RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 MAGEA12P43365 314 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 POLD2P49005 469 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 PRLHRP49683 370 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 THOP1P52888 689 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 PGGT1BP53609 377 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 TAS2R39P59534 338 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 RAB10P61026 200 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 PDAP1Q13442 181 aaKnown RBP9.21□□□□□ -0.94
PHGDH-228ENST00000641847 ZNF460Q14592 562 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 ZKSCAN8Q15776 578 aaPredicted RBP9.21□□□□□ -0.94
PHGDH-228ENST00000641847 ISXQ2M1V0 245 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 PLA2G4EQ3MJ16 856 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 AGBL2Q5U5Z8 902 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 FOXR1Q6PIV2 292 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 ENPP7Q6UWV6 458 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 TIFABQ6ZNK6 161 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 RAPH1Q70E73 1250 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 KANSL1Q7Z3B3 1105 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 TRABD2AQ86V40 505 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 SPNS2Q8IVW8 549 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 CEP97Q8IW35 865 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 SRRM1Q8IYB3 904 aaKnown RBP9.21□□□□□ -0.94
PHGDH-228ENST00000641847 BEND7Q8N7W2 519 aaPredicted RBP9.21□□□□□ -0.94
PHGDH-228ENST00000641847 SIDT2Q8NBJ9 832 aaKnown RBP9.21□□□□□ -0.94
PHGDH-228ENST00000641847 OR56A4Q8NGH8 313 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 GIMAP7Q8NHV1 300 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 FAM174AQ8TBP5 190 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 PDXPQ96GD0 296 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 ZNF514Q96K75 400 aaPredicted RBP9.21□□□□□ -0.94
PHGDH-228ENST00000641847 PANX3Q96QZ0 392 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 GPR21Q99679 349 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 DUSP23Q9BVJ7 150 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 FGF22Q9HCT0 170 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 SARS2Q9NP81 518 aaKnown RBP9.21□□□□□ -0.94
PHGDH-228ENST00000641847 GPR27Q9NS67 375 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 PCMTD2Q9NV79 361 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 TAS2R13Q9NYV9 303 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 KLQ9UEF7 1012 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 MOSPD1Q9UJG1 213 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 ATXN7L1Q9ULK2 861 aaPredicted RBP9.21□□□□□ -0.94
PHGDH-228ENST00000641847 NOVA2Q9UNW9 492 aaKnown RBP9.21□□□□□ -0.94
PHGDH-228ENST00000641847 SLC17A4Q9Y2C5 497 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 MED16Q9Y2X0 877 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 VWA7Q9Y334 891 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 PCYT1BQ9Y5K3 369 aaPredicted RBP9.21□□□□□ -0.94
PHGDH-228ENST00000641847 A0A096LPK6 155 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 PRSS38A1L453 326 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 GPR89AB7ZAQ6 455 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 GOLGA8RI6L899 631 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 GRID2O43424 1007 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 NUAK1O60285 661 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 DNAJC6O75061 913 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 RFPL1O75677 317 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 TNFSF15O95150 251 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 SYF2O95926 243 aaKnown RBP9.2□□□□□ -0.94
PHGDH-228ENST00000641847 CEACAM5P06731 702 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 FAM87AP0C7U9 286 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 GPR89BP0CG08 455 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 SLC35E2BP0CK96 405 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 DGKAP23743 735 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 CRABP2P29373 138 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 TYK2P29597 1187 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 CCNFP41002 786 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 GNPDA1P46926 289 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 CLCN7P51798 805 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 IRF9Q00978 393 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 TIAL1Q01085 375 aaKnown RBP eCLIP9.2□□□□□ -0.94
PHGDH-228ENST00000641847 GPS2Q13227 327 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 CLN3Q13286 438 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 SYTL3Q4VX76 610 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 HSP90B2PQ58FF3 399 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 TNFAIP8L3Q5GJ75 292 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 KCTD16Q68DU8 428 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 TMEM220Q6QAJ8 160 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 LRRTM4Q86VH4 590 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 GALNT13Q8IUC8 556 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 ZNF547Q8IVP9 402 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 C4orf33Q8N1A6 199 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 FAM26EQ8N5C1 309 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 ZBTB2Q8N680 514 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 WDR36Q8NI36 951 aaKnown RBP9.2□□□□□ -0.94
PHGDH-228ENST00000641847 CD200R1Q8TD46 325 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 OR1E3Q8WZA6 343 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 ELMO1Q92556 727 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 EXTL1Q92935 676 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 TLCD1Q96CP7 247 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 KLHDC7BQ96G42 594 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 PKNOX2Q96KN3 472 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 ATP6V1G3Q96LB4 118 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 SLC30A3Q99726 388 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 SLC25A18Q9H1K4 315 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 VPS11Q9H270 941 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 RMI1Q9H9A7 625 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 CARS2Q9HA77 564 aaKnown RBP9.2□□□□□ -0.94
PHGDH-228ENST00000641847 POPDC3Q9HBV1 291 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 GPAMQ9HCL2 828 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 MRPL40Q9NQ50 206 aaKnown RBP9.2□□□□□ -0.94
PHGDH-228ENST00000641847 KCNK4Q9NYG8 393 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 SENP1Q9P0U3 644 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 GALPQ9UBC7 116 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms