RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 NlnQ91YP2 704 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Ifitm3Q9CQW9 137 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Slamf8Q9D3G2 278 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 MrrfQ9D6S7 262 aaKnown RBP8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Q9DAD0 168 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Slc28a3Q9ERH8 703 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Jam2Q9JI59 298 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Actl7aQ9QY84 440 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Rdh11Q9QYF1 316 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Disp2Q8CIP5 1345 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 PhipQ8VDD9 1821 aaKnown RBP8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Gm45861A0A1B0GRY3 1923 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Rhbdl2A2AGA4 302 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Ssxb6A2BI74 170 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Tex16F6WNY1 1150 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Hcn1O88704 910 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 CcnkO88874 554 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Il1rl1P14719 567 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Apex1P28352 317 aaKnown RBP8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Hoxd9P28357 339 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Serpina5P70458 405 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Ldb1P70662 411 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 StacP97306 403 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 InhbbQ04999 411 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 SctrQ5FWI2 447 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 NkaplQ5SZT7 395 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 OgnQ62000 298 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Oog2Q7TPX8 476 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 IpmkQ7TT16 396 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Trim23Q8BGX0 574 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Tdp1Q8BJ37 609 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 4932411N23RikQ8C0S0 470 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 N4bp2l2Q8JZS6 575 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 St7lQ8K4P7 559 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 EedQ921E6 441 aaKnown RBP8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Ints11Q9CWS4 600 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Yif1bQ9CX30 311 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Wwp2Q9DBH0 870 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Tlr6Q9EPW9 795 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 ScelQ9EQG3 652 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Tor3aQ9ER38 385 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Nectin1Q9JKF6 515 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Rad21l1A2AU37 552 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Dennd5bA2RSQ0 1274 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Atp6ap1lD3Z5W0 336 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Zfp938E9Q9G3 579 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Sult2a4L7N245 285 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Sh3yl1O08641 340 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Zfp1P08042 402 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 CtsdP18242 410 aaKnown RBP8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 TP20293 436 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Agtr2P35374 363 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Grik2P39087 908 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Gabarapl2P60521 117 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Snrpd2P62317 118 aaKnown RBP8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Galnt3P70419 633 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Tmem173Q3TBT3 378 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Q3TTL0 348 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Hephl1Q3V1H3 1159 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Zbtb8osQ505B7 168 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Usp22Q5DU02 525 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Arhgap1Q5FWK3 439 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 MafkQ61827 156 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Runx1t1Q61909 577 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Pea15Q62048 130 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 St8sia4Q64692 359 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 InavaQ7TN12 663 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Fam49aQ8BHZ0 323 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 FicdQ8BIX9 458 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Ppp1r1cQ8BKK4 108 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Nipal1Q8BMW7 416 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 GmppbQ8BTZ7 360 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Cars2Q8BYM8 551 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 P3h2Q8CG71 703 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Kctd11Q8K485 232 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Tmprss4Q8VCA5 435 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Tbc1d19Q8VDV7 526 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Pwp1Q99LL5 501 aaKnown RBP8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Tceal6Q9DB24 200 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Krt81Q9ERE2 481 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Myg1Q9JK81 380 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Hs6st1Q9QYK5 411 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Carm1Q9WVG6 608 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Scgb2b17S4R2V3 82 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Rpl9-ps6A0A140T8T4 192 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 ZxdbA2CE44 873 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Scml2B1AVB3 969 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Rd3lB2RV38 197 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Gm8113E0CXS8 587 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Olfr1410E9PYK6 323 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Smim18J3QNP2 93 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Polr2jO08740 117 aaKnown RBP8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Gtf2h4O70422 463 aaKnown RBP8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Rpl9P51410 192 aaKnown RBP8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Ufm1P61961 85 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Gch1Q05915 241 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Cpne7Q0VE82 557 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Arl14Q3SXC5 192 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Lsmem1Q3UQS2 128 aa8.13□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Zfp78Q5U406 512 aa8.13□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 32.9 ms