RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 TMEM220Q6QAJ8 160 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 ASB18Q6ZVZ8 466 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 SIRT2Q8IXJ6 389 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 COQ8AQ8NI60 647 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 TM9SF4Q92544 642 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 ZNF514Q96K75 400 aaPredicted RBP5.47□□□□□ -1.53
SCN1A-209ENST00000635750 CNDP2Q96KP4 475 aaKnown RBP5.47□□□□□ -1.53
SCN1A-209ENST00000635750 ACO2Q99798 780 aaKnown RBP5.47□□□□□ -1.53
SCN1A-209ENST00000635750 SEZ6LQ9BYH1 1024 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 PAK6Q9NQU5 681 aaPredicted RBP5.47□□□□□ -1.53
SCN1A-209ENST00000635750 CYTH4Q9UIA0 394 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 DPPA5A6NC42 116 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 FAM86B1E9PN63 330 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 CLDN5O00501 218 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 BCKDKO14874 412 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 SYN3O14994 580 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 RARAP10276 462 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 PECAM1P16284 738 aaPredicted RBP5.47□□□□□ -1.53
SCN1A-209ENST00000635750 TSHRP16473 764 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 GOT1P17174 413 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 ARRB1P49407 418 aaPredicted RBP5.47□□□□□ -1.53
SCN1A-209ENST00000635750 FLT3LGP49771 235 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 GTF2H2Q13888 395 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 ZFP69Q49AA0 526 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 PTPN20Q4JDL3 420 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 PERM1Q5SV97 790 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 GTF2H2CQ6P1K8 395 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 SLC9B2Q86UD5 537 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 LIX1LQ8IVB5 337 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 GPR65Q8IYL9 337 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 OR2T12Q8NG77 320 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 SMARCD2Q92925 531 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 NUS1Q96E22 293 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 ADAD1Q96M93 576 aaKnown RBP5.47□□□□□ -1.53
SCN1A-209ENST00000635750 MBOAT7Q96N66 472 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 CSPG4P5Q96PW8 444 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 NUDT4Q9NZJ9 180 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 KCNS2Q9ULS6 477 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 ZSCAN5BA6NJL1 495 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 CLPXO76031 633 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 RPL10P27635 214 aaKnown RBP5.47□□□□□ -1.53
SCN1A-209ENST00000635750 S100A7P31151 101 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 NCBP2P52298 156 aaKnown RBP eCLIP5.47□□□□□ -1.532e-9■□□□□ 10.6
SCN1A-209ENST00000635750 AP2S1P53680 142 aaPredicted RBP5.47□□□□□ -1.53
SCN1A-209ENST00000635750 S100A12P80511 92 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 TAF10Q12962 218 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 SF3B4Q15427 424 aaKnown RBP eCLIP5.47□□□□□ -1.53
SCN1A-209ENST00000635750 SLC25A52Q3SY17 297 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 FAM76BQ5HYJ3 339 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 SPDYCQ5MJ68 293 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 SDHAF4Q5VUM1 108 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 ANKRD23Q86SG2 305 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 SLITRK4Q8IW52 837 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 CEP76Q8TAP6 659 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 TRMT10AQ8TBZ6 339 aaKnown RBP5.47□□□□□ -1.53
SCN1A-209ENST00000635750 C2orf15Q8WU43 125 aaKnown RBP5.47□□□□□ -1.53
SCN1A-209ENST00000635750 FCRL2Q96LA5 508 aaPredicted RBP5.47□□□□□ -1.53
SCN1A-209ENST00000635750 TPK1Q9H3S4 243 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 ASB6Q9NWX5 421 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 CD84Q9UIB8 345 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 TRAF6Q9Y4K3 522 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 A0A1B0GVM2 712 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 TCAF2A6NFQ2 919 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 MPPED1O15442 326 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 CYP11A1P05108 521 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 SYPP08247 313 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 MMP3P08254 477 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 RFX5P48382 616 aaPredicted RBP5.47□□□□□ -1.53
SCN1A-209ENST00000635750 MAZP56270 477 aaKnown RBP5.47□□□□□ -1.53
SCN1A-209ENST00000635750 TUSC3Q13454 348 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 ESCO2Q56NI9 601 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 TTMPQ5BVD1 217 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 C9orf57Q5W0N0 161 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 RAB43Q86YS6 212 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 CPNE9Q8IYJ1 553 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 LRRC52Q8N7C0 313 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 ZNF676Q8N7Q3 588 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 Q8N9G6 341 aaPredicted RBP5.47□□□□□ -1.53
SCN1A-209ENST00000635750 POC1BQ8TC44 478 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 CAVIN3Q969G5 261 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 CAMK1GQ96NX5 476 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 TCF12Q99081 682 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 PTPN18Q99952 460 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 ZNF700Q9H0M5 742 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 TRPV4Q9HBA0 871 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 HPF1Q9NWY4 346 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 ZNF282Q9UDV7 671 aaPredicted RBP5.47□□□□□ -1.53
SCN1A-209ENST00000635750 SLC7A11Q9UPY5 501 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 ELOVL7A1L3X0 281 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 ANKRD34BA5PLL1 514 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 BTBD19C9JJ37 291 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 NPIPA2E9PIF3 369 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 NPIPA3F8WFD2 350 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 IPO13O94829 963 aaKnown RBP5.47□□□□□ -1.53
SCN1A-209ENST00000635750 KDM4BO94953 1096 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 ANXA3P12429 323 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 GP1BBP13224 206 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 SCGB2A2Q13296 93 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 NFATC2Q13469 925 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 DECR1Q16698 335 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms