 393 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 LAPTM5Q13571 262 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 ZNHIT3Q15649 155 aaPredicted RBP10.27□□□□□ -0.77
VCL-201ENST00000211998 EPGNQ6UW88 154 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 CXCL17Q6UXB2 119 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 GPR142Q7Z601 462 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 PIGZQ86VD9 579 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 CMTR2Q8IYT2 770 aaKnown RBP10.27□□□□□ -0.77
VCL-201ENST00000211998 GALNT11Q8NCW6 608 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 IL1RAPQ9NPH3 570 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 ACTR3BQ9P1U1 418 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 CLCA3PQ9Y6N3 262 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 C9IYK1 514 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 TMEM63AO94886 807 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 FGF19O95750 216 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 CD48P09326 243 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 CHRNB1P11230 501 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 MYCLP1P12525 358 aaPredicted RBP10.27□□□□□ -0.77
VCL-201ENST00000211998 HDCP19113 662 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 PTX3P26022 381 aaPredicted RBP10.27□□□□□ -0.77
VCL-201ENST00000211998 GJA9P57773 515 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 RHEBQ15382 184 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 MARCH9Q86YJ5 346 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 MAELQ96JY0 434 aaKnown RBP10.27□□□□□ -0.77
VCL-201ENST00000211998 USP29Q9HBJ7 922 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 SERPINA3P01011 423 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 THEGLP0DJG4 465 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 CPN2P22792 545 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 MAP2K4P45985 399 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 KCNJ8Q15842 424 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 FIBCD1Q8N539 461 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 C11orf65Q8NCR3 313 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 OR7G1Q8NGA0 311 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 PPP1R13LQ8WUF5 828 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 FAM105AQ9NUU6 356 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 SEC14L3Q9UDX4 400 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 FAM189A1O60320 539 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 CHRNA1P02708 482 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 DNAJA1P31689 397 aaKnown RBP10.26□□□□□ -0.77
VCL-201ENST00000211998 SP3Q02447 781 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 GBE1Q04446 702 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 RIPPLY1Q0D2K3 151 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 BRMS1LQ5PSV4 323 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 FAM46CQ5VWP2 391 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 TAPT1Q6NXT6 567 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 ARMC10Q8N2F6 343 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 SLCO2A1Q92959 643 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 TCEAL4Q96EI5 215 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 SCRN2Q96FV2 425 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 COL21A1Q96P44 957 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 ADAMTS10Q9H324 1103 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 SOX17Q9H6I2 414 aaPredicted RBP10.26□□□□□ -0.77
VCL-201ENST00000211998 OXSMQ9NWU1 459 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 MGAT4AQ9UM21 535 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 ROBO3Q96MS0 1386 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 A0A075B6Q4 140 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 URADA6NGE7 173 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 LRCH4O75427 683 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 RNASEH2AO75792 299 aaKnown RBP10.26□□□□□ -0.77
VCL-201ENST00000211998 GADD45GO95257 159 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 SNAP29O95721 258 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 NUDT14O95848 222 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 HIST1H2ABP04908 130 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 ANXA3P12429 323 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 PPP5CP53041 499 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 PMS2P3Q13401 168 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 ZBTB6Q15916 424 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 ZACNQ401N2 412 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 HIST3H2AQ7L7L0 130 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 SLC15A3Q8IY34 581 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 LIX1Q8N485 282 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 C7orf57Q8NEG2 295 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 SLC13A3Q8WWT9 602 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 SLC9A6Q92581 669 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 HIST1H2ACQ93077 130 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 MKRN2Q9H000 416 aaKnown RBP10.26□□□□□ -0.77
VCL-201ENST00000211998 IGFLR1Q9H665 355 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 TMEM131LA2VDJ0 1609 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 LOC100509620A0A075B734 347 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 FAM234BA2RU67 622 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 CPSF4LA6NMK7 179 aaKnown RBP10.26□□□□□ -0.77
VCL-201ENST00000211998 NT5C1B-RDH14C9J2C7 533 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 SNAPC5O75971 98 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 LYPLA2O95372 231 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 GSK3BP49841 420 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 MAXP61244 160 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 MOB2Q70IA6 237 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 GALNTL5Q7Z4T8 443 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 SNX20Q7Z614 316 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 IGFN1Q86VF2 1251 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 CPNE8Q86YQ8 564 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 PLCZ1Q86YW0 608 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 COLGALT2Q8IYK4 626 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 SNX33Q8WV41 574 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 COL26A1Q96A83 441 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 ZNF641Q96N77 438 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms