RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 MFSD3Q96ES6 412 aa17.19■□□□□ 0.34
PTPN11-207ENST00000639857 HGH1Q9BTY7 390 aa17.19■□□□□ 0.34
PTPN11-207ENST00000639857 TUBB2BQ9BVA1 445 aa17.19■□□□□ 0.34
PTPN11-207ENST00000639857 SLC12A9Q9BXP2 914 aa17.19■□□□□ 0.34
PTPN11-207ENST00000639857 P2RY12Q9H244 342 aa17.19■□□□□ 0.34
PTPN11-207ENST00000639857 FGF21Q9NSA1 209 aa17.19■□□□□ 0.34
PTPN11-207ENST00000639857 OR6C2Q9NZP2 312 aa17.19■□□□□ 0.34
PTPN11-207ENST00000639857 SAMD15Q9P1V8 674 aa17.19■□□□□ 0.34
PTPN11-207ENST00000639857 MARCH4Q9P2E8 410 aaPredicted RBP17.19■□□□□ 0.34
PTPN11-207ENST00000639857 GSAPA4D1B5 854 aa17.18■□□□□ 0.34
PTPN11-207ENST00000639857 BTN3A1O00481 513 aa17.18■□□□□ 0.34
PTPN11-207ENST00000639857 GPC4O75487 556 aa17.18■□□□□ 0.34
PTPN11-207ENST00000639857 NDUFS3O75489 264 aa17.18■□□□□ 0.34
PTPN11-207ENST00000639857 SPAG6O75602 509 aa17.18■□□□□ 0.34
PTPN11-207ENST00000639857 SLCO2B1O94956 709 aa17.18■□□□□ 0.34
PTPN11-207ENST00000639857 FOLR1P15328 257 aa17.18■□□□□ 0.34
PTPN11-207ENST00000639857 OGNP20774 298 aaKnown RBP17.18■□□□□ 0.34
PTPN11-207ENST00000639857 CDH3P22223 829 aa17.18■□□□□ 0.34
PTPN11-207ENST00000639857 ARNTP27540 789 aa17.18■□□□□ 0.34
PTPN11-207ENST00000639857 CCR7P32248 378 aa17.18■□□□□ 0.34
PTPN11-207ENST00000639857 ADARP55265 1226 aaKnown RBP17.18■□□□□ 0.34
PTPN11-207ENST00000639857 MC1RQ01726 317 aa17.18■□□□□ 0.34
PTPN11-207ENST00000639857 SDCCAG8Q86SQ7 713 aaPredicted RBP17.18■□□□□ 0.34
PTPN11-207ENST00000639857 PHC3Q8NDX5 983 aa17.18■□□□□ 0.34
PTPN11-207ENST00000639857 OR5AR1Q8NGP9 310 aa17.18■□□□□ 0.34
PTPN11-207ENST00000639857 SLCO2A1Q92959 643 aa17.18■□□□□ 0.34
PTPN11-207ENST00000639857 STAMBPL1Q96FJ0 436 aa17.18■□□□□ 0.34
PTPN11-207ENST00000639857 CATSPER2Q96P56 530 aa17.18■□□□□ 0.34
PTPN11-207ENST00000639857 TWSG1Q9GZX9 223 aa17.18■□□□□ 0.34
PTPN11-207ENST00000639857 FANCEQ9HB96 536 aa17.18■□□□□ 0.34
PTPN11-207ENST00000639857 TRMT1Q9NXH9 659 aaKnown RBP17.18■□□□□ 0.34
PTPN11-207ENST00000639857 VPS9D1Q9Y2B5 631 aa17.18■□□□□ 0.34
PTPN11-207ENST00000639857 MRFAP1Q9Y605 127 aa17.18■□□□□ 0.34
PTPN11-207ENST00000639857 SNRNP200O75643 2136 aaKnown RBP17.17■□□□□ 0.34
PTPN11-207ENST00000639857 FAM237BA0A1B0GVD1 139 aa17.17■□□□□ 0.34
PTPN11-207ENST00000639857 H3BMM5 538 aa17.17■□□□□ 0.34
PTPN11-207ENST00000639857 BTN3A3O00478 584 aa17.17■□□□□ 0.34
PTPN11-207ENST00000639857 MAP3K7O43318 606 aa17.17■□□□□ 0.34
PTPN11-207ENST00000639857 KIAA0754O94854 1291 aa17.17■□□□□ 0.34
PTPN11-207ENST00000639857 TMEM63AO94886 807 aa17.17■□□□□ 0.34
PTPN11-207ENST00000639857 VAPBO95292 243 aa17.17■□□□□ 0.34
PTPN11-207ENST00000639857 EBLN1P0CF75 366 aa17.17■□□□□ 0.34
PTPN11-207ENST00000639857 AOAHP28039 575 aa17.17■□□□□ 0.34
PTPN11-207ENST00000639857 PRDX3P30048 256 aaKnown RBP17.17■□□□□ 0.34
PTPN11-207ENST00000639857 MAGEA3P43357 314 aa17.17■□□□□ 0.34
PTPN11-207ENST00000639857 ANKRD22Q5VYY1 191 aa17.17■□□□□ 0.34
PTPN11-207ENST00000639857 PTRHD1Q6GMV3 140 aaKnown RBP17.17■□□□□ 0.34
PTPN11-207ENST00000639857 UNC5DQ6UXZ4 953 aa17.17■□□□□ 0.34
PTPN11-207ENST00000639857 CAND1Q86VP6 1230 aaKnown RBP17.17■□□□□ 0.34
PTPN11-207ENST00000639857 ADGRF3Q8IZF5 1079 aa17.17■□□□□ 0.34
PTPN11-207ENST00000639857 MED8Q96G25 268 aa17.17■□□□□ 0.34
PTPN11-207ENST00000639857 SERPINB12Q96P63 405 aa17.17■□□□□ 0.34
PTPN11-207ENST00000639857 FAM117AQ9C073 453 aa17.17■□□□□ 0.34
PTPN11-207ENST00000639857 CHRNA10Q9GZZ6 450 aa17.17■□□□□ 0.34
PTPN11-207ENST00000639857 SOHLH2Q9NX45 425 aa17.17■□□□□ 0.34
PTPN11-207ENST00000639857 LNPEPQ9UIQ6 1025 aa17.17■□□□□ 0.34
PTPN11-207ENST00000639857 ICKQ9UPZ9 632 aa17.17■□□□□ 0.34
PTPN11-207ENST00000639857 CDYLQ9Y232 598 aa17.17■□□□□ 0.34
PTPN11-207ENST00000639857 RPS6KL1Q9Y6S9 549 aa17.17■□□□□ 0.34
PTPN11-207ENST00000639857 SMG1Q96Q15 3661 aaKnown RBP17.16■□□□□ 0.34
PTPN11-207ENST00000639857 LOC101059948A0A1B0GTJ6 334 aa17.16■□□□□ 0.34
PTPN11-207ENST00000639857 SDR42E2A6NKP2 422 aa17.16■□□□□ 0.34
PTPN11-207ENST00000639857 KALRNO60229 2985 aa17.16■□□□□ 0.34
PTPN11-207ENST00000639857 ESR1P03372 595 aa17.16■□□□□ 0.34
PTPN11-207ENST00000639857 CCNYL3P0C7X3 344 aa17.16■□□□□ 0.34
PTPN11-207ENST00000639857 SFTPCP11686 197 aa17.16■□□□□ 0.34
PTPN11-207ENST00000639857 ZNF28P17035 718 aa17.16■□□□□ 0.34
PTPN11-207ENST00000639857 ARCN1P48444 511 aaKnown RBP17.16■□□□□ 0.34
PTPN11-207ENST00000639857 C19orf57Q0VDD7 668 aa17.16■□□□□ 0.34
PTPN11-207ENST00000639857 HSPA14Q0VDF9 509 aa17.16■□□□□ 0.34
PTPN11-207ENST00000639857 PRKG2Q13237 762 aa17.16■□□□□ 0.34
PTPN11-207ENST00000639857 KCNAB1Q14722 419 aa17.16■□□□□ 0.34
PTPN11-207ENST00000639857 BRD3Q15059 726 aa17.16■□□□□ 0.34
PTPN11-207ENST00000639857 CASC4Q6P4E1 433 aa17.16■□□□□ 0.34
PTPN11-207ENST00000639857 LDB1Q86U70 411 aaPredicted RBP17.16■□□□□ 0.34
PTPN11-207ENST00000639857 LMNTD2Q8IXW0 634 aa17.16■□□□□ 0.34
PTPN11-207ENST00000639857 OTUD6BQ8N6M0 293 aa17.16■□□□□ 0.34
PTPN11-207ENST00000639857 ZNF501Q96CX3 271 aaPredicted RBP17.16■□□□□ 0.34
PTPN11-207ENST00000639857 ACTR10Q9NZ32 417 aa17.16■□□□□ 0.34
PTPN11-207ENST00000639857 KCND3Q9UK17 655 aa17.16■□□□□ 0.34
PTPN11-207ENST00000639857 ATRXP46100 2492 aa17.16■□□□□ 0.34
PTPN11-207ENST00000639857 PIPSLA2A3N6 862 aa17.15■□□□□ 0.34
PTPN11-207ENST00000639857 CPNE3O75131 537 aaKnown RBP17.15■□□□□ 0.34
PTPN11-207ENST00000639857 AVILO75366 819 aa17.15■□□□□ 0.34
PTPN11-207ENST00000639857 C1QL1O75973 258 aa17.15■□□□□ 0.34
PTPN11-207ENST00000639857 PLEKHS1Q5SXH7 462 aa17.15■□□□□ 0.34
PTPN11-207ENST00000639857 PWWP2BQ6NUJ5 590 aa17.15■□□□□ 0.34
PTPN11-207ENST00000639857 SPESP1Q6UW49 350 aa17.15■□□□□ 0.34
PTPN11-207ENST00000639857 UNC5AQ6ZN44 842 aa17.15■□□□□ 0.34
PTPN11-207ENST00000639857 TMEM135Q86UB9 458 aa17.15■□□□□ 0.34
PTPN11-207ENST00000639857 DCUN1D3Q8IWE4 304 aa17.15■□□□□ 0.34
PTPN11-207ENST00000639857 PPIL6Q8IXY8 311 aa17.15■□□□□ 0.34
PTPN11-207ENST00000639857 NAT8LQ8N9F0 302 aa17.15■□□□□ 0.34
PTPN11-207ENST00000639857 GALNT6Q8NCL4 622 aa17.15■□□□□ 0.34
PTPN11-207ENST00000639857 GSDMBQ8TAX9 411 aa17.15■□□□□ 0.34
PTPN11-207ENST00000639857 LKAAEAR1Q8TD35 194 aa17.15■□□□□ 0.34
PTPN11-207ENST00000639857 LPGAT1Q92604 370 aa17.15■□□□□ 0.34
PTPN11-207ENST00000639857 ELMO2Q96JJ3 720 aa17.15■□□□□ 0.34
PTPN11-207ENST00000639857 LRFN5Q96NI6 719 aa17.15■□□□□ 0.34
PTPN11-207ENST00000639857 RUNDC3BQ96NL0 473 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms