RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 ACY1Q03154 408 aa17.19■□□□□ 0.34
PNKP-230ENST00000638016 ABRQ12979 859 aa17.19■□□□□ 0.34
PNKP-230ENST00000638016 PRKAA1Q13131 559 aa17.19■□□□□ 0.34
PNKP-230ENST00000638016 SYTL3Q4VX76 610 aa17.19■□□□□ 0.34
PNKP-230ENST00000638016 ZNF605Q86T29 641 aa17.19■□□□□ 0.34
PNKP-230ENST00000638016 AMIGO1Q86WK6 493 aa17.19■□□□□ 0.34
PNKP-230ENST00000638016 KMT5CQ86Y97 462 aa17.19■□□□□ 0.34
PNKP-230ENST00000638016 REXO1L1PQ8IX06 675 aa17.19■□□□□ 0.34
PNKP-230ENST00000638016 MPP5Q8N3R9 675 aa17.19■□□□□ 0.34
PNKP-230ENST00000638016 SLC38A9Q8NBW4 561 aa17.19■□□□□ 0.34
PNKP-230ENST00000638016 COG1Q8WTW3 980 aa17.19■□□□□ 0.34
PNKP-230ENST00000638016 CT55Q8WUE5 264 aa17.19■□□□□ 0.34
PNKP-230ENST00000638016 MAIP1Q8WWC4 291 aa17.19■□□□□ 0.34
PNKP-230ENST00000638016 MFSD3Q96ES6 412 aa17.19■□□□□ 0.34
PNKP-230ENST00000638016 TRIT1Q9H3H1 467 aaKnown RBP17.19■□□□□ 0.34
PNKP-230ENST00000638016 TFB2MQ9H5Q4 396 aaKnown RBP17.19■□□□□ 0.34
PNKP-230ENST00000638016 MVB12BQ9H7P6 319 aa17.19■□□□□ 0.34
PNKP-230ENST00000638016 CATSPERZQ9NTU4 200 aa17.19■□□□□ 0.34
PNKP-230ENST00000638016 SPHK1Q9NYA1 384 aa17.19■□□□□ 0.34
PNKP-230ENST00000638016 ACTR10Q9NZ32 417 aa17.19■□□□□ 0.34
PNKP-230ENST00000638016 CDYLQ9Y232 598 aa17.19■□□□□ 0.34
PNKP-230ENST00000638016 BTRCQ9Y297 605 aa17.19■□□□□ 0.34
PNKP-230ENST00000638016 TDRKHQ9Y2W6 561 aaKnown RBP17.19■□□□□ 0.34
PNKP-230ENST00000638016 FER1L5A0AVI2 2057 aa17.19■□□□□ 0.34
PNKP-230ENST00000638016 SEC16AO15027 2179 aa17.18■□□□□ 0.34
PNKP-230ENST00000638016 KATNA1O75449 491 aa17.18■□□□□ 0.34
PNKP-230ENST00000638016 TMEM63AO94886 807 aa17.18■□□□□ 0.34
PNKP-230ENST00000638016 RPS18P62269 152 aaKnown RBP17.18■□□□□ 0.34
PNKP-230ENST00000638016 TUBB4BP68371 445 aa17.18■□□□□ 0.34
PNKP-230ENST00000638016 HSPA14Q0VDF9 509 aa17.18■□□□□ 0.34
PNKP-230ENST00000638016 GPS1Q13098 491 aa17.18■□□□□ 0.34
PNKP-230ENST00000638016 TUBB2AQ13885 445 aa17.18■□□□□ 0.34
PNKP-230ENST00000638016 KCNJ11Q14654 390 aa17.18■□□□□ 0.34
PNKP-230ENST00000638016 DEFB109BQ30KR1 87 aa17.18■□□□□ 0.34
PNKP-230ENST00000638016 BORAQ6PGQ7 559 aa17.18■□□□□ 0.34
PNKP-230ENST00000638016 UNC5AQ6ZN44 842 aa17.18■□□□□ 0.34
PNKP-230ENST00000638016 FAM20CQ8IXL6 584 aa17.18■□□□□ 0.34
PNKP-230ENST00000638016 SLC35F6Q8N357 371 aa17.18■□□□□ 0.34
PNKP-230ENST00000638016 RASGEF1CQ8N431 466 aa17.18■□□□□ 0.34
PNKP-230ENST00000638016 TUBB2BQ9BVA1 445 aa17.18■□□□□ 0.34
PNKP-230ENST00000638016 LHX9Q9NQ69 397 aa17.18■□□□□ 0.34
PNKP-230ENST00000638016 IL1RAPL1Q9NZN1 696 aa17.18■□□□□ 0.34
PNKP-230ENST00000638016 KRT87PA6NCN2 255 aa17.17■□□□□ 0.34
PNKP-230ENST00000638016 B8ZZF3 427 aa17.17■□□□□ 0.34
PNKP-230ENST00000638016 CD3EAPO15446 510 aaKnown RBP17.17■□□□□ 0.34
PNKP-230ENST00000638016 HCRTR1O43613 425 aa17.17■□□□□ 0.34
PNKP-230ENST00000638016 KRT14P02533 472 aa17.17■□□□□ 0.34
PNKP-230ENST00000638016 GSTM1P09488 218 aa17.17■□□□□ 0.34
PNKP-230ENST00000638016 TCN2P20062 427 aa17.17■□□□□ 0.34
PNKP-230ENST00000638016 TPSB2P20231 275 aa17.17■□□□□ 0.34
PNKP-230ENST00000638016 PEBP1P30086 187 aaKnown RBP17.17■□□□□ 0.34
PNKP-230ENST00000638016 POLE2P56282 527 aa17.17■□□□□ 0.34
PNKP-230ENST00000638016 GSTM4Q03013 218 aa17.17■□□□□ 0.34
PNKP-230ENST00000638016 GPS2Q13227 327 aa17.17■□□□□ 0.34
PNKP-230ENST00000638016 DNASE1L3Q13609 305 aa17.17■□□□□ 0.34
PNKP-230ENST00000638016 LAMB3Q13751 1172 aa17.17■□□□□ 0.34
PNKP-230ENST00000638016 ERV3-1Q14264 604 aa17.17■□□□□ 0.34
PNKP-230ENST00000638016 TPSAB1Q15661 275 aa17.17■□□□□ 0.34
PNKP-230ENST00000638016 ZNF789Q5FWF6 425 aa17.17■□□□□ 0.34
PNKP-230ENST00000638016 LYPLAL1Q5VWZ2 237 aa17.17■□□□□ 0.34
PNKP-230ENST00000638016 LCN10Q6JVE6 187 aa17.17■□□□□ 0.34
PNKP-230ENST00000638016 LRRC8BQ6P9F7 803 aa17.17■□□□□ 0.34
PNKP-230ENST00000638016 ZNF449Q6P9G9 518 aa17.17■□□□□ 0.34
PNKP-230ENST00000638016 NLRP9Q7RTR0 991 aa17.17■□□□□ 0.34
PNKP-230ENST00000638016 TMEM126BQ8IUX1 230 aa17.17■□□□□ 0.34
PNKP-230ENST00000638016 OR1L3Q8NH93 324 aa17.17■□□□□ 0.34
PNKP-230ENST00000638016 FLVCR1-AS1Q8TAF5 88 aa17.17■□□□□ 0.34
PNKP-230ENST00000638016 MAGOHBQ96A72 148 aaKnown RBP17.17■□□□□ 0.34
PNKP-230ENST00000638016 SGSM3Q96HU1 749 aa17.17■□□□□ 0.34
PNKP-230ENST00000638016 TRAPPC9Q96Q05 1148 aa17.17■□□□□ 0.34
PNKP-230ENST00000638016 PITPNM3Q9BZ71 974 aa17.17■□□□□ 0.34
PNKP-230ENST00000638016 IL22Q9GZX6 179 aa17.17■□□□□ 0.34
PNKP-230ENST00000638016 C1GALT1Q9NS00 363 aa17.17■□□□□ 0.34
PNKP-230ENST00000638016 TRMT1Q9NXH9 659 aaKnown RBP17.17■□□□□ 0.34
PNKP-230ENST00000638016 RUVBL2Q9Y230 463 aaKnown RBP17.17■□□□□ 0.34
PNKP-230ENST00000638016 TMEM150CB9EJG8 249 aa17.16■□□□□ 0.34
PNKP-230ENST00000638016 QSOX1O00391 747 aa17.16■□□□□ 0.34
PNKP-230ENST00000638016 ZNF185O15231 689 aa17.16■□□□□ 0.34
PNKP-230ENST00000638016 NRDCO43847 1150 aa17.16■□□□□ 0.34
PNKP-230ENST00000638016 SCRG1O75711 98 aa17.16■□□□□ 0.34
PNKP-230ENST00000638016 VAPBO95292 243 aa17.16■□□□□ 0.34
PNKP-230ENST00000638016 CTSBP07858 339 aa17.16■□□□□ 0.34
PNKP-230ENST00000638016 UGT2B7P16662 529 aa17.16■□□□□ 0.34
PNKP-230ENST00000638016 ZIC1Q15915 447 aa17.16■□□□□ 0.34
PNKP-230ENST00000638016 DEFB110Q30KQ9 67 aa17.16■□□□□ 0.34
PNKP-230ENST00000638016 CTSL3PQ5NE16 218 aa17.16■□□□□ 0.34
PNKP-230ENST00000638016 FAM69BQ5VUD6 431 aa17.16■□□□□ 0.34
PNKP-230ENST00000638016 CDHR3Q6ZTQ4 885 aa17.16■□□□□ 0.34
PNKP-230ENST00000638016 C2orf73Q8N5S3 287 aaPredicted RBP17.16■□□□□ 0.34
PNKP-230ENST00000638016 OR5K2Q8NHB8 316 aa17.16■□□□□ 0.34
PNKP-230ENST00000638016 CFAP61Q8NHU2 1237 aa17.16■□□□□ 0.34
PNKP-230ENST00000638016 CPT1BQ92523 772 aa17.16■□□□□ 0.34
PNKP-230ENST00000638016 PEX13Q92968 403 aa17.16■□□□□ 0.34
PNKP-230ENST00000638016 FAM136AQ96C01 138 aa17.16■□□□□ 0.34
PNKP-230ENST00000638016 IL17FQ96PD4 163 aa17.16■□□□□ 0.34
PNKP-230ENST00000638016 OR2A14Q96R47 310 aa17.16■□□□□ 0.34
PNKP-230ENST00000638016 KIFC1Q9BW19 673 aa17.16■□□□□ 0.34
PNKP-230ENST00000638016 P2RY12Q9H244 342 aa17.16■□□□□ 0.34
PNKP-230ENST00000638016 FAM60AQ9NP50 221 aa17.16■□□□□ 0.34
PNKP-230ENST00000638016 STARD5Q9NSY2 213 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms