RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Magee2Q52KG3 523 aa17.96■□□□□ 0.47
Trim47-202ENSMUST00000106441 RimklaQ6PFX8 380 aa17.96■□□□□ 0.47
Trim47-202ENSMUST00000106441 Vrk2Q8BN21 503 aaKnown RBP17.96■□□□□ 0.47
Trim47-202ENSMUST00000106441 Ccdc92Q8VDN4 314 aa17.96■□□□□ 0.47
Trim47-202ENSMUST00000106441 Slc44a3Q921V7 656 aa17.96■□□□□ 0.47
Trim47-202ENSMUST00000106441 Pycr2Q922Q4 320 aaKnown RBP17.96■□□□□ 0.47
Trim47-202ENSMUST00000106441 Mrpl1Q99N96 336 aaKnown RBP17.96■□□□□ 0.47
Trim47-202ENSMUST00000106441 Q9CXL3 195 aa17.96■□□□□ 0.47
Trim47-202ENSMUST00000106441 Sesn3Q9CYP7 492 aa17.96■□□□□ 0.47
Trim47-202ENSMUST00000106441 Hipk3Q9ERH7 1192 aa17.96■□□□□ 0.47
Trim47-202ENSMUST00000106441 Wdr12Q9JJA4 423 aa17.96■□□□□ 0.47
Trim47-202ENSMUST00000106441 Scube2Q9JJS0 997 aa17.96■□□□□ 0.47
Trim47-202ENSMUST00000106441 Nectin1Q9JKF6 515 aa17.96■□□□□ 0.47
Trim47-202ENSMUST00000106441 Prokr1Q9JKL1 393 aa17.96■□□□□ 0.47
Trim47-202ENSMUST00000106441 Epb41l4bQ9JMC8 527 aa17.96■□□□□ 0.47
Trim47-202ENSMUST00000106441 Itga8A2ARA8 1062 aa17.96■□□□□ 0.46
Trim47-202ENSMUST00000106441 Matn4O89029 624 aa17.96■□□□□ 0.46
Trim47-202ENSMUST00000106441 mt-Co3P00416 261 aa17.96■□□□□ 0.46
Trim47-202ENSMUST00000106441 Tap1P21958 724 aa17.96■□□□□ 0.46
Trim47-202ENSMUST00000106441 Uba1Q02053 1058 aaKnown RBP17.96■□□□□ 0.46
Trim47-202ENSMUST00000106441 Tmem173Q3TBT3 378 aa17.96■□□□□ 0.46
Trim47-202ENSMUST00000106441 Tmem184cQ3TPR7 525 aa17.96■□□□□ 0.46
Trim47-202ENSMUST00000106441 CenplQ3U3S3 329 aa17.96■□□□□ 0.46
Trim47-202ENSMUST00000106441 Ceacam5Q3UKK2 947 aa17.96■□□□□ 0.46
Trim47-202ENSMUST00000106441 Trim40Q3UWA4 246 aa17.96■□□□□ 0.46
Trim47-202ENSMUST00000106441 Zbtb2Q3V3W4 514 aaKnown RBP17.96■□□□□ 0.46
Trim47-202ENSMUST00000106441 Fam189bQ5HZJ5 669 aa17.96■□□□□ 0.46
Trim47-202ENSMUST00000106441 FaddQ61160 205 aa17.96■□□□□ 0.46
Trim47-202ENSMUST00000106441 Rxfp4Q7TQP4 414 aa17.96■□□□□ 0.46
Trim47-202ENSMUST00000106441 DdnQ80TS7 710 aa17.96■□□□□ 0.46
Trim47-202ENSMUST00000106441 Tmcc2Q80W04 706 aa17.96■□□□□ 0.46
Trim47-202ENSMUST00000106441 Krr1Q8BGA5 380 aaKnown RBP17.96■□□□□ 0.46
Trim47-202ENSMUST00000106441 Gpr61Q8C010 449 aa17.96■□□□□ 0.46
Trim47-202ENSMUST00000106441 Samd7Q8C8Y5 445 aa17.96■□□□□ 0.46
Trim47-202ENSMUST00000106441 Nxnl1Q8VC33 217 aa17.96■□□□□ 0.46
Trim47-202ENSMUST00000106441 Slc22a7Q91WU2 540 aa17.96■□□□□ 0.46
Trim47-202ENSMUST00000106441 Sfxn1Q99JR1 322 aa17.96■□□□□ 0.46
Trim47-202ENSMUST00000106441 Cmc1Q9CPZ8 106 aa17.96■□□□□ 0.46
Trim47-202ENSMUST00000106441 Ndufb5Q9CQH3 189 aa17.96■□□□□ 0.46
Trim47-202ENSMUST00000106441 Shmt2Q9CZN7 504 aaKnown RBP17.96■□□□□ 0.46
Trim47-202ENSMUST00000106441 Ccdc70Q9D9B0 223 aa17.96■□□□□ 0.46
Trim47-202ENSMUST00000106441 Ect2lA0A140LIP2 953 aa17.95■□□□□ 0.46
Trim47-202ENSMUST00000106441 Gm7073E9QAS1 335 aa17.95■□□□□ 0.46
Trim47-202ENSMUST00000106441 Vmn2r10K7N621 847 aa17.95■□□□□ 0.46
Trim47-202ENSMUST00000106441 Ccdc153P0C7Q1 202 aa17.95■□□□□ 0.46
Trim47-202ENSMUST00000106441 F2P19221 618 aa17.95■□□□□ 0.46
Trim47-202ENSMUST00000106441 Galnt3P70419 633 aa17.95■□□□□ 0.46
Trim47-202ENSMUST00000106441 Pfdn6Q03958 127 aa17.95■□□□□ 0.46
Trim47-202ENSMUST00000106441 Adam2Q60718 735 aa17.95■□□□□ 0.46
Trim47-202ENSMUST00000106441 Igfbp7Q61581 281 aa17.95■□□□□ 0.46
Trim47-202ENSMUST00000106441 Defa17Q64016 82 aa17.95■□□□□ 0.46
Trim47-202ENSMUST00000106441 SyncripQ7TMK9 623 aaKnown RBP17.95■□□□□ 0.46
Trim47-202ENSMUST00000106441 Nrn1lQ8C4W3 162 aa17.95■□□□□ 0.46
Trim47-202ENSMUST00000106441 Mta1Q8K4B0 715 aaKnown RBP17.95■□□□□ 0.46
Trim47-202ENSMUST00000106441 Olfr854Q8VFF1 315 aa17.95■□□□□ 0.46
Trim47-202ENSMUST00000106441 Nrif1Q923B3 828 aa17.95■□□□□ 0.46
Trim47-202ENSMUST00000106441 Dcdc2cQ9D1B8 347 aa17.95■□□□□ 0.46
Trim47-202ENSMUST00000106441 DnpepQ9Z2W0 473 aa17.95■□□□□ 0.46
Trim47-202ENSMUST00000106441 Scn8aQ9WTU3 1978 aa17.95■□□□□ 0.46
Trim47-202ENSMUST00000106441 Vsig10l2A0A140LHF2 776 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 Vmn2r38G3UYA8 861 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 Vmn2r33K7N705 861 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 NapsaO09043 419 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 Map2k3O09110 347 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 H2-M9O19442 342 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 Map3k7clP58500 142 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 Fpr-rs6Q3SXG2 339 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 Armc7Q3UJZ3 198 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 Znrf3Q5SSZ7 913 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 Kansl1Q80TG1 1036 aaKnown RBP17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 Hmgxb4Q80Y32 594 aaKnown RBP17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 Amigo1Q80ZD8 492 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 Gxylt2Q810K9 444 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 Ppp1r3eQ8BRJ4 279 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 Q8CC96 669 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 BroxQ8K2Q7 411 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 Tspan33Q8R3S2 283 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 SelenomQ8VHC3 145 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 Cldn19Q9ET38 224 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 CpqQ9WVJ3 470 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 Cdh23Q99PF4 3354 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 Gm10406A6NAS4 205 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 Gm3373A6NAS7 205 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 Gm3752A6NAT4 150 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 Gm3298E9PW80 205 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 Gm3667K7N757 205 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 Cyp4a14O35728 507 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 Ring1O35730 406 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 TyrP11344 533 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 Etv2P41163 335 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 Smpdl3aP70158 445 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 Akr1c6P70694 323 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 Cry1P97784 606 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 Itgb8Q0VBD0 767 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 Pnrc1Q3TWH3 297 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 MthfsdQ3URQ7 372 aaKnown RBP17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 Zmat1Q3V0C1 714 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 Hepacam2Q4VAH7 463 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 Gm3558Q5FWC9 205 aa17.94■□□□□ 0.46
Trim47-202ENSMUST00000106441 Rnf215Q5SPX3 379 aa17.94■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 25.1 ms