RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 ITM2BQ9Y287 266 aa21.58■■□□□ 1.04
PNKP-220ENST00000627232 MKI67P46013 3256 aaKnown RBP21.57■■□□□ 1.04
PNKP-220ENST00000627232 LOC730098B7Z3J9 87 aa21.57■■□□□ 1.04
PNKP-220ENST00000627232 MANBAO00462 879 aa21.57■■□□□ 1.04
PNKP-220ENST00000627232 CASQ2O14958 399 aaPredicted RBP21.57■■□□□ 1.04
PNKP-220ENST00000627232 EEDO75530 441 aaKnown RBP21.57■■□□□ 1.04
PNKP-220ENST00000627232 GSTM1P09488 218 aa21.57■■□□□ 1.04
PNKP-220ENST00000627232 OPRD1P41143 372 aa21.57■■□□□ 1.04
PNKP-220ENST00000627232 EIF2DP41214 584 aaKnown RBP21.57■■□□□ 1.04
PNKP-220ENST00000627232 POLR2JP52435 117 aaKnown RBP21.57■■□□□ 1.04
PNKP-220ENST00000627232 GSTM4Q03013 218 aa21.57■■□□□ 1.04
PNKP-220ENST00000627232 TMEM115Q12893 351 aaPredicted RBP21.57■■□□□ 1.04
PNKP-220ENST00000627232 RUNX3Q13761 415 aa21.57■■□□□ 1.04
PNKP-220ENST00000627232 RAB30Q15771 203 aa21.57■■□□□ 1.04
PNKP-220ENST00000627232 AP5B1Q2VPB7 878 aa21.57■■□□□ 1.04
PNKP-220ENST00000627232 DSG4Q86SJ6 1040 aa21.57■■□□□ 1.04
PNKP-220ENST00000627232 ZNF184Q99676 751 aaPredicted RBP21.57■■□□□ 1.04
PNKP-220ENST00000627232 CCM2Q9BSQ5 444 aa21.57■■□□□ 1.04
PNKP-220ENST00000627232 WRAP53Q9BUR4 548 aaKnown RBP21.57■■□□□ 1.04
PNKP-220ENST00000627232 C1orf50Q9BV19 199 aa21.57■■□□□ 1.04
PNKP-220ENST00000627232 RNF11Q9Y3C5 154 aa21.57■■□□□ 1.04
PNKP-220ENST00000627232 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.56■■□□□ 1.04
PNKP-220ENST00000627232 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.56■■□□□ 1.04
PNKP-220ENST00000627232 OR2AG2A6NM03 316 aa21.56■■□□□ 1.04
PNKP-220ENST00000627232 IFRD1O00458 451 aaPredicted RBP21.56■■□□□ 1.04
PNKP-220ENST00000627232 ULK1O75385 1050 aa21.56■■□□□ 1.04
PNKP-220ENST00000627232 ADRB3P13945 408 aa21.56■■□□□ 1.04
PNKP-220ENST00000627232 UFM1P61960 85 aa21.56■■□□□ 1.04
PNKP-220ENST00000627232 NLRP8Q86W28 1048 aa21.56■■□□□ 1.04
PNKP-220ENST00000627232 TMEM126BQ8IUX1 230 aa21.56■■□□□ 1.04
PNKP-220ENST00000627232 SUSD6Q92537 303 aa21.56■■□□□ 1.04
PNKP-220ENST00000627232 USP7Q93009 1102 aa21.56■■□□□ 1.04
PNKP-220ENST00000627232 FBXL8Q96CD0 374 aa21.56■■□□□ 1.04
PNKP-220ENST00000627232 IGFLR1Q9H665 355 aa21.56■■□□□ 1.04
PNKP-220ENST00000627232 ASIC5Q9NY37 505 aa21.56■■□□□ 1.04
PNKP-220ENST00000627232 THAP10Q9P2Z0 257 aaPredicted RBP21.56■■□□□ 1.04
PNKP-220ENST00000627232 KLQ9UEF7 1012 aa21.56■■□□□ 1.04
PNKP-220ENST00000627232 LEF1Q9UJU2 399 aaPredicted RBP21.56■■□□□ 1.04
PNKP-220ENST00000627232 SLC5A10A0PJK1 596 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 TBC1D3BA6NDS4 549 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 PRORSD1PA6NEY8 169 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 C1QTNF3-AMACRE9PGA6 284 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 PSIP1O75475 530 aaKnown RBP21.55■■□□□ 1.04
PNKP-220ENST00000627232 NPPAP01160 153 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 KRT6AP02538 564 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 KRT6BP04259 564 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 EPORP19235 508 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 KRT6CP48668 564 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 SLC7A2P52569 658 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 PRKG2Q13237 762 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 MAP7D1Q3KQU3 841 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 ZNF648Q5T619 568 aaPredicted RBP21.55■■□□□ 1.04
PNKP-220ENST00000627232 ANKRD54Q6NXT1 300 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 ZFAND4Q86XD8 727 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 YAF2Q8IY57 180 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 PQLC1Q8N2U9 271 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 BEND7Q8N7W2 519 aaPredicted RBP21.55■■□□□ 1.04
PNKP-220ENST00000627232 PROKR1Q8TCW9 393 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 TMEM159Q96B96 161 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 LRRC58Q96CX6 371 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 MRPL38Q96DV4 380 aaKnown RBP21.55■■□□□ 1.04
PNKP-220ENST00000627232 NUS1Q96E22 293 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 TEX37Q96LM6 180 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 P2RY13Q9BPV8 354 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 ZCCHC2Q9C0B9 1178 aaKnown RBP21.55■■□□□ 1.04
PNKP-220ENST00000627232 DYRK4Q9NR20 520 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 EPOPA6NHQ4 379 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 CCDC154A6NI56 674 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 FXYD1O00168 92 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 TSPAN6O43657 245 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 GJA4P35212 333 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 MSX2P35548 267 aaPredicted RBP21.55■■□□□ 1.04
PNKP-220ENST00000627232 METAP1P53582 386 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 CTSCP53634 463 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 MRPS22P82650 360 aaKnown RBP21.55■■□□□ 1.04
PNKP-220ENST00000627232 DPTQ07507 201 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 TLR1Q15399 786 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 BCL7AQ4VC05 210 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 SYTL3Q4VX76 610 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 IL23RQ5VWK5 629 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 CYP20A1Q6UW02 462 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 RAB7BQ96AH8 199 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 ACTR8Q9H981 624 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 DNAJC11Q9NVH1 559 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 ZNF490Q9ULM2 529 aaPredicted RBP21.55■■□□□ 1.04
PNKP-220ENST00000627232 CNOT6Q9ULM6 557 aaKnown RBP21.55■■□□□ 1.04
PNKP-220ENST00000627232 EIF3LQ9Y262 564 aaKnown RBP21.55■■□□□ 1.04
PNKP-220ENST00000627232 LRCH1Q9Y2L9 728 aa21.55■■□□□ 1.04
PNKP-220ENST00000627232 ZFC3H1O60293 1989 aaKnown RBP21.54■■□□□ 1.04
PNKP-220ENST00000627232 FFAR3O14843 346 aa21.54■■□□□ 1.04
PNKP-220ENST00000627232 GPR42O15529 346 aa21.54■■□□□ 1.04
PNKP-220ENST00000627232 PEX1O43933 1283 aa21.54■■□□□ 1.04
PNKP-220ENST00000627232 RECQL5O94762 991 aaPredicted RBP21.54■■□□□ 1.04
PNKP-220ENST00000627232 STAMBPO95630 424 aa21.54■■□□□ 1.04
PNKP-220ENST00000627232 C8BP07358 591 aa21.54■■□□□ 1.04
PNKP-220ENST00000627232 HSD17B1P14061 328 aa21.54■■□□□ 1.04
PNKP-220ENST00000627232 TCN1P20061 433 aaPredicted RBP21.54■■□□□ 1.04
PNKP-220ENST00000627232 ZXDCQ2QGD7 858 aaPredicted RBP21.54■■□□□ 1.04
PNKP-220ENST00000627232 PTCHD3Q3KNS1 767 aa21.54■■□□□ 1.04
PNKP-220ENST00000627232 SYCE2Q6PIF2 218 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms