RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Vsx2Q61412 361 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Mvb12bQ6KAU4 317 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Q6P2K3 674 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Olfr664Q7TRP5 306 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Spata7Q80VP2 582 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 AftphQ80WT5 931 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Prpf18Q8BM39 342 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Map4k5Q8BPM2 847 aaKnown RBP9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Fastkd3Q8BSN9 661 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Lpcat2Q8BYI6 544 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Olfr1310Q8VF85 312 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Uts2rQ8VIH9 385 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Nudt17Q9CWD3 296 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Ints11Q9CWS4 600 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Atp6ap2Q9CYN9 350 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Q9CZV2 255 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Pkp3Q9QY23 797 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Umodl1Q5DID3 1319 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 A0A1L1ST33 502 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Smim17A0A504 109 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Vmn2r35E9Q7U8 861 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Fam181aJ3QNB7 292 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Vmn2r8L7N472 848 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 HunkO88866 714 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 LifP09056 203 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Ifngr1P15261 477 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Cxcl9P18340 126 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Cd247P24161 164 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Ccdc61Q3UJV1 511 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 GstcdQ5RL51 634 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Fam71bQ5STT6 665 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Cdkn2cQ60772 168 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Eif2b4Q61749 524 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Ppp1r14bQ62084 147 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Pik3r3Q64143 461 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Cpsf6Q6NVF9 551 aaKnown RBP9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Txndc15Q6P6J9 344 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Klhl42Q8BFQ9 493 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Vps4aQ8VEJ9 437 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 GlyatQ91XE0 296 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Lactb2Q99KR3 288 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Ergic3Q9CQE7 383 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Ly6kQ9CWP4 154 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 CacybpQ9CXW3 229 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Alg14Q9D081 217 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Spesp1Q9D5A0 399 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Gm4788E9Q8B5 879 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Oaz2O08608 189 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Orm2P07361 207 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 MaxP28574 160 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Kcnj2P35561 428 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Etv2P41163 335 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Kcnj9P48543 393 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 CartptP56388 129 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Map3k7clP58500 142 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Hdac2P70288 488 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Cry1P97784 606 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 MthfsdQ3URQ7 372 aaKnown RBP9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Naa11Q3UX61 218 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Hesx1Q61658 185 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Wnt8aQ64527 354 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Apex2Q68G58 516 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Znf366Q6NS86 746 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Inppl1Q6P549 1257 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Ppp2r2bQ6ZWR4 443 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Scn4bQ7M729 228 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Syt14Q7TN84 555 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Aoc2Q812C9 757 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Slc16a12Q8BGC3 486 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Tspan12Q8BKT6 305 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Fndc3aQ8BX90 1198 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Gykl1Q8C635 549 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Q8CC96 669 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Eif3lQ8QZY1 564 aaKnown RBP9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Ccdc59Q8R2N0 240 aaKnown RBP9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 EbplQ9D0P0 206 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Znrf4Q9DAH2 327 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Il1rl2Q9ERS7 574 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 C1qtnf3Q9ES30 246 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Olfr1006A2ALD2 312 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Vbp1P61759 196 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 SgcdP82347 289 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Pfdn6Q03958 127 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Cmpk2Q3U5Q7 447 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 HadhQ61425 314 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Paqr3Q6TCG8 311 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 B3galnt2Q8BG28 504 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Klhl26Q8BGY4 606 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Cyp20a1Q8BKE6 462 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Ttc24Q8BYG0 334 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Hmgcs1Q8JZK9 520 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Plac9Q8K262 108 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Armcx6Q8K3A6 301 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 CcsapQ8QZT2 252 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Nudt4Q8R2U6 179 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Ing3Q8VEK6 421 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Olfr691Q8VGW5 322 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Ptov1Q91VU8 416 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Fcf1Q9CTH6 198 aa9.6□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 2610042L04RikQ9D073 150 aa9.6□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 46 ms