RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 NPTX1Q15818 432 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 CTF1Q16619 201 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 TTLL9Q3SXZ7 439 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 SOWAHCQ53LP3 525 aaPredicted RBP6.84□□□□□ -1.31
NEDD9-216ENST00000620854 ARHGAP15Q53QZ3 475 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 THOC7Q6I9Y2 204 aaKnown RBP6.84□□□□□ -1.31
NEDD9-216ENST00000620854 GDF6Q6KF10 455 aaPredicted RBP6.84□□□□□ -1.31
NEDD9-216ENST00000620854 KIAA0408Q6ZU52 694 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 USP51Q70EK9 711 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 YAF2Q8IY57 180 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 CARNMT1Q8N4J0 409 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 TOP6BLQ8N6T0 577 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 OR2T12Q8NG77 320 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 FKBP10Q96AY3 582 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 TMEM209Q96SK2 561 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 C16orf70Q9BSU1 422 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 REXO4Q9GZR2 422 aaKnown RBP6.84□□□□□ -1.31
NEDD9-216ENST00000620854 GPN2Q9H9Y4 310 aaPredicted RBP6.84□□□□□ -1.31
NEDD9-216ENST00000620854 TLR8Q9NR97 1041 aaKnown RBP6.84□□□□□ -1.31
NEDD9-216ENST00000620854 COMMD8Q9NX08 183 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 POLR3HQ9Y535 204 aaPredicted RBP6.84□□□□□ -1.31
NEDD9-216ENST00000620854 NOX1Q9Y5S8 564 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 ZNF99A8MXY4 864 aaPredicted RBP6.84□□□□□ -1.32
NEDD9-216ENST00000620854 UPK1AO00322 258 aa6.84□□□□□ -1.32
NEDD9-216ENST00000620854 LZTS3O60299 673 aaPredicted RBP6.84□□□□□ -1.32
NEDD9-216ENST00000620854 UGT2B11O75310 529 aa6.84□□□□□ -1.32
NEDD9-216ENST00000620854 ECI2O75521 394 aa6.84□□□□□ -1.32
NEDD9-216ENST00000620854 DNTTP04053 509 aa6.84□□□□□ -1.32
NEDD9-216ENST00000620854 RHOCP08134 193 aa6.84□□□□□ -1.32
NEDD9-216ENST00000620854 RAP2AP10114 183 aa6.84□□□□□ -1.32
NEDD9-216ENST00000620854 GSTM2P28161 218 aa6.84□□□□□ -1.32
NEDD9-216ENST00000620854 EPHA2P29317 976 aa6.84□□□□□ -1.32
NEDD9-216ENST00000620854 IDH2P48735 452 aaKnown RBP6.84□□□□□ -1.32
NEDD9-216ENST00000620854 RHOAP61586 193 aa6.84□□□□□ -1.32
NEDD9-216ENST00000620854 MRPL28Q13084 256 aaKnown RBP6.84□□□□□ -1.32
NEDD9-216ENST00000620854 LCP2Q13094 533 aa6.84□□□□□ -1.32
NEDD9-216ENST00000620854 DGUOKQ16854 277 aa6.84□□□□□ -1.32
NEDD9-216ENST00000620854 C6orf136Q5SQH8 315 aa6.84□□□□□ -1.32
NEDD9-216ENST00000620854 PHYKPLQ8IUZ5 450 aa6.84□□□□□ -1.32
NEDD9-216ENST00000620854 HID1Q8IV36 788 aa6.84□□□□□ -1.32
NEDD9-216ENST00000620854 SLC22A15Q8IZD6 547 aa6.84□□□□□ -1.32
NEDD9-216ENST00000620854 NTAN1Q96AB6 310 aa6.84□□□□□ -1.32
NEDD9-216ENST00000620854 SLC9A7Q96T83 725 aa6.84□□□□□ -1.32
NEDD9-216ENST00000620854 GPR21Q99679 349 aa6.84□□□□□ -1.32
NEDD9-216ENST00000620854 BARD1Q99728 777 aaKnown RBP6.84□□□□□ -1.32
NEDD9-216ENST00000620854 TUBA1CQ9BQE3 449 aa6.84□□□□□ -1.32
NEDD9-216ENST00000620854 HTATIP2Q9BUP3 242 aa6.84□□□□□ -1.32
NEDD9-216ENST00000620854 NFKBIZQ9BYH8 718 aa6.84□□□□□ -1.32
NEDD9-216ENST00000620854 IKZF5Q9H5V7 419 aa6.84□□□□□ -1.32
NEDD9-216ENST00000620854 CNGB3Q9NQW8 809 aa6.84□□□□□ -1.32
NEDD9-216ENST00000620854 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.84□□□□□ -1.325e-7■■■□□ 17.8
NEDD9-216ENST00000620854 TMED5Q9Y3A6 229 aa6.84□□□□□ -1.32
NEDD9-216ENST00000620854 NT5C1B-RDH14C9J2C7 533 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 RECQL5O94762 991 aaPredicted RBP6.83□□□□□ -1.32
NEDD9-216ENST00000620854 TBX18O95935 607 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 B3GALT4O96024 378 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 LCKP06239 509 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 GSTM1P09488 218 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 OR4Q2P0C623 313 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 VEGFBP49765 207 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 TBX4P57082 545 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 HMGCS1Q01581 520 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 BOP1Q14137 746 aaKnown RBP6.83□□□□□ -1.32
NEDD9-216ENST00000620854 FAM214AQ32MH5 1076 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 SIRPB2Q5JXA9 342 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 ATAD3BQ5T9A4 648 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 RSBN1Q5VWQ0 802 aaPredicted RBP6.83□□□□□ -1.32
NEDD9-216ENST00000620854 TMC5Q6UXY8 1006 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 PLEKHG7Q6ZR37 379 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 AHSA2Q719I0 299 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 MCFD2Q8NI22 146 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 PNPT1Q8TCS8 783 aaKnown RBP6.83□□□□□ -1.32
NEDD9-216ENST00000620854 STON2Q8WXE9 905 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 ZHX1-C8orf76Q96EF9 292 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 HMCESQ96FZ2 354 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 DMRTB1Q96MA1 342 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 SEMA3CQ99985 751 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 GDAP2Q9NXN4 497 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 GMIPQ9P107 970 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 DPP7Q9UHL4 492 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 ZNF225Q9UK10 706 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 FBXO10Q9UK96 956 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 PRMT5O14744 637 aaPredicted RBP6.83□□□□□ -1.32
NEDD9-216ENST00000620854 OR1I1O60431 355 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 FAM20BO75063 409 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 TSC22D2O75157 780 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 CAPN1P07384 714 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 MYCLP1P12525 358 aaPredicted RBP6.83□□□□□ -1.32
NEDD9-216ENST00000620854 ADRA1AP35348 466 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 SCNN1AP37088 669 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 GDF5P43026 501 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 HTRA3P83110 453 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 RCAN2Q14206 197 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 PTPRNQ16849 979 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 FAM174BQ3ZCQ3 159 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 RFTN2Q52LD8 501 aaPredicted RBP6.83□□□□□ -1.32
NEDD9-216ENST00000620854 ZNF621Q6ZSS3 439 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 ANKS3Q6ZW76 656 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 P2RY8Q86VZ1 359 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 COLGALT2Q8IYK4 626 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms