RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 STRA6Q9BX79 667 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 ZDHHC7Q9NXF8 308 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 SUCOQ9UBS9 1254 aaKnown RBP9.07□□□□□ -0.96
GGA3-223ENST00000621870 CORO2BQ9UQ03 480 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 ZBTB42B2RXF5 422 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 PGLSO95336 258 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 ADH1BP00325 375 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 CST1P01037 141 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 MT-ND1P03886 318 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 BDKRB1P46663 353 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 RPL26P61254 145 aaKnown RBP9.07□□□□□ -0.96
GGA3-223ENST00000621870 KCNJ2P63252 427 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 FAM174BQ3ZCQ3 159 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 WASHC2DQ5SRD0 308 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 ZNF605Q86T29 641 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 RASGRP3Q8IV61 690 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 CADM2Q8N3J6 435 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 KLHDC9Q8NEP7 349 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 PPP1R14AQ96A00 147 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 RNFT2Q96EX2 444 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 LENG8Q96PV6 779 aaPredicted RBP9.07□□□□□ -0.96
GGA3-223ENST00000621870 MMADHCQ9H3L0 296 aaPredicted RBP9.07□□□□□ -0.96
GGA3-223ENST00000621870 RC3H2Q9HBD1 1191 aaKnown RBP9.07□□□□□ -0.96
GGA3-223ENST00000621870 FZD3Q9NPG1 666 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 ZCCHC3Q9NUD5 404 aaKnown RBP9.07□□□□□ -0.96
GGA3-223ENST00000621870 MRTO4Q9UKD2 239 aaKnown RBP9.07□□□□□ -0.96
GGA3-223ENST00000621870 RPL26L1Q9UNX3 145 aaKnown RBP9.07□□□□□ -0.96
GGA3-223ENST00000621870 RUVBL1Q9Y265 456 aaKnown RBP9.07□□□□□ -0.96
GGA3-223ENST00000621870 TRPM3Q9HCF6 1732 aaPredicted RBP9.07□□□□□ -0.96
GGA3-223ENST00000621870 TAF1P21675 1872 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 DHRS12A0PJE2 317 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 IGLON5A6NGN9 336 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 HIDE1A8MVS5 230 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 ECI2O75521 394 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 CSTF2P33240 577 aaKnown RBP eCLIP9.07□□□□□ -0.96
GGA3-223ENST00000621870 HNF1BP35680 557 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 HK2P52789 917 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 RGS8P57771 180 aaPredicted RBP9.07□□□□□ -0.96
GGA3-223ENST00000621870 SPIBQ01892 262 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 ZNF33AQ06730 810 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 TNK2Q07912 1038 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 DGCR6Q14129 220 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 KCNJ11Q14654 390 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 XKR4Q5GH76 650 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 RNF43Q68DV7 783 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 SPATA19Q7Z5L4 167 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 SCD5Q86SK9 330 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 KIAA2013Q8IYS2 634 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 LIX1Q8N485 282 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 SETD9Q8NE22 299 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 FAM3CQ92520 227 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 KAT2AQ92830 837 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 TSGA13Q96PP4 275 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 CEP44Q9C0F1 390 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 TFB2MQ9H5Q4 396 aaKnown RBP9.07□□□□□ -0.96
GGA3-223ENST00000621870 KLHL1Q9NR64 748 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 ADGRE2Q9UHX3 823 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 LZTS1Q9Y250 596 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 C9J4A7 227 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 CLPTM1O96005 669 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 ITGA2P17301 1181 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 POLR2CP19387 275 aaPredicted RBP9.06□□□□□ -0.96
GGA3-223ENST00000621870 CCR8P51685 355 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 NEK2P51955 445 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 STC1P52823 247 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 RPS14P62263 151 aaKnown RBP9.06□□□□□ -0.96
GGA3-223ENST00000621870 NEDD8Q15843 81 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 AGTRAPQ6RW13 159 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 LPCAT2Q7L5N7 544 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 GPR141Q7Z602 305 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 SMYD1Q8NB12 490 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 PHOSPHO2Q8TCD6 241 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 SIGLEC10Q96LC7 697 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 SLC46A2Q9BY10 475 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 SLC2A11Q9BYW1 496 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 XKR8Q9H6D3 395 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 PCDHGB3Q9Y5G1 929 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 MCIDASD6RGH6 385 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 MID1O15344 667 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 B3GALT2O43825 422 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 OR6B1O95007 311 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 SEC24AO95486 1093 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 CASP9P55211 416 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 SMIM11AP58511 58 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 RPS21P63220 83 aaKnown RBP9.06□□□□□ -0.96
GGA3-223ENST00000621870 RALGPS1Q5JS13 557 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 CLNKQ7Z7G1 428 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 FAM110BQ8TC76 370 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 ANKRD49Q8WVL7 239 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 GLYATL1Q969I3 302 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 PLAGL1Q9UM63 463 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 CLCA3PQ9Y6N3 262 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 STON1Q9Y6Q2 735 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 MYO10Q9HD67 2058 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 PLK4O00444 970 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 MAGEA10P43363 369 aaPredicted RBP9.06□□□□□ -0.96
GGA3-223ENST00000621870 PRR5P85299 388 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 PTSQ03393 145 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 SLC10A2Q12908 348 aaPredicted RBP9.06□□□□□ -0.96
GGA3-223ENST00000621870 CCINQ13939 588 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms