RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Fndc3bQ6NWW9 1207 aaKnown RBP14.53□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Nudcd1Q6PIP5 582 aa14.53□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Polr2eQ80UW8 210 aaKnown RBP14.53□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Asrgl1Q8C0M9 326 aa14.53□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 4932411N23RikQ8C0S0 470 aa14.53□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Prkd3Q8K1Y2 889 aa14.53□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Lsm1Q8VC85 133 aa14.53□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Cyp2c50Q91X77 490 aa14.53□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 DarsQ922B2 501 aaKnown RBP14.53□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Taf1dQ9D4V4 322 aa14.53□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Fezf2Q9ESP5 455 aa14.53□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Pramef20B1ARV6 477 aa14.52□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Zcchc7B1AX39 541 aa14.52□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Zfp808B8JJZ4 753 aa14.52□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Olfr287E9PZS7 322 aa14.52□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Trdmt1O55055 415 aa14.52□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Rab12P35283 243 aa14.52□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Cyp2c38P56655 490 aa14.52□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Pcbp1P60335 356 aaKnown RBP14.52□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Sap25Q1EHW4 186 aa14.52□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Etaa1Q5SVT3 877 aa14.52□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Klra2Q60660 288 aa14.52□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Itga7Q61738 1179 aa14.52□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 St8sia4Q64692 359 aa14.52□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Olfr1128Q7TR47 311 aa14.52□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Zmpste24Q80W54 475 aa14.52□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Guf1Q8C3X4 651 aaKnown RBP14.52□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Appl1Q8K3H0 707 aa14.52□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Acsm1Q91VA0 573 aa14.52□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Cbr4Q91VT4 236 aa14.52□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Nipal2Q91WC7 383 aa14.52□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 GneQ91WG8 722 aaKnown RBP14.52□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Mto1Q923Z3 669 aa14.52□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Desi1Q9CQT7 168 aa14.52□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 GrifinQ9D1U0 144 aa14.52□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Clca3a1Q9QX15 902 aa14.52□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 PnckQ9QYK9 343 aa14.52□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Zbtb18Q9WUK6 522 aa14.52□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Olfr1303A2AVW1 312 aa14.52□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 4930558K02RikE0CXC6 182 aa14.52□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Kctd18E0CZ26 429 aa14.52□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Gm10324L7N208 604 aa14.52□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Hsd17b10O08756 261 aaKnown RBP14.52□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Anxa3O35639 323 aa14.52□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Bmp6P20722 510 aa14.52□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Gdf5P43027 495 aa14.52□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Sstr4P49660 385 aa14.52□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Dsc3P55850 896 aa14.52□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 ArvcfP98203 962 aa14.52□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Mapkapk3Q3UMW7 384 aa14.52□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 RragdQ7TT45 449 aa14.52□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Arhgap12Q8C0D4 838 aa14.52□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Smoc2Q8CD91 447 aa14.52□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Arel1Q8CHG5 823 aa14.52□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Gbgt1Q8VI38 347 aa14.52□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Slc8b1Q925Q3 585 aa14.52□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Chaf1bQ9D0N7 572 aa14.52□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Rnase10Q9D5A9 208 aa14.52□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Smad9Q9JIW5 430 aa14.52□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Pias4Q9JM05 507 aa14.52□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Phf11cB4XVP9 339 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Gm6569D3YTM9 175 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 P04213 122 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 FlgP11088 336 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Colec11Q3SXB8 272 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Foxk2Q3UCQ1 651 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Q3UK37 420 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Brsk1Q5RJI5 778 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Pfkfb4Q6DTY7 469 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Tas2r131Q7M708 310 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 FukQ7TMC8 1090 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Trim62Q80V85 475 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 SynbQ8BI41 618 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Tspan12Q8BKT6 305 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Chst8Q8BQ86 417 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Tigd4Q8BUZ3 513 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Nrip1Q8CBD1 1161 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Mterf3Q8R3J4 412 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Oit3Q8R4V5 546 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 DhrsxQ8VBZ0 335 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Q922R1 422 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 March2Q99M02 246 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Ly6kQ9CWP4 154 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Aar2Q9D2V5 384 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 S100pbpQ9D5K4 396 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Oser1Q9D722 291 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Tex22Q9D9U4 189 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 TesclQ9DAJ7 231 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Cd302Q9DCG2 228 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Trim39Q9ESN2 488 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Gm13276A0A087WR18 182 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Gm5565A0A0G2JGB2 317 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Arpc4P59999 168 aaKnown RBP14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 NfycP70353 335 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Cxcr5Q04683 374 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Trmt10cQ3UFY8 414 aaKnown RBP14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Satb1Q60611 764 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Dpy19l3Q71B07 716 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Olfr1036Q7TR85 310 aa14.51□□□□□ -0.09
Ushbp1-201ENSMUST00000049184 Lrfn2Q80TG9 788 aa14.51□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 23.2 ms