RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 CCDC159P0C7I6 412 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 CYP4B1P13584 511 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 TACR2P21452 398 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 LPOP22079 712 aaPredicted RBP10.71□□□□□ -0.69
SNIP1-204ENST00000638725 TGM1P22735 817 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 CD6P30203 668 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 HSPA7P48741 367 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 TTPAP49638 278 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 IL1RL1Q01638 556 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 FPGSQ05932 587 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 DGCR6Q14129 220 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 PCBP2Q15366 365 aaKnown RBP eCLIP10.71□□□□□ -0.69
SNIP1-204ENST00000638725 INAVAQ3KP66 663 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 TMEM53Q6P2H8 277 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 TAS2R42Q7RTR8 314 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 MILR1Q7Z6M3 343 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 DSG4Q86SJ6 1040 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 ZCCHC7Q8N3Z6 543 aaKnown RBP10.71□□□□□ -0.69
SNIP1-204ENST00000638725 LIX1Q8N485 282 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 ATAD1Q8NBU5 361 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 PIK3C3Q8NEB9 887 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 CLHC1Q8NHS4 586 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 NETO1Q8TDF5 533 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 S100ZQ8WXG8 99 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 RORBQ92753 470 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 KCNJ9Q92806 393 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 HPS1Q92902 700 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 CCDC97Q96F63 343 aaPredicted RBP10.71□□□□□ -0.69
SNIP1-204ENST00000638725 BARD1Q99728 777 aaKnown RBP10.71□□□□□ -0.69
SNIP1-204ENST00000638725 CINPQ9BW66 212 aaPredicted RBP10.71□□□□□ -0.69
SNIP1-204ENST00000638725 DPY30Q9C005 99 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 POLE4Q9NR33 117 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 DCAF13Q9NV06 445 aaKnown RBP10.71□□□□□ -0.69
SNIP1-204ENST00000638725 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.71□□□□□ -0.69
SNIP1-204ENST00000638725 PCDHB8Q9UN66 801 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 ZNF232Q9UNY5 417 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 FAM32AQ9Y421 112 aaKnown RBP10.71□□□□□ -0.69
SNIP1-204ENST00000638725 MOXD2PA6NHM9 499 aa10.71□□□□□ -0.7
SNIP1-204ENST00000638725 SLC22A1O15245 554 aa10.71□□□□□ -0.7
SNIP1-204ENST00000638725 SLC16A6O15403 523 aa10.71□□□□□ -0.7
SNIP1-204ENST00000638725 ZNF623O75123 536 aa10.71□□□□□ -0.7
SNIP1-204ENST00000638725 PGRP06401 933 aa10.71□□□□□ -0.7
SNIP1-204ENST00000638725 RYKP34925 604 aa10.71□□□□□ -0.7
SNIP1-204ENST00000638725 MASP1P48740 699 aa10.71□□□□□ -0.7
SNIP1-204ENST00000638725 MAP2K5Q13163 448 aa10.71□□□□□ -0.7
SNIP1-204ENST00000638725 SIM2Q14190 667 aaPredicted RBP10.71□□□□□ -0.7
SNIP1-204ENST00000638725 MAPK11Q15759 364 aa10.71□□□□□ -0.7
SNIP1-204ENST00000638725 RUNDC3AQ59EK9 446 aa10.71□□□□□ -0.7
SNIP1-204ENST00000638725 SBSNQ6UWP8 590 aa10.71□□□□□ -0.7
SNIP1-204ENST00000638725 B3GNT8Q7Z7M8 397 aa10.71□□□□□ -0.7
SNIP1-204ENST00000638725 GPR149Q86SP6 731 aa10.71□□□□□ -0.7
SNIP1-204ENST00000638725 CHPFQ8IZ52 775 aa10.71□□□□□ -0.7
SNIP1-204ENST00000638725 PPP3R2Q96LZ3 170 aa10.71□□□□□ -0.7
SNIP1-204ENST00000638725 ADAM2Q99965 735 aa10.71□□□□□ -0.7
SNIP1-204ENST00000638725 TRIT1Q9H3H1 467 aaKnown RBP10.71□□□□□ -0.7
SNIP1-204ENST00000638725 NSUN3Q9H649 340 aaKnown RBP10.71□□□□□ -0.7
SNIP1-204ENST00000638725 VPS9D1Q9Y2B5 631 aa10.71□□□□□ -0.7
SNIP1-204ENST00000638725 PCDHB14Q9Y5E9 798 aa10.71□□□□□ -0.7
SNIP1-204ENST00000638725 PCDHGA10Q9Y5H3 936 aa10.71□□□□□ -0.7
SNIP1-204ENST00000638725 PLXNA3P51805 1871 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 A0A0U1RQF3 1178 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 INSIG1O15503 277 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 OTCP00480 354 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 ITGB6P18564 788 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 NRIP1P48552 1158 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 KCNQ1P51787 676 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 CLCN7P51798 805 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 NCS1P62166 190 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 SGO1Q5FBB7 561 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 MORN1Q5T089 497 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 SUSD1Q6UWL2 747 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 CXCL17Q6UXB2 119 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 ADCK1Q86TW2 530 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 ZNF566Q969W8 418 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 C8orf48Q96LL4 319 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 PSD2Q9BQI7 771 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 RIBC2Q9H4K1 309 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 UBA2Q9UBT2 640 aaPredicted RBP10.7□□□□□ -0.7
SNIP1-204ENST00000638725 EIF3LQ9Y262 564 aaKnown RBP10.7□□□□□ -0.7
SNIP1-204ENST00000638725 PCDHGB1Q9Y5G3 927 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 ORC6Q9Y5N6 252 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 ZBBXA8MT70 800 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 STX7O15400 261 aaKnown RBP10.7□□□□□ -0.7
SNIP1-204ENST00000638725 FFAR2O15552 330 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 IGFBP5P24593 272 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 PSMB9P28065 219 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 TGFBR1P36897 503 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 GDF5P43026 501 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 MGAT3Q09327 533 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 TAF10Q12962 218 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 ACOX1Q15067 660 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 NPTX1Q15818 432 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 DGUOKQ16854 277 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 AGAP7PQ5VUJ5 663 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 CES5AQ6NT32 575 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 P2RY8Q86VZ1 359 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 CYP4Z1Q86W10 505 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 OR6Q1Q8NGQ2 317 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 FBLIM1Q8WUP2 373 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 YIPF6Q96EC8 236 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms