RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 ADAMTSL2Q86TH1 951 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 ZFP28Q8NHY6 868 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 OR52E6Q96RD3 313 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 DGCR6LQ9BY27 220 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 MTG2Q9H4K7 406 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 SGK2Q9HBY8 427 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 TNFRSF12AQ9NP84 129 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 GMPR2Q9P2T1 348 aaKnown RBP8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 TRAF6Q9Y4K3 522 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 TTC3P53804 2025 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 PRORSD1PA6NEY8 169 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 NIPSNAP2O75323 286 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 ZBTB11O95625 1053 aaPredicted RBP8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 POP4O95707 220 aaKnown RBP8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 PRNPP04156 253 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 CHRM5P08912 532 aaPredicted RBP8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 CYP4B1P13584 511 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 FASP25445 335 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 STK19P49842 368 aaPredicted RBP8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 CLCN5P51795 746 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 OC90Q02509 493 aaPredicted RBP8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 CREMQ03060 361 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 SQLEQ14534 574 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 HERC3Q15034 1050 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 GPR180Q86V85 440 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 PIM3Q86V86 326 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 CYP4Z1Q86W10 505 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 ZNF557Q8N988 423 aaPredicted RBP8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 TSPAN14Q8NG11 270 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 DOK4Q8TEW6 326 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 ASB9Q96DX5 294 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 HAPLN3Q96S86 360 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 SH3GL1Q99961 368 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 SNX6Q9UNH7 406 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 Q9Y3F1 56 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 UNC13CQ8NB66 2214 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 NOTCH3Q9UM47 2321 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 LOC100506127A0A0U1RQW1 187 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 PIPSLA2A3N6 862 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 H3BSA7 217 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 SYN3O14994 580 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 MATN3O15232 486 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 SLC22A2O15244 555 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 INSIG1O15503 277 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 CLOCKO15516 846 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 NRP2O60462 931 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 MAFKO60675 156 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 APOA1P02647 267 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 GBAP04062 536 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 NT5EP21589 574 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 PAICSP22234 425 aaKnown RBP8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 MASP1P48740 699 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 MAPK11Q15759 364 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 CYP27C1Q4G0S4 372 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 FAM98BQ52LJ0 330 aaKnown RBP8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 HECTD2Q5U5R9 776 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 FAM45BPQ6NSW5 357 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 DEF8Q6ZN54 512 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 HEATR4Q86WZ0 1026 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 WDR36Q8NI36 951 aaKnown RBP8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 FAM45AQ8TCE6 357 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 ZNF419Q96HQ0 510 aaPredicted RBP8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 GPR78Q96P69 363 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 CDK15Q96Q40 435 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 DEPDC7Q96QD5 511 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 REXO4Q9GZR2 422 aaKnown RBP8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 TLR9Q9NR96 1032 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 TMEM98Q9Y2Y6 226 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 PCDHGA7Q9Y5G6 932 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 TNPO3Q9Y5L0 923 aaKnown RBP8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 PRSS51A0A1B0GVH4 220 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 FAM149AA5PLN7 773 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 LRRC72A6NJI9 287 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 RFXANKO14593 260 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 MATN4O95460 622 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 GOT2P00505 430 aaKnown RBP8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 LDLRP01130 860 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 CAPN1P07384 714 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 SLC10A3P09131 477 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 ZNF10P21506 573 aaPredicted RBP8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 RAD23AP54725 363 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 FRG1Q14331 258 aaKnown RBP8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 ADGRF1Q5T601 910 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 CRTC1Q6UUV9 634 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 AHI1Q8N157 1196 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 TTC9BQ8N6N2 239 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 SIDT2Q8NBJ9 832 aaKnown RBP8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 C2CD4AQ8NCU7 369 aaPredicted RBP8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 OR52J3Q8NH60 311 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 PXYLP1Q8TE99 480 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 SCAMP4Q969E2 229 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 SLC25A23Q9BV35 468 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 TPSD1Q9BZJ3 242 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 IPPKQ9H8X2 491 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 SLCO3A1Q9UIG8 710 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 PTGDR2Q9Y5Y4 395 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 A0A0D9SEW6 157 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 MBLAC1A4D2B0 266 aaPredicted RBP8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 TARM1B6A8C7 271 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 PRR23D1E9PI22 279 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms