RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 STOML1Q9UBI4 398 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 DKK3Q9UBP4 350 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 SUN2Q9UH99 717 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 POMPQ9Y244 141 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 RNF11Q9Y3C5 154 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 PRKAB1Q9Y478 270 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 AGAP14A8MT82 685 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 K7EPI3 171 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 ATG13O75143 517 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 ADSLP30566 484 aaPredicted RBP9.72□□□□□ -0.85
VTA1-205ENST00000620996 ACTR3P61158 418 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 DLX2Q07687 328 aaPredicted RBP9.72□□□□□ -0.85
VTA1-205ENST00000620996 GTF2H3Q13889 308 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 HERC3Q15034 1050 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 PCBP2Q15366 365 aaKnown RBP eCLIP9.72□□□□□ -0.852e-6■□□□□ 10.9
VTA1-205ENST00000620996 LRRC36Q1X8D7 754 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 C2orf27AQ580R0 203 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 LDLRAP1Q5SW96 308 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.72□□□□□ -0.85
VTA1-205ENST00000620996 CHSY3Q70JA7 882 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 OR2T11Q8NH01 316 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 HMGCLL1Q8TB92 370 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 MIPOL1Q8TD10 442 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 MCOLN3Q8TDD5 553 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 TRMT61BQ9BVS5 477 aaKnown RBP9.72□□□□□ -0.85
VTA1-205ENST00000620996 NUSAP1Q9BXS6 441 aaKnown RBP9.72□□□□□ -0.85
VTA1-205ENST00000620996 NDE1Q9NXR1 346 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 PTBP2Q9UKA9 531 aaKnown RBP9.72□□□□□ -0.85
VTA1-205ENST00000620996 PPM1HQ9ULR3 514 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 PIKFYVEQ9Y2I7 2098 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 LOC730098B7Z3J9 87 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 NDUFB5O43674 189 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 NRP2O60462 931 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 TBX10O75333 385 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 PCCBP05166 539 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 CBSLP0DN79 551 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 SLC2A4P14672 509 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 CBSP35520 551 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 HALP42357 657 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 BDKRB1P46663 353 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 KCNK10P57789 538 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 RPL38P63173 70 aaKnown RBP9.72□□□□□ -0.85
VTA1-205ENST00000620996 HMGCS1Q01581 520 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 CNTN1Q12860 1018 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 FLOT2Q14254 428 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 ABRAXAS2Q15018 415 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 ANO7Q6IWH7 933 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 NUDT18Q6ZVK8 323 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 ERN2Q76MJ5 926 aaKnown RBP9.72□□□□□ -0.85
VTA1-205ENST00000620996 NANOGNBQ7Z5D8 188 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 CFAP206Q8IYR0 622 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 PGAM4Q8N0Y7 254 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 KLK6Q92876 244 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 PARVBQ9HBI1 364 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 FARSBQ9NSD9 589 aaKnown RBP9.72□□□□□ -0.85
VTA1-205ENST00000620996 ANGPTL2Q9UKU9 493 aa9.72□□□□□ -0.85
VTA1-205ENST00000620996 POLR3HQ9Y535 204 aaPredicted RBP9.72□□□□□ -0.85
VTA1-205ENST00000620996 C2orf16Q68DN1 1984 aa9.71□□□□□ -0.85
VTA1-205ENST00000620996 TSPAN11A1L157 253 aa9.71□□□□□ -0.85
VTA1-205ENST00000620996 VPS4BO75351 444 aa9.71□□□□□ -0.85
VTA1-205ENST00000620996 IDO1P14902 403 aa9.71□□□□□ -0.85
VTA1-205ENST00000620996 XRCC1P18887 633 aaPredicted RBP9.71□□□□□ -0.85
VTA1-205ENST00000620996 SLC34A1Q06495 639 aa9.71□□□□□ -0.85
VTA1-205ENST00000620996 CAPRIN1Q14444 709 aaKnown RBP9.71□□□□□ -0.85
VTA1-205ENST00000620996 C16orf87Q6PH81 154 aa9.71□□□□□ -0.85
VTA1-205ENST00000620996 TRMT11Q7Z4G4 463 aaKnown RBP9.71□□□□□ -0.85
VTA1-205ENST00000620996 TECPR1Q7Z6L1 1165 aa9.71□□□□□ -0.85
VTA1-205ENST00000620996 SPATA24Q86W54 205 aa9.71□□□□□ -0.85
VTA1-205ENST00000620996 PPFIBP2Q8ND30 876 aa9.71□□□□□ -0.85
VTA1-205ENST00000620996 VPS33AQ96AX1 596 aa9.71□□□□□ -0.85
VTA1-205ENST00000620996 DTD2Q96FN9 168 aa9.71□□□□□ -0.85
VTA1-205ENST00000620996 FAM129BQ96TA1 746 aa9.71□□□□□ -0.85
VTA1-205ENST00000620996 P2RY13Q9BPV8 354 aa9.71□□□□□ -0.85
VTA1-205ENST00000620996 ARPC5LQ9BPX5 153 aa9.71□□□□□ -0.85
VTA1-205ENST00000620996 TMEM98Q9Y2Y6 226 aa9.71□□□□□ -0.85
VTA1-205ENST00000620996 MID1O15344 667 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 C8GP07360 202 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 GPX3P22352 226 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 DCDC1P59894 354 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 NAA20P61599 178 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 UFM1P61960 85 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 DDX39BQ13838 428 aaKnown RBP9.71□□□□□ -0.86
VTA1-205ENST00000620996 KCNC3Q14003 757 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 PTCHD3Q3KNS1 767 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 ITPRIPL2Q3MIP1 535 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 DDHD1Q8NEL9 900 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 C19orf43Q9BQ61 176 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 C1QTNF3Q9BXJ4 246 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 TRIM8Q9BZR9 551 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 PRSS16Q9NQE7 514 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 MRGBPQ9NV56 204 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 CROTQ9UKG9 612 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 ZNF490Q9ULM2 529 aaPredicted RBP9.71□□□□□ -0.86
VTA1-205ENST00000620996 SLC22A14Q9Y267 594 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 STON1Q9Y6Q2 735 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 IGLV3-16A0A075B6K0 115 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 E7ENX8 843 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 FBP2O00757 339 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 KPNA5O15131 536 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 RNASEH1O60930 286 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms