RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Hapln1Q9QUP5 356 aaKnown RBP22.41■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Cdh17Q9R100 827 aa22.41■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Acbd4E9Q289 327 aa22.4■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Vmn2r2L7N2E9 908 aa22.4■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Hcn3O88705 779 aa22.4■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Gatad2aQ8CHY6 629 aaKnown RBP22.4■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Olfr1311Q8VET0 312 aa22.4■■□□□ 1.18
Upf3a-201ENSMUST00000043767 KlbQ99N32 1043 aa22.4■■□□□ 1.18
Upf3a-201ENSMUST00000043767 RpgrQ9R0X5 1001 aa22.4■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Ap1m2Q9WVP1 423 aa22.4■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Cst9Q9Z0H6 137 aa22.4■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Mrgpra2aA0A0R4J1Z0 331 aa22.4■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Tex13aA2AFS9 377 aa22.4■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Gm2237E9Q501 211 aa22.4■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Rnf169E9Q7F2 694 aa22.4■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Gm3591K7N6X2 186 aa22.4■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Opn1mwO35599 359 aa22.4■■□□□ 1.18
Upf3a-201ENSMUST00000043767 IduaP48441 634 aa22.4■■□□□ 1.18
Upf3a-201ENSMUST00000043767 ClgnP52194 611 aa22.4■■□□□ 1.18
Upf3a-201ENSMUST00000043767 PgrQ00175 926 aa22.4■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Nt5c3bQ3UFY7 300 aa22.4■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Itih1Q61702 907 aa22.4■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Tha1Q6XPS7 400 aa22.4■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Smpd4Q6ZPR5 823 aa22.4■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Olfr309Q7TS01 308 aa22.4■■□□□ 1.18
Upf3a-201ENSMUST00000043767 SntnQ8C9X1 147 aa22.4■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Ints10Q8K2A7 710 aaKnown RBP22.4■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Poc5Q9DBS8 558 aa22.4■■□□□ 1.18
Upf3a-201ENSMUST00000043767 FancgQ9EQR6 623 aa22.4■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Nipa2Q9JJC8 359 aa22.4■■□□□ 1.18
Upf3a-201ENSMUST00000043767 H2afyQ9QZQ8 372 aaKnown RBP22.4■■□□□ 1.18
Upf3a-201ENSMUST00000043767 CalcrlQ9R1W5 463 aa22.4■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Anapc1P53995 1944 aaKnown RBP22.4■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Anxa4P97429 319 aa22.39■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Sec31bQ3TZ89 1158 aa22.39■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Kcna5Q61762 602 aa22.39■■□□□ 1.17
Upf3a-201ENSMUST00000043767 RgnQ64374 299 aa22.39■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Ephx4Q6IE26 359 aa22.39■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Acat3Q80X81 397 aa22.39■■□□□ 1.17
Upf3a-201ENSMUST00000043767 ItchQ8C863 864 aa22.39■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Olfr808Q8VGI8 312 aa22.39■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Vmn1r71Q8VIC0 307 aa22.39■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Capn8Q91VA3 703 aa22.39■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Usb1Q91W78 267 aa22.39■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Arpc2Q9CVB6 300 aa22.39■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Dus2Q9D7B1 493 aa22.39■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Fip1l1Q9D824 581 aaKnown RBP22.39■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Ddi1Q9DAF3 408 aa22.39■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Plin3Q9DBG5 437 aa22.39■■□□□ 1.17
Upf3a-201ENSMUST00000043767 PyglQ9ET01 850 aa22.39■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Cul3Q9JLV5 768 aa22.39■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Epb41l4bQ9JMC8 527 aa22.39■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Pdia2D3Z6P0 527 aa22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Adh6aE9Q5Z6 375 aa22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Gm8444F6XS56 118 aa22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Gm2897K7N6T7 172 aa22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Mid1O70583 680 aa22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Krt4P07744 525 aa22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 F9P16294 471 aa22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 HalP35492 657 aa22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Mmp11Q02853 492 aa22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Rsrp1Q3UC65 298 aa22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Naa11Q3UX61 218 aa22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 FntbQ8K2I1 437 aa22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Prpf19Q99KP6 504 aaKnown RBP22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Q9CWU4 180 aaKnown RBP22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Fam13cQ9DBR2 601 aa22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Cyhr1Q9QXA1 311 aa22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 ProdhQ9WU79 599 aa22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Fam71f2B2RXB0 297 aa22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Cldn24D3YXJ9 220 aa22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 St3gal5O88829 414 aa22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 AladP10518 330 aa22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 GhrhrP32082 423 aa22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Mat2aQ3THS6 395 aaKnown RBP22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 DtlQ3TLR7 729 aa22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Fam149b1Q6NSV7 578 aa22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Erich5Q8K0S2 362 aa22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Irak3Q8K4B2 609 aa22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 SuoxQ8R086 546 aa22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Hdac8Q8VH37 377 aa22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Fam3cQ91VU0 227 aa22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 MpstQ99J99 297 aa22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Borcs5Q9D920 195 aa22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Abcb9Q9JJ59 762 aa22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 AadatQ9WVM8 425 aa22.38■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Tnip3A0A1D5RMN0 279 aa22.37■■□□□ 1.17
Upf3a-201ENSMUST00000043767 R3hdmlA2A5I3 253 aa22.37■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Rrn3B2RS91 656 aa22.37■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Zfp105G3X9I0 524 aa22.37■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Vmn2r8L7N472 848 aa22.37■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Akap10O88845 662 aa22.37■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Lhx1P63006 406 aa22.37■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Q14AM7 275 aa22.37■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Slc25a51Q5HZI9 298 aa22.37■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Havcr1Q5QNS5 305 aa22.37■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Cpa6Q5U901 438 aa22.37■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Fastkd1Q6DI86 829 aa22.37■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Mettl20Q80ZM3 255 aa22.37■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Zcchc4Q8BKW4 512 aa22.37■■□□□ 1.17
Retrieved 100 of 22,080 RNA–protein pairs in 31.1 ms