RNA–Protein interactions for RNA: ENST00000173898.11

TRO-201, Transcript of trophinin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRO, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-201ENST00000173898 C8orf48Q96LL4 319 aa11.8□□□□□ -0.52
TRO-201ENST00000173898 KAT8Q9H7Z6 458 aaKnown RBP11.8□□□□□ -0.52
TRO-201ENST00000173898 COMMD9Q9P000 198 aa11.8□□□□□ -0.52
TRO-201ENST00000173898 IRAK3Q9Y616 596 aa11.8□□□□□ -0.52
TRO-201ENST00000173898 GPC6Q9Y625 555 aaPredicted RBP11.8□□□□□ -0.52
TRO-201ENST00000173898 MYO9BQ13459 2157 aa11.8□□□□□ -0.52
TRO-201ENST00000173898 ANKRD66B4E2M5 251 aa11.8□□□□□ -0.52
TRO-201ENST00000173898 CA12O43570 354 aa11.8□□□□□ -0.52
TRO-201ENST00000173898 CCNKO75909 580 aa11.8□□□□□ -0.52
TRO-201ENST00000173898 ECDO95905 644 aaPredicted RBP11.8□□□□□ -0.52
TRO-201ENST00000173898 INHAP05111 366 aa11.8□□□□□ -0.52
TRO-201ENST00000173898 DLDP09622 509 aaKnown RBP11.8□□□□□ -0.52
TRO-201ENST00000173898 PRPS1L1P21108 318 aa11.8□□□□□ -0.52
TRO-201ENST00000173898 GSK3BP49841 420 aa11.8□□□□□ -0.52
TRO-201ENST00000173898 CNPY1Q3B7I2 92 aa11.8□□□□□ -0.52
TRO-201ENST00000173898 SNAP47Q5SQN1 464 aa11.8□□□□□ -0.52
TRO-201ENST00000173898 TXNDC8Q6A555 127 aa11.8□□□□□ -0.52
TRO-201ENST00000173898 POMZP3Q6PJE2 187 aa11.8□□□□□ -0.52
TRO-201ENST00000173898 RPTNQ6XPR3 784 aa11.8□□□□□ -0.52
TRO-201ENST00000173898 BEND5Q7L4P6 421 aa11.8□□□□□ -0.52
TRO-201ENST00000173898 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.8□□□□□ -0.52
TRO-201ENST00000173898 CADM2Q8N3J6 435 aa11.8□□□□□ -0.52
TRO-201ENST00000173898 PDPRQ8NCN5 879 aa11.8□□□□□ -0.52
TRO-201ENST00000173898 OR5K1Q8NHB7 308 aa11.8□□□□□ -0.52
TRO-201ENST00000173898 RNASE11Q8TAA1 199 aaKnown RBP11.8□□□□□ -0.52
TRO-201ENST00000173898 NPLOC4Q8TAT6 608 aa11.8□□□□□ -0.52
TRO-201ENST00000173898 SH3RF2Q8TEC5 729 aa11.8□□□□□ -0.52
TRO-201ENST00000173898 RAB2BQ8WUD1 216 aa11.8□□□□□ -0.52
TRO-201ENST00000173898 SLC28A3Q9HAS3 691 aa11.8□□□□□ -0.52
TRO-201ENST00000173898 FNIP2Q9P278 1114 aa11.8□□□□□ -0.52
TRO-201ENST00000173898 COLEC10Q9Y6Z7 277 aa11.8□□□□□ -0.52
TRO-201ENST00000173898 IQCMA0A1B0GVH7 501 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 SAP18O00422 153 aaKnown RBP11.79□□□□□ -0.52
TRO-201ENST00000173898 KHDRBS3O75525 346 aaKnown RBP11.79□□□□□ -0.52
TRO-201ENST00000173898 PRKD3O94806 890 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 PGLSO95336 258 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 CMPK1P30085 196 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 PRR5P85299 388 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 CHRNA6Q15825 494 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 GPR88Q9GZN0 384 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 ING3Q9NXR8 418 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 YIPF1Q9Y548 306 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 CPSF4LA6NMK7 179 aaKnown RBP11.79□□□□□ -0.52
TRO-201ENST00000173898 PCDH7O60245 1069 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 DHFRP00374 187 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 F2P00734 622 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 ILF3Q12906 894 aaKnown RBP eCLIP11.79□□□□□ -0.52
TRO-201ENST00000173898 CRHR2Q13324 411 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 IL18Q14116 193 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 CXorf57Q6NSI4 855 aaKnown RBP11.79□□□□□ -0.52
TRO-201ENST00000173898 PLD6Q8N2A8 252 aaKnown RBP11.79□□□□□ -0.52
TRO-201ENST00000173898 FLCNQ8NFG4 579 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 DNAJB8Q8NHS0 232 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 FAM110BQ8TC76 370 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 LMLNQ96KR4 655 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 CAPNS2Q96L46 248 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 ZNF354BQ96LW1 612 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 GMLQ99445 158 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 PKP2Q99959 881 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 C1orf21Q9H246 121 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 CRTAC1Q9NQ79 661 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 VPS29Q9UBQ0 182 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 ZNF282Q9UDV7 671 aaPredicted RBP11.79□□□□□ -0.52
TRO-201ENST00000173898 TMA7Q9Y2S6 64 aaKnown RBP11.79□□□□□ -0.52
TRO-201ENST00000173898 CLIC1O00299 241 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 MATN2O00339 956 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 CNTN5O94779 1100 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 SNX4O95219 450 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 RASGRP1O95267 797 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 SLC35G6P0C7Q6 338 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 MAT2AP31153 395 aaKnown RBP11.79□□□□□ -0.52
TRO-201ENST00000173898 GDF5P43026 501 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 CDH15P55291 814 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 OAFQ86UD1 273 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 PCYT2Q99447 389 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 ZBTB26Q9HCK0 441 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 C11orf16Q9NQ32 467 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 RPRD1BQ9NQG5 326 aaKnown RBP11.79□□□□□ -0.52
TRO-201ENST00000173898 ZDHHC3Q9NYG2 299 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 SIRPGQ9P1W8 387 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 SIGLEC1Q9BZZ2 1709 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 KCPQ6ZWJ8 1503 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 A0A0G2JN53 185 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 CHST10O43529 356 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 MPZL2O60487 215 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 RFPL1O75677 317 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 VARSP26640 1264 aaKnown RBP11.79□□□□□ -0.52
TRO-201ENST00000173898 RPS6KA3P51812 740 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 CARD16Q5EG05 197 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 ATAT1Q5SQI0 421 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 TPGS2Q68CL5 300 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 USP30Q70CQ3 517 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 GALNT15Q8N3T1 639 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 TP53INP1Q96A56 240 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 ZBED6CLQ96FA7 236 aaPredicted RBP11.79□□□□□ -0.52
TRO-201ENST00000173898 PDCD10Q9BUL8 212 aa11.79□□□□□ -0.52
TRO-201ENST00000173898 FBRSL1Q9HCM7 1045 aaKnown RBP11.79□□□□□ -0.52
TRO-201ENST00000173898 DLG5Q8TDM6 1919 aa11.78□□□□□ -0.52
TRO-201ENST00000173898 A0A1W2PRB8 838 aa11.78□□□□□ -0.52
TRO-201ENST00000173898 SAGE2PA6NJ88 616 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms