RNA–Protein interactions for RNA: ENST00000640209.1

NECAP1-225, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,473 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-225ENST00000640209 CLOCKO15516 846 aa9.16□□□□□ -0.94
NECAP1-225ENST00000640209 BMP10O95393 424 aa9.16□□□□□ -0.94
NECAP1-225ENST00000640209 URODP06132 367 aa9.16□□□□□ -0.94
NECAP1-225ENST00000640209 UMPSP11172 480 aa9.16□□□□□ -0.94
NECAP1-225ENST00000640209 CDH1P12830 882 aa9.16□□□□□ -0.94
NECAP1-225ENST00000640209 SRCP12931 536 aa9.16□□□□□ -0.94
NECAP1-225ENST00000640209 NFKBIAP25963 317 aa9.16□□□□□ -0.94
NECAP1-225ENST00000640209 NEK2P51955 445 aa9.16□□□□□ -0.94
NECAP1-225ENST00000640209 ADARB1P78563 741 aaKnown RBP9.16□□□□□ -0.94
NECAP1-225ENST00000640209 ARHGEF7Q14155 803 aa9.16□□□□□ -0.94
NECAP1-225ENST00000640209 ADRM1Q16186 407 aa9.16□□□□□ -0.94
NECAP1-225ENST00000640209 SULT1C3Q6IMI6 304 aa9.16□□□□□ -0.94
NECAP1-225ENST00000640209 DET1Q7L5Y6 550 aa9.16□□□□□ -0.94
NECAP1-225ENST00000640209 TMC8Q8IU68 726 aa9.16□□□□□ -0.94
NECAP1-225ENST00000640209 SLC22A15Q8IZD6 547 aa9.16□□□□□ -0.94
NECAP1-225ENST00000640209 OR10A6Q8NH74 314 aa9.16□□□□□ -0.94
NECAP1-225ENST00000640209 UBTD2Q8WUN7 234 aa9.16□□□□□ -0.94
NECAP1-225ENST00000640209 FIG4Q92562 907 aa9.16□□□□□ -0.94
NECAP1-225ENST00000640209 ZNF689Q96CS4 500 aaPredicted RBP9.16□□□□□ -0.94
NECAP1-225ENST00000640209 PPP3R2Q96LZ3 170 aa9.16□□□□□ -0.94
NECAP1-225ENST00000640209 ATP13A3Q9H7F0 1226 aa9.16□□□□□ -0.94
NECAP1-225ENST00000640209 ABCB8Q9NUT2 735 aa9.16□□□□□ -0.94
NECAP1-225ENST00000640209 SMPD3Q9NY59 655 aaPredicted RBP9.16□□□□□ -0.94
NECAP1-225ENST00000640209 CD84Q9UIB8 345 aa9.16□□□□□ -0.94
NECAP1-225ENST00000640209 DLGAP4Q9Y2H0 992 aa9.16□□□□□ -0.94
NECAP1-225ENST00000640209 TRIM64A6NGJ6 449 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 PRAMEF4O60810 478 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 SOCS5O75159 536 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 SEC22BO75396 215 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 IGSF6O95976 241 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 NPPAP01160 153 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 FCGR1AP12314 374 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 HLA-FP30511 346 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 SHMT2P34897 504 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 CAPGP40121 348 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 CSNK1DP48730 415 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 TUBA4AP68366 448 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 PPP1R8Q12972 351 aaKnown RBP9.15□□□□□ -0.94
NECAP1-225ENST00000640209 LAPTM5Q13571 262 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 CPSF6Q16630 551 aaKnown RBP eCLIP9.15□□□□□ -0.94
NECAP1-225ENST00000640209 PUS10Q3MIT2 529 aaKnown RBP9.15□□□□□ -0.94
NECAP1-225ENST00000640209 KCTD21Q4G0X4 260 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 AASDHQ4L235 1098 aaPredicted RBP9.15□□□□□ -0.94
NECAP1-225ENST00000640209 PRAMEF9Q5VWM5 478 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 AP1ARQ63HQ0 302 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 USP51Q70EK9 711 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 HTR3DQ70Z44 454 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 LPCAT2Q7L5N7 544 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 TRIM46Q7Z4K8 759 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 ITIH5Q86UX2 942 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 HS3ST5Q8IZT8 346 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 RNF175Q8N4F7 328 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 DHRSXQ8N5I4 330 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 OR2AP1Q8NGE2 309 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 FBXO30Q8TB52 745 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 TMBIM1Q969X1 311 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 ACDQ96AP0 544 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 AURKBQ96GD4 344 aaPredicted RBP9.15□□□□□ -0.94
NECAP1-225ENST00000640209 HIC2Q96JB3 615 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 HTATIP2Q9BUP3 242 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 CFHR5Q9BXR6 569 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 ACPTQ9BZG2 426 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 LRTM1Q9HBL6 345 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 TMEM45AQ9NWC5 275 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 HECAQ9UBI9 543 aaPredicted RBP9.15□□□□□ -0.94
NECAP1-225ENST00000640209 EBF1Q9UH73 591 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 RSL24D1Q9UHA3 163 aaKnown RBP9.15□□□□□ -0.94
NECAP1-225ENST00000640209 MAGEL2Q9UJ55 1249 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 PDE10AQ9Y233 779 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 CCL26Q9Y258 94 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 PCDHGA11Q9Y5H2 935 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 A0A1W2PRU2 124 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 GRXCR2A6NFK2 248 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 AGAP14A8MT82 685 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 B4GAT1O43505 415 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 RGS14O43566 566 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 ULK1O75385 1050 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 MTX2O75431 263 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 TRMUO75648 421 aaKnown RBP9.15□□□□□ -0.94
NECAP1-225ENST00000640209 KCNH1O95259 989 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 PDYNP01213 254 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 ANXA6P08133 673 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 C1SP09871 688 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 BCKDHAP12694 445 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 TACR1P25103 407 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 CA8P35219 290 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 GNPDA1P46926 289 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 CDK9P50750 372 aaKnown RBP9.15□□□□□ -0.94
NECAP1-225ENST00000640209 MAP7Q14244 749 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 CRY1Q16526 586 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 USP39Q53GS9 565 aaKnown RBP9.15□□□□□ -0.94
NECAP1-225ENST00000640209 GRAMD4Q6IC98 578 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 SERPINA13PQ6UXR4 307 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 CHST14Q8NCH0 376 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 ZNF548Q8NEK5 533 aaPredicted RBP9.15□□□□□ -0.94
NECAP1-225ENST00000640209 FIBINQ8TAL6 211 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 ITFG1Q8TB96 612 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 SLC22A17Q8WUG5 538 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 USP7Q93009 1102 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 PYCR2Q96C36 320 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms