RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 RTTNQ86VV8 2226 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 INTS1Q8N201 2190 aaKnown RBP7.55□□□□□ -1.2
PHGDH-217ENST00000641455 MGAT4DA6NG13 374 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 BTN3A3O00478 584 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 MAP2K7O14733 419 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 MATN3O15232 486 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 USP1O94782 785 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 ZWINTO95229 277 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 PIM1P11309 404 aaPredicted RBP7.55□□□□□ -1.2
PHGDH-217ENST00000641455 MSH3P20585 1137 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 JAM2P57087 298 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 FOLH1Q04609 750 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 DSG2Q14126 1118 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 CEBPEQ15744 281 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 PPP2R5EQ16537 467 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 IFI16Q16666 785 aaKnown RBP7.55□□□□□ -1.2
PHGDH-217ENST00000641455 LONRF1Q17RB8 773 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 LONRF2Q1L5Z9 754 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 LDLRAP1Q5SW96 308 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 METRNLQ641Q3 311 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 TLDC1Q6P9B6 456 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 TTLL10Q6ZVT0 673 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 NT5DC3Q86UY8 548 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 FAM20CQ8IXL6 584 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 KBTBD2Q8IY47 623 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 SIRT6Q8N6T7 355 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 DNAAF3Q8N9W5 541 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 OR11G2Q8NGC1 345 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 BRIX1Q8TDN6 353 aaKnown RBP7.55□□□□□ -1.2
PHGDH-217ENST00000641455 ADAMTS18Q8TE60 1221 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 MAML1Q92585 1016 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.55□□□□□ -1.2
PHGDH-217ENST00000641455 FKBP10Q96AY3 582 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 NACC2Q96BF6 587 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 RBM41Q96IZ5 413 aaKnown RBP7.55□□□□□ -1.2
PHGDH-217ENST00000641455 TRIM7Q9C029 511 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 XKR8Q9H6D3 395 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 FAM60AQ9NP50 221 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 TAB2Q9NYJ8 693 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 ACTR10Q9NZ32 417 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 COQ3Q9NZJ6 369 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 TNFRSF10DQ9UBN6 386 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 AMACRQ9UHK6 382 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 ACSL5Q9ULC5 683 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 MRPS2Q9Y399 296 aaKnown RBP7.55□□□□□ -1.2
PHGDH-217ENST00000641455 HEBP2Q9Y5Z4 205 aa7.55□□□□□ -1.2
PHGDH-217ENST00000641455 DNMT3AQ9Y6K1 912 aaPredicted RBP7.55□□□□□ -1.2
PHGDH-217ENST00000641455 AKAP6Q13023 2319 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 TMEM191CA6NGB0 347 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 FOXO6A8MYZ6 492 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 EPHB6O15197 1021 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 GPR39O43194 453 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 HCRTR1O43613 425 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 UGT1A9O60656 530 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 PRAMEF2O60811 474 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 GADD45BO75293 160 aaPredicted RBP7.54□□□□□ -1.2
PHGDH-217ENST00000641455 MLYCDO95822 493 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 HPP00738 406 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 CTSBP07858 339 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 MMP2P08253 660 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 MYBL2P10244 700 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 RARAP10276 462 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 PYGMP11217 842 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 ATP1A3P13637 1013 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 ACPPP15309 386 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 FOSL1P15407 271 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 ABOP16442 354 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 UGT1A6P19224 532 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 ITGAXP20702 1163 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 UGT1A1P22309 533 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 UGT1A4P22310 534 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 IL1R2P27930 398 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 GALNT2Q10471 571 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 MMRN1Q13201 1228 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 MYBPHQ13203 477 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 NKG7Q16617 165 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 BOLA3Q53S33 107 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 TFDP3Q5H9I0 405 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 GPRC6AQ5T6X5 926 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 CCDC70Q6NSX1 233 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 SARM1Q6SZW1 724 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 SPESP1Q6UW49 350 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 FAM151BQ6UXP7 276 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 C3P1Q6ZMU1 363 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 AMIGO1Q86WK6 493 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 SPPL2CQ8IUH8 684 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 PRSS58Q8IYP2 241 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 TAB3Q8N5C8 712 aaPredicted RBP7.54□□□□□ -1.2
PHGDH-217ENST00000641455 METTL27Q8N6F8 245 aaPredicted RBP7.54□□□□□ -1.2
PHGDH-217ENST00000641455 CCNYQ8ND76 341 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 NAT14Q8WUY8 206 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 DLG3Q92796 817 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 SPSB2Q99619 263 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 NRTNQ99748 197 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 HGH1Q9BTY7 390 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 CRB3Q9BUF7 120 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 XPO4Q9C0E2 1151 aaKnown RBP7.54□□□□□ -1.2
PHGDH-217ENST00000641455 TSPAN10Q9H1Z9 355 aaPredicted RBP7.54□□□□□ -1.2
PHGDH-217ENST00000641455 CXXC4Q9H2H0 198 aa7.54□□□□□ -1.2
PHGDH-217ENST00000641455 WDR54Q9H977 334 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms