RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 SHQ1Q6PI26 577 aaKnown RBP4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 KDELC1Q6UW63 502 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 GDPD3Q7L5L3 318 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 VN1R5Q7Z5H4 357 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 B3GNT8Q7Z7M8 397 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 C11orf74Q86VG3 221 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 TSPYL5Q86VY4 417 aaPredicted RBP4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 SNX29P2Q8IUI4 249 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 LIX1LQ8IVB5 337 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 ARHGAP12Q8IWW6 846 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 TOP6BLQ8N6T0 577 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 AMER2Q8N7J2 671 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 C2orf69Q8N8R5 385 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 LSM14AQ8ND56 463 aaKnown RBP4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 OR6J1Q8NGC5 347 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 NPLOC4Q8TAT6 608 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 STAG3L4Q8TBR4 150 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 PROKR1Q8TCW9 393 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 SLC2A14Q8TDB8 520 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 KIAA1191Q96A73 305 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 RHBDF1Q96CC6 855 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 SLC47A1Q96FL8 570 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 PTPN18Q99952 460 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 FDXACB1Q9BRP7 624 aaPredicted RBP4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 ITPAQ9BY32 194 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 DERL2Q9GZP9 239 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 CCDC90BQ9GZT6 254 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 CLPBQ9H078 707 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 SLC25A51Q9H1U9 297 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 PRM3Q9NNZ6 103 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 CNGB3Q9NQW8 809 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 PLCXD1Q9NUJ7 323 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 INTS7Q9NVH2 962 aaKnown RBP4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 UBP1Q9NZI7 540 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 ERVK-18Q9QC07 812 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 RAPGEFL1Q9UHV5 662 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 ADGRE2Q9UHX3 823 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 Q9Y3F1 56 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 PCDHGB2Q9Y5G2 931 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 MAGED1Q9Y5V3 778 aaPredicted RBP4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 PLXNA4Q9HCM2 1894 aa4.1□□□□□ -1.75
PTP4A1-205ENST00000626021 A0A075B6Q4 140 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 ELOVL7A1L3X0 281 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 MROH6A6NGR9 719 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 MANSC4A6NHS7 340 aaPredicted RBP4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 A8MU76 341 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 WASH4PA8MWX3 477 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 FAM220BPB1ANY3 271 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 FAM25AB3EWG3 89 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 FAM25CB3EWG5 89 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 FAM25GB3EWG6 89 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 H3BMM5 538 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 I6L893 689 aaPredicted RBP4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 MSTNO14793 375 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 TBX1O43435 398 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 NOBOXO60393 691 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 DFNA5O60443 496 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 MAFKO60675 156 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 DPM1O60762 260 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 RECQL5O94762 991 aaPredicted RBP4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 MT-CYBP00156 380 aaPredicted RBP4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 MT-CO1P00395 513 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 MYCP01106 439 aaPredicted RBP4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 LINC00032P0C843 101 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 ZNF865P0CJ78 1059 aaPredicted RBP4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 SPNP16150 400 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 ITGA2P17301 1181 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 OGNP20774 298 aaKnown RBP4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 LMO2P25791 158 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 PKLRP30613 574 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 S100A5P33763 92 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 NUDT1P36639 197 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 MAGEA2P43356 314 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 PPP3CCP48454 512 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 NRIP1P48552 1158 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 CLK3P49761 638 aaKnown RBP4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 SERPINH1P50454 418 aaKnown RBP4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 CLCNKBP51801 687 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 P2RX3P56373 397 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 NCS1P62166 190 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 TIAL1Q01085 375 aaKnown RBP eCLIP4.09□□□□□ -1.753e-7■■■□□ 17.8
PTP4A1-205ENST00000626021 IL5RAQ01344 420 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 RIPPLY1Q0D2K3 151 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 EIF4EBP2Q13542 120 aaPredicted RBP4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 RAPSNQ13702 412 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 GALNT3Q14435 633 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 MAD2L1BPQ15013 274 aaPredicted RBP4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 TRIP4Q15650 581 aaPredicted RBP4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 RUNDC3AQ59EK9 446 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 XKR4Q5GH76 650 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 FBXO47Q5MNV8 452 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 C6orf136Q5SQH8 315 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 ATG9BQ674R7 924 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 KDM4DQ6B0I6 523 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 SYCE2Q6PIF2 218 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 LYPD8Q6UX82 237 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 PAQR9Q6ZVX9 377 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 DET1Q7L5Y6 550 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 GPR149Q86SP6 731 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms