RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 TAF1P21675 1872 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 SNAP29O95721 258 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 IFNW1P05000 195 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 PFKMP08237 780 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 ZNF182P17025 639 aaPredicted RBP16.35■□□□□ 0.21
SCARB2-210ENST00000638567 SRSF11Q05519 484 aaKnown RBP16.35■□□□□ 0.21
SCARB2-210ENST00000638567 QPRTQ15274 297 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 TGFBIQ15582 683 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 UNC50Q53HI1 259 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 RBM48Q5RL73 367 aaKnown RBP16.35■□□□□ 0.21
SCARB2-210ENST00000638567 NANOGP8Q6NSW7 305 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 SNX20Q7Z614 316 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 CXorf40AQ8TE69 158 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 NANOGQ9H9S0 305 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 SMURF2Q9HAU4 748 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 SCML2Q9UQR0 700 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 CITO14578 2027 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 COL2A1P02458 1487 aaPredicted RBP16.34■□□□□ 0.21
SCARB2-210ENST00000638567 TJP1Q07157 1748 aa16.34■□□□□ 0.21
SCARB2-210ENST00000638567 ATG13O75143 517 aa16.34■□□□□ 0.21
SCARB2-210ENST00000638567 PGRP06401 933 aa16.34■□□□□ 0.21
SCARB2-210ENST00000638567 SELPP16109 830 aa16.34■□□□□ 0.21
SCARB2-210ENST00000638567 PSMA1P25786 263 aaKnown RBP16.34■□□□□ 0.21
SCARB2-210ENST00000638567 LSAMPQ13449 338 aa16.34■□□□□ 0.21
SCARB2-210ENST00000638567 MEP1AQ16819 746 aa16.34■□□□□ 0.21
SCARB2-210ENST00000638567 ZSWIM7Q19AV6 140 aa16.34■□□□□ 0.21
SCARB2-210ENST00000638567 C6orf136Q5SQH8 315 aa16.34■□□□□ 0.21
SCARB2-210ENST00000638567 FAM91A1Q658Y4 838 aa16.34■□□□□ 0.21
SCARB2-210ENST00000638567 C16orf62Q7Z3J2 963 aa16.34■□□□□ 0.21
SCARB2-210ENST00000638567 IFNLR1Q8IU57 520 aaPredicted RBP16.34■□□□□ 0.21
SCARB2-210ENST00000638567 TMEM106CQ9BVX2 250 aa16.34■□□□□ 0.21
SCARB2-210ENST00000638567 ADAMTS5Q9UNA0 930 aa16.34■□□□□ 0.21
SCARB2-210ENST00000638567 ZNF232Q9UNY5 417 aa16.34■□□□□ 0.21
SCARB2-210ENST00000638567 PLK4O00444 970 aa16.34■□□□□ 0.21
SCARB2-210ENST00000638567 DENRO43583 198 aaKnown RBP16.34■□□□□ 0.21
SCARB2-210ENST00000638567 MAFKO60675 156 aa16.34■□□□□ 0.21
SCARB2-210ENST00000638567 DIRAS1O95057 198 aa16.34■□□□□ 0.21
SCARB2-210ENST00000638567 CYP11A1P05108 521 aa16.34■□□□□ 0.21
SCARB2-210ENST00000638567 CD36P16671 472 aa16.34■□□□□ 0.21
SCARB2-210ENST00000638567 ALDH3A2P51648 485 aa16.34■□□□□ 0.21
SCARB2-210ENST00000638567 ADGRF1Q5T601 910 aa16.34■□□□□ 0.21
SCARB2-210ENST00000638567 MUS81Q96NY9 551 aa16.34■□□□□ 0.21
SCARB2-210ENST00000638567 MCMBPQ9BTE3 642 aa16.34■□□□□ 0.21
SCARB2-210ENST00000638567 C20orf27Q9GZN8 174 aa16.34■□□□□ 0.21
SCARB2-210ENST00000638567 CCM2LQ9NUG4 571 aaPredicted RBP16.34■□□□□ 0.21
SCARB2-210ENST00000638567 TMA7Q9Y2S6 64 aaKnown RBP16.34■□□□□ 0.21
SCARB2-210ENST00000638567 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.34■□□□□ 0.21
SCARB2-210ENST00000638567 GRID2O43424 1007 aa16.34■□□□□ 0.21
SCARB2-210ENST00000638567 ARSDP51689 593 aa16.34■□□□□ 0.21
SCARB2-210ENST00000638567 ARSFP54793 590 aa16.34■□□□□ 0.21
SCARB2-210ENST00000638567 PTPN5P54829 565 aa16.34■□□□□ 0.21
SCARB2-210ENST00000638567 SCAPQ12770 1279 aa16.34■□□□□ 0.21
SCARB2-210ENST00000638567 MFSD4BQ5TF39 518 aa16.34■□□□□ 0.21
SCARB2-210ENST00000638567 C17orf64Q86WR6 236 aa16.34■□□□□ 0.21
SCARB2-210ENST00000638567 AP2M1Q96CW1 435 aa16.34■□□□□ 0.21
SCARB2-210ENST00000638567 IMP4Q96G21 291 aaKnown RBP16.34■□□□□ 0.21
SCARB2-210ENST00000638567 DNAAF2Q9NVR5 837 aaKnown RBP16.34■□□□□ 0.21
SCARB2-210ENST00000638567 EMCNQ9ULC0 261 aa16.34■□□□□ 0.21
SCARB2-210ENST00000638567 FADS2P1A8MWK0 482 aa16.33■□□□□ 0.21
SCARB2-210ENST00000638567 CLIC1O00299 241 aa16.33■□□□□ 0.21
SCARB2-210ENST00000638567 HAT1O14929 419 aa16.33■□□□□ 0.21
SCARB2-210ENST00000638567 CD68P34810 354 aaPredicted RBP16.33■□□□□ 0.21
SCARB2-210ENST00000638567 TPTEP56180 551 aa16.33■□□□□ 0.21
SCARB2-210ENST00000638567 STX4Q12846 297 aa16.33■□□□□ 0.21
SCARB2-210ENST00000638567 SMYD5Q6GMV2 418 aa16.33■□□□□ 0.21
SCARB2-210ENST00000638567 OR4F3Q6IEY1 312 aa16.33■□□□□ 0.21
SCARB2-210ENST00000638567 TRNP1Q6NT89 227 aa16.33■□□□□ 0.21
SCARB2-210ENST00000638567 BHLHB9Q6PI77 547 aa16.33■□□□□ 0.21
SCARB2-210ENST00000638567 FAM131AQ6UXB0 335 aa16.33■□□□□ 0.21
SCARB2-210ENST00000638567 UXS1Q8NBZ7 420 aa16.33■□□□□ 0.21
SCARB2-210ENST00000638567 ZNF671Q8TAW3 534 aa16.33■□□□□ 0.21
SCARB2-210ENST00000638567 PLD4Q96BZ4 506 aa16.33■□□□□ 0.21
SCARB2-210ENST00000638567 ISOC1Q96CN7 298 aa16.33■□□□□ 0.21
SCARB2-210ENST00000638567 SLC45A3Q96JT2 553 aa16.33■□□□□ 0.21
SCARB2-210ENST00000638567 DUSP26Q9BV47 211 aa16.33■□□□□ 0.21
SCARB2-210ENST00000638567 ADAMTS10Q9H324 1103 aa16.33■□□□□ 0.21
SCARB2-210ENST00000638567 RPF2Q9H7B2 306 aaKnown RBP16.33■□□□□ 0.21
SCARB2-210ENST00000638567 GIN1Q9NXP7 522 aa16.33■□□□□ 0.21
SCARB2-210ENST00000638567 RUVBL1Q9Y265 456 aaKnown RBP16.33■□□□□ 0.21
SCARB2-210ENST00000638567 ILVBLA1L0T0 632 aa16.33■□□□□ 0.2
SCARB2-210ENST00000638567 SAGE2PA6NJ88 616 aa16.33■□□□□ 0.2
SCARB2-210ENST00000638567 EFCAB9A8MZ26 197 aa16.33■□□□□ 0.2
SCARB2-210ENST00000638567 LOC730098B7Z3J9 87 aa16.33■□□□□ 0.2
SCARB2-210ENST00000638567 SLC9A3R1O14745 358 aaPredicted RBP16.33■□□□□ 0.2
SCARB2-210ENST00000638567 GRM6O15303 877 aa16.33■□□□□ 0.2
SCARB2-210ENST00000638567 STX11O75558 287 aa16.33■□□□□ 0.2
SCARB2-210ENST00000638567 SSR2P43308 183 aa16.33■□□□□ 0.2
SCARB2-210ENST00000638567 MAGEA6P43360 314 aa16.33■□□□□ 0.2
SCARB2-210ENST00000638567 SERINC3Q13530 473 aa16.33■□□□□ 0.2
SCARB2-210ENST00000638567 LAPTM4AQ15012 233 aa16.33■□□□□ 0.2
SCARB2-210ENST00000638567 GOLGA7Q7Z5G4 137 aa16.33■□□□□ 0.2
SCARB2-210ENST00000638567 OMA1Q96E52 524 aa16.33■□□□□ 0.2
SCARB2-210ENST00000638567 PPP1R16AQ96I34 528 aa16.33■□□□□ 0.2
SCARB2-210ENST00000638567 TOR3AQ9H497 397 aa16.33■□□□□ 0.2
SCARB2-210ENST00000638567 MYO5AQ9Y4I1 1855 aaKnown RBP16.33■□□□□ 0.2
SCARB2-210ENST00000638567 PER2O15055 1255 aa16.33■□□□□ 0.2
SCARB2-210ENST00000638567 ATP4BP51164 291 aa16.33■□□□□ 0.2
SCARB2-210ENST00000638567 ZDHHC20Q5W0Z9 365 aa16.33■□□□□ 0.2
SCARB2-210ENST00000638567 NANOGNBQ7Z5D8 188 aa16.33■□□□□ 0.2
SCARB2-210ENST00000638567 TEX47Q8TBZ9 253 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms